BLASTX nr result

ID: Cephaelis21_contig00006402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006402
         (1053 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521592.1| AP-3 complex subunit sigma-1, putative [Rici...   246   7e-63
ref|XP_002266832.1| PREDICTED: AP-3 complex subunit sigma [Vitis...   243   7e-62
ref|XP_002310231.1| predicted protein [Populus trichocarpa] gi|2...   240   5e-61
gb|AFK43698.1| unknown [Medicago truncatula]                          238   2e-60
ref|XP_002327801.1| predicted protein [Populus trichocarpa] gi|2...   236   9e-60

>ref|XP_002521592.1| AP-3 complex subunit sigma-1, putative [Ricinus communis]
           gi|223539270|gb|EEF40863.1| AP-3 complex subunit
           sigma-1, putative [Ricinus communis]
          Length = 166

 Score =  246 bits (628), Expect = 7e-63
 Identities = 121/166 (72%), Positives = 148/166 (89%), Gaps = 1/166 (0%)
 Frame = -3

Query: 874 MIKAVIVMNDQGKPRLVKFYTFQALEKQQELIRSIYGVLCSRANNVSNFIKMDSLFGPDI 695
           MIKAV+VMN QGKPRL KFY F ++EKQQELIRS++GVLCSRA NVSNF++ DS+FGPD 
Sbjct: 1   MIKAVLVMNTQGKPRLAKFYDFLSVEKQQELIRSVFGVLCSRAENVSNFMEADSIFGPDS 60

Query: 694 RLVCKTFATLYFVFVFDSSENELAMLDLMQVFVGTLDKCFHNVCELDIIFNFNKVHTILD 515
           RLV K +ATLYFVFV+DS ENELA+LDL+QVFV TLDKCF NVCELDI+FN++K+HTILD
Sbjct: 61  RLVYKHYATLYFVFVYDSCENELAVLDLIQVFVETLDKCFRNVCELDIVFNYSKLHTILD 120

Query: 514 EIILGGQVLETNSSEVVKAVEEISKMEKNATSILLVP-SISSWSSR 380
           EII GGQVLET+S+EV+KAVEEISK+E ++ S+ LVP +++SW +R
Sbjct: 121 EIIFGGQVLETSSTEVMKAVEEISKLEASSYSMTLVPKTVASWRNR 166


>ref|XP_002266832.1| PREDICTED: AP-3 complex subunit sigma [Vitis vinifera]
           gi|297735157|emb|CBI17519.3| unnamed protein product
           [Vitis vinifera]
          Length = 165

 Score =  243 bits (619), Expect = 7e-62
 Identities = 122/165 (73%), Positives = 142/165 (86%), Gaps = 1/165 (0%)
 Frame = -3

Query: 874 MIKAVIVMNDQGKPRLVKFYTFQALEKQQELIRSIYGVLCSRANNVSNFIKMDSLFGPDI 695
           MI+AVIVMN QGKPRL KFY +   EKQQELIR ++GVLCSRA NVSNF++ DS+FGPD 
Sbjct: 1   MIRAVIVMNTQGKPRLTKFYDYMPPEKQQELIRRVFGVLCSRAENVSNFVEADSVFGPDT 60

Query: 694 RLVCKTFATLYFVFVFDSSENELAMLDLMQVFVGTLDKCFHNVCELDIIFNFNKVHTILD 515
           RLV K +ATLYFVFVFDSSENELAMLDL+QV V TLDKCF NVCELDI+FN++K+HTILD
Sbjct: 61  RLVYKHYATLYFVFVFDSSENELAMLDLIQVLVETLDKCFKNVCELDIVFNYSKLHTILD 120

Query: 514 EIILGGQVLETNSSEVVKAVEEISKMEKNATSILLVP-SISSWSS 383
           EII GGQVLET+S+EV+KAVEEIS++E  + +I LVP SIS W S
Sbjct: 121 EIIFGGQVLETSSAEVMKAVEEISRLETASNTITLVPKSISGWRS 165


>ref|XP_002310231.1| predicted protein [Populus trichocarpa] gi|222853134|gb|EEE90681.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score =  240 bits (612), Expect = 5e-61
 Identities = 119/166 (71%), Positives = 143/166 (86%), Gaps = 1/166 (0%)
 Frame = -3

Query: 874 MIKAVIVMNDQGKPRLVKFYTFQALEKQQELIRSIYGVLCSRANNVSNFIKMDSLFGPDI 695
           MIKAV+V+N QGKPRL KFY F  +EKQQELIR ++GVLC+RA  VSNF+++DS+FGPD 
Sbjct: 1   MIKAVLVINTQGKPRLTKFYDFLTVEKQQELIRGVFGVLCTRAEKVSNFMEVDSIFGPDS 60

Query: 694 RLVCKTFATLYFVFVFDSSENELAMLDLMQVFVGTLDKCFHNVCELDIIFNFNKVHTILD 515
           RLV K +ATLYFVFVFDSSENELAMLDL+QVFV TLDKCF NVCELDI+FN++K+H I+D
Sbjct: 61  RLVYKHYATLYFVFVFDSSENELAMLDLIQVFVETLDKCFRNVCELDIVFNYSKLHAIID 120

Query: 514 EIILGGQVLETNSSEVVKAVEEISKMEKNATSILLVP-SISSWSSR 380
           EII GGQVLET+S+EV++AVEEISK E  + SI LVP ++S W SR
Sbjct: 121 EIISGGQVLETSSTEVMRAVEEISKSEAASNSISLVPKTVSGWRSR 166


>gb|AFK43698.1| unknown [Medicago truncatula]
          Length = 166

 Score =  238 bits (607), Expect = 2e-60
 Identities = 116/166 (69%), Positives = 142/166 (85%), Gaps = 1/166 (0%)
 Frame = -3

Query: 874 MIKAVIVMNDQGKPRLVKFYTFQALEKQQELIRSIYGVLCSRANNVSNFIKMDSLFGPDI 695
           MI AV+VMN QGKPRL KFY F+ +EKQQE+IR+++ VLCSR  +VSNF+  +S FGPD 
Sbjct: 1   MISAVLVMNTQGKPRLAKFYEFRPVEKQQEIIRNVFAVLCSRPEHVSNFVDAESFFGPDA 60

Query: 694 RLVCKTFATLYFVFVFDSSENELAMLDLMQVFVGTLDKCFHNVCELDIIFNFNKVHTILD 515
           RLV K FATLYFVF+FD SENE AMLDL+QVFV TLDKCF NVCELD++FN++K+HTILD
Sbjct: 61  RLVYKHFATLYFVFIFDGSENEFAMLDLIQVFVETLDKCFRNVCELDVVFNYSKMHTILD 120

Query: 514 EIILGGQVLETNSSEVVKAVEEISKMEKNATSILLVP-SISSWSSR 380
           EII GGQVLET+S+EV+KAVEEI+K+E  +++I LVP S+SSW SR
Sbjct: 121 EIIFGGQVLETSSAEVLKAVEEITKLEAASSAINLVPKSVSSWRSR 166


>ref|XP_002327801.1| predicted protein [Populus trichocarpa] gi|222836886|gb|EEE75279.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score =  236 bits (601), Expect = 9e-60
 Identities = 117/166 (70%), Positives = 141/166 (84%), Gaps = 1/166 (0%)
 Frame = -3

Query: 874 MIKAVIVMNDQGKPRLVKFYTFQALEKQQELIRSIYGVLCSRANNVSNFIKMDSLFGPDI 695
           MIKAV+++N QGKPRL KFY F  +EKQQELIRS++GVLCSRA+NVSNF++ DS+FGP  
Sbjct: 1   MIKAVLIINTQGKPRLTKFYDFLTVEKQQELIRSVFGVLCSRADNVSNFMEADSIFGPGS 60

Query: 694 RLVCKTFATLYFVFVFDSSENELAMLDLMQVFVGTLDKCFHNVCELDIIFNFNKVHTILD 515
           RLV K +ATLYFVFVFDSSENELAMLDL+QVFV TLDKCF NVCE D +FN++K+HTILD
Sbjct: 61  RLVYKHYATLYFVFVFDSSENELAMLDLIQVFVETLDKCFRNVCEFDAVFNYSKLHTILD 120

Query: 514 EIILGGQVLETNSSEVVKAVEEISKMEKNATSILLVP-SISSWSSR 380
            II  GQVLET+S+EV++AVEEISK+E  + SI LVP ++S W  R
Sbjct: 121 GIIFEGQVLETSSAEVIRAVEEISKLEAASNSISLVPKTVSGWRRR 166


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