BLASTX nr result

ID: Cephaelis21_contig00006404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006404
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33697.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_003516618.1| PREDICTED: cyclin-D5-1-like [Glycine max]          73   3e-11
ref|XP_002525266.1| cyclin d, putative [Ricinus communis] gi|223...    71   1e-10
ref|XP_002303399.1| predicted protein [Populus trichocarpa] gi|1...    67   2e-09
gb|AEV41136.1| D5-type cyclin [Populus x canadensis]                   66   3e-09

>emb|CBI33697.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
 Frame = +3

Query: 213 CEEDQACFNLYD-DGDENLRHCCTAEHNDEFLERLIDKEASYLMQNDRESNFFLFNMEEV 389
           C+E++ACF   + D   NL  C  ++  DE+++ L+ +E    M +D  S   + N   +
Sbjct: 18  CQENEACFGEEEQDQYMNLDPCLFSQSEDEYIQSLVKRETKSTMSSDNRS---ITNQSWL 74

Query: 390 LSISARLDAVEWILNTRTSFGFHKKTAYLSLLYFDRFLSERSV 518
               ARLD+++W+LNTR  FGF  +TAYL + YFD FLS RS+
Sbjct: 75  KR--ARLDSIKWVLNTRAFFGFQYRTAYLCVAYFDLFLSRRSI 115


>ref|XP_003516618.1| PREDICTED: cyclin-D5-1-like [Glycine max]
          Length = 321

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 45/115 (39%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
 Frame = +3

Query: 213 CEEDQACFNLYDDGDENL-------RHCCTAEHNDEFLERLIDKEASYLMQN------DR 353
           C+E+     L+ D DEN          C   E  +E++E L  +E  +  QN      D 
Sbjct: 17  CDEEGEA-RLFKDQDENPGIFYSLDNSCFVLEDEEEYIEYLFKQETGFRSQNHHFFTSDD 75

Query: 354 ESNFFLFNMEEVLSISARLDAVEWILNTRTSFGFHKKTAYLSLLYFDRFLSERSV 518
            SN            SAR+DA++WILNT+  FGF  +TAYLS+ YFDRFLS+RS+
Sbjct: 76  HSNRHWLR-------SARVDAIDWILNTQAKFGFKVETAYLSVTYFDRFLSKRSI 123


>ref|XP_002525266.1| cyclin d, putative [Ricinus communis] gi|223535424|gb|EEF37094.1|
           cyclin d, putative [Ricinus communis]
          Length = 268

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 10/112 (8%)
 Frame = +3

Query: 213 CEEDQA-CFNL--------YDDGDENLRHCCTAEHND-EFLERLIDKEASYLMQNDRESN 362
           C+ED A CFN         ++    +   C   E+ + E++E++++ E+     +D +S+
Sbjct: 15  CQEDDASCFNENNSFQELNFESSSSSSSSCFVLENEEIEYIEKMVEMESRSFTCSD-DSS 73

Query: 363 FFLFNMEEVLSISARLDAVEWILNTRTSFGFHKKTAYLSLLYFDRFLSERSV 518
           F  ++        ARLDA++WI NTR  FGF   TAYLS+ YFDRFLS+RS+
Sbjct: 74  FANYSWLRC----ARLDAIDWIFNTRAIFGFRFHTAYLSVTYFDRFLSKRSI 121


>ref|XP_002303399.1| predicted protein [Populus trichocarpa]
           gi|159025723|emb|CAN88862.1| D5-type cyclin [Populus
           trichocarpa] gi|222840831|gb|EEE78378.1| predicted
           protein [Populus trichocarpa]
          Length = 337

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 7/109 (6%)
 Frame = +3

Query: 213 CEEDQACF-NLYDDGDENLRHCCT-----AEHNDEFLERLIDKEA-SYLMQNDRESNFFL 371
           C E+++CF N       N++H  +      E + E++E+L+++E  ++  +     +  L
Sbjct: 15  CHENESCFFNDSISDHSNIKHDRSRFGLETEVDVEYVEKLVERETITFGYRCHASFDDCL 74

Query: 372 FNMEEVLSISARLDAVEWILNTRTSFGFHKKTAYLSLLYFDRFLSERSV 518
                 L   ARLDA+EWILNTR  +GF   TAYLS+ YFDRF+S+RS+
Sbjct: 75  ITSHNWLKF-ARLDAIEWILNTRAIYGFRFHTAYLSVTYFDRFVSKRSI 122


>gb|AEV41136.1| D5-type cyclin [Populus x canadensis]
          Length = 337

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 7/109 (6%)
 Frame = +3

Query: 213 CEEDQACF-NLYDDGDENLRHCCT-----AEHNDEFLERLIDKEA-SYLMQNDRESNFFL 371
           C E+++CF N       N++H  +      E + E++E+L+++E  ++  +     +  L
Sbjct: 15  CYENESCFFNDSISDHSNIKHDQSRFGLETEVDVEYVEKLVERETITFGYRCHASFDDCL 74

Query: 372 FNMEEVLSISARLDAVEWILNTRTSFGFHKKTAYLSLLYFDRFLSERSV 518
                 L   ARLDA+EWILNTR  +GF   TAYLS+ YFDRF+S+RS+
Sbjct: 75  ITSHNWLKF-ARLDAIEWILNTRAIYGFRFHTAYLSVTYFDRFVSKRSI 122


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