BLASTX nr result

ID: Cephaelis21_contig00006349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006349
         (2055 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283557.1| PREDICTED: general transcription factor IIE ...   406   e-110
ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|2...   399   e-108
ref|XP_002509755.1| Transcription initiation factor IIE subunit ...   381   e-103
ref|XP_004146528.1| PREDICTED: general transcription factor IIE ...   380   e-103
ref|XP_003525408.1| PREDICTED: general transcription factor IIE ...   376   e-101

>ref|XP_002283557.1| PREDICTED: general transcription factor IIE subunit 2 [Vitis
            vinifera] gi|297742556|emb|CBI34705.3| unnamed protein
            product [Vitis vinifera]
          Length = 285

 Score =  406 bits (1044), Expect = e-110
 Identities = 209/275 (76%), Positives = 227/275 (82%), Gaps = 4/275 (1%)
 Frame = +2

Query: 1043 SLQESLNKFKKQQEKCQTTLTSIAKQ----NPKVXXXXXXXXXXXXXXXXVKFSNDTERL 1210
            +LQESL KFKKQQEKCQ+TLTSIA +     P V                VKFSNDTERL
Sbjct: 2    ALQESLAKFKKQQEKCQSTLTSIAAKAGSSKPTVPQKFTPAAPTKPPTPAVKFSNDTERL 61

Query: 1211 QHINSIRKAPVGAQIKRVIDLLLERRQALDPEEINRECYVDVNANKAVFDSLKKNPKVHY 1390
            QHINSIRKAPVGAQIKRVIDLLLE RQA  PE+IN  CYVD NANKAVFDSL+ NPKV Y
Sbjct: 62   QHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEACYVDTNANKAVFDSLRNNPKVSY 121

Query: 1391 DGRRFSYKSKHDLRNKDQLLDLVRKFQEGIAVIDLKDSYPNVMQDLQALKAAGQIWLLSN 1570
            DG+RF+YKSKHDL+++ QLL LVRKF EGIAVIDLKDSYP+VM+DLQALKAAGQ+WLLSN
Sbjct: 122  DGKRFAYKSKHDLKDRSQLLVLVRKFPEGIAVIDLKDSYPSVMEDLQALKAAGQVWLLSN 181

Query: 1571 FDSQEDIAFPNDPKVPIKVDDDLKQLFRGIELPRDMLDIEKDLQKNGMKPATNTAKRRAM 1750
            FDSQEDIA+PNDP+VPIKVDDDLKQ FR IELPRDMLDIEKDLQKNGMKPATNTAKRRAM
Sbjct: 182  FDSQEDIAYPNDPRVPIKVDDDLKQFFRTIELPRDMLDIEKDLQKNGMKPATNTAKRRAM 241

Query: 1751 AQVHGVPNXXXXXXXXHEISKRTKLTNSHLLHLFQ 1855
            AQVHG+ +        HEISKRTKLTN+HL  LFQ
Sbjct: 242  AQVHGIASKSKPKKKKHEISKRTKLTNAHLPELFQ 276


>ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|222846804|gb|EEE84351.1|
            predicted protein [Populus trichocarpa]
          Length = 284

 Score =  399 bits (1025), Expect = e-108
 Identities = 205/279 (73%), Positives = 224/279 (80%), Gaps = 8/279 (2%)
 Frame = +2

Query: 1043 SLQESLNKFKKQQEKCQTTLTSIAKQNPK--------VXXXXXXXXXXXXXXXXVKFSND 1198
            +LQE L++FKKQQEKCQ+TLTSIAK  P         V                VKFSND
Sbjct: 2    ALQEQLDRFKKQQEKCQSTLTSIAKSRPSKSSLTQKTVAVAPAPSTSARTPAPAVKFSND 61

Query: 1199 TERLQHINSIRKAPVGAQIKRVIDLLLERRQALDPEEINRECYVDVNANKAVFDSLKKNP 1378
            TERLQHINSIRKAP GAQIKRVIDLLLE RQA  PE+IN  CYVD+N+NKAVFDSL+ NP
Sbjct: 62   TERLQHINSIRKAPAGAQIKRVIDLLLETRQAFTPEQINDHCYVDMNSNKAVFDSLRNNP 121

Query: 1379 KVHYDGRRFSYKSKHDLRNKDQLLDLVRKFQEGIAVIDLKDSYPNVMQDLQALKAAGQIW 1558
            KVHYDG+RFSYKSKHDL++K QLL L+RKF EGIAVIDLKDSYP+VM DLQALKA GQIW
Sbjct: 122  KVHYDGKRFSYKSKHDLKDKSQLLVLIRKFPEGIAVIDLKDSYPSVMDDLQALKAVGQIW 181

Query: 1559 LLSNFDSQEDIAFPNDPKVPIKVDDDLKQLFRGIELPRDMLDIEKDLQKNGMKPATNTAK 1738
            LLSNFDSQEDIA+PNDP++ IKVDDDLKQLFRGIELPRDMLDIEKDLQKNGMKPATNTAK
Sbjct: 182  LLSNFDSQEDIAYPNDPRMVIKVDDDLKQLFRGIELPRDMLDIEKDLQKNGMKPATNTAK 241

Query: 1739 RRAMAQVHGVPNXXXXXXXXHEISKRTKLTNSHLLHLFQ 1855
            RRA AQV G+          HEISKRTKLTN+HL  LF+
Sbjct: 242  RRAAAQVQGISTKQKAKKKKHEISKRTKLTNAHLPELFK 280


>ref|XP_002509755.1| Transcription initiation factor IIE subunit beta, putative [Ricinus
            communis] gi|223549654|gb|EEF51142.1| Transcription
            initiation factor IIE subunit beta, putative [Ricinus
            communis]
          Length = 282

 Score =  381 bits (979), Expect = e-103
 Identities = 200/278 (71%), Positives = 219/278 (78%), Gaps = 8/278 (2%)
 Frame = +2

Query: 1046 LQESLNKFKKQQEKCQTTLTSIAKQ--------NPKVXXXXXXXXXXXXXXXXVKFSNDT 1201
            LQE LNKFK+QQEKCQTTLTSIA +         PK+                VKFSNDT
Sbjct: 3    LQEQLNKFKRQQEKCQTTLTSIAAKAGSHKPSITPKIVAPSPIIPRTPGPA--VKFSNDT 60

Query: 1202 ERLQHINSIRKAPVGAQIKRVIDLLLERRQALDPEEINRECYVDVNANKAVFDSLKKNPK 1381
            ERLQHI+SIRKAPVGAQIKRVIDLL E RQA  PE+IN  CYVDVN+NKAVFDSL+ NPK
Sbjct: 61   ERLQHIHSIRKAPVGAQIKRVIDLLFETRQAFTPEQINEACYVDVNSNKAVFDSLRNNPK 120

Query: 1382 VHYDGRRFSYKSKHDLRNKDQLLDLVRKFQEGIAVIDLKDSYPNVMQDLQALKAAGQIWL 1561
            VHYDGR FSYKSKHDL++K QLL L+R+F+EGIAVIDLKD+YP VM+DLQALKAAG IWL
Sbjct: 121  VHYDGRHFSYKSKHDLKDKKQLLYLIREFKEGIAVIDLKDAYPTVMEDLQALKAAGGIWL 180

Query: 1562 LSNFDSQEDIAFPNDPKVPIKVDDDLKQLFRGIELPRDMLDIEKDLQKNGMKPATNTAKR 1741
            LSNFDSQEDIA+PNDPK  IKVDD+LK  FR IELPRDMLDIEKDLQKNGMKPATNTAKR
Sbjct: 181  LSNFDSQEDIAYPNDPKAVIKVDDELKVKFREIELPRDMLDIEKDLQKNGMKPATNTAKR 240

Query: 1742 RAMAQVHGVPNXXXXXXXXHEISKRTKLTNSHLLHLFQ 1855
            RA AQV G+           EISK+TKLTN+HL  LFQ
Sbjct: 241  RAAAQVQGISTKPKTKKKTKEISKKTKLTNAHLPELFQ 278


>ref|XP_004146528.1| PREDICTED: general transcription factor IIE subunit 2-like [Cucumis
            sativus] gi|449499921|ref|XP_004160955.1| PREDICTED:
            general transcription factor IIE subunit 2-like [Cucumis
            sativus]
          Length = 277

 Score =  380 bits (976), Expect = e-103
 Identities = 197/277 (71%), Positives = 224/277 (80%), Gaps = 6/277 (2%)
 Frame = +2

Query: 1043 SLQESLNKFKKQQEKCQTTLTSIA------KQNPKVXXXXXXXXXXXXXXXXVKFSNDTE 1204
            +LQE L++FKKQQE+CQ+TL+ IA      K  PK                 VKFSNDTE
Sbjct: 2    ALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPPAPA-VKFSNDTE 60

Query: 1205 RLQHINSIRKAPVGAQIKRVIDLLLERRQALDPEEINRECYVDVNANKAVFDSLKKNPKV 1384
            RLQHINSIRK+PVGAQIKRVIDLLLE RQA  PE+IN  CYVD+N+NKAV+DSL+ NPKV
Sbjct: 61   RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120

Query: 1385 HYDGRRFSYKSKHDLRNKDQLLDLVRKFQEGIAVIDLKDSYPNVMQDLQALKAAGQIWLL 1564
            HYDGRRFSYKSKHDL++K+QLL LVRKF EGIAVIDLKD+YP+VM+DLQALKA+GQ+WLL
Sbjct: 121  HYDGRRFSYKSKHDLKDKNQLLYLVRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180

Query: 1565 SNFDSQEDIAFPNDPKVPIKVDDDLKQLFRGIELPRDMLDIEKDLQKNGMKPATNTAKRR 1744
            SNFDSQEDIA+PNDP++ IKVDDDLKQLFR IELPRDMLD+EKDLQKNGMKPATNTAKRR
Sbjct: 181  SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 1745 AMAQVHGVPNXXXXXXXXHEISKRTKLTNSHLLHLFQ 1855
            A AQ H   +         EISKRTKLTN+HL  LF+
Sbjct: 241  ANAQ-HVASSKPKPKKKKQEISKRTKLTNAHLPELFK 276


>ref|XP_003525408.1| PREDICTED: general transcription factor IIE subunit 2-like [Glycine
            max]
          Length = 279

 Score =  376 bits (966), Expect = e-101
 Identities = 193/273 (70%), Positives = 221/273 (80%), Gaps = 2/273 (0%)
 Frame = +2

Query: 1043 SLQESLNKFKKQQEKCQTTLTSIA--KQNPKVXXXXXXXXXXXXXXXXVKFSNDTERLQH 1216
            +LQE L+KFKKQQEKCQTTL+SIA  K                     VKFSNDTERLQH
Sbjct: 2    ALQEKLDKFKKQQEKCQTTLSSIAASKAAATQKSAAHGSANGRNAAPAVKFSNDTERLQH 61

Query: 1217 INSIRKAPVGAQIKRVIDLLLERRQALDPEEINRECYVDVNANKAVFDSLKKNPKVHYDG 1396
            INSIRKAPVGAQ+KRVIDLLLE RQA  PE+IN  CYVD+ ANK VF++L+KNPKV+YDG
Sbjct: 62   INSIRKAPVGAQMKRVIDLLLETRQAFTPEQINGACYVDMKANKDVFENLRKNPKVNYDG 121

Query: 1397 RRFSYKSKHDLRNKDQLLDLVRKFQEGIAVIDLKDSYPNVMQDLQALKAAGQIWLLSNFD 1576
            +RFSYKSK+ L++K +LL L+RK+ EG+AVIDLKD+YP VM+DLQALKAAGQIWLLSNFD
Sbjct: 122  QRFSYKSKYGLKDKTELLQLIRKYPEGLAVIDLKDAYPTVMEDLQALKAAGQIWLLSNFD 181

Query: 1577 SQEDIAFPNDPKVPIKVDDDLKQLFRGIELPRDMLDIEKDLQKNGMKPATNTAKRRAMAQ 1756
            SQEDIA+PNDPKV IKVDDDLKQLFR IELPRDM+DIEKDLQKNGMKPATNTA+RR+ AQ
Sbjct: 182  SQEDIAYPNDPKVHIKVDDDLKQLFRSIELPRDMIDIEKDLQKNGMKPATNTAQRRSAAQ 241

Query: 1757 VHGVPNXXXXXXXXHEISKRTKLTNSHLLHLFQ 1855
            + G+ +         EISKRTKLTN+HL  LFQ
Sbjct: 242  IQGISSKPKPKKKKSEISKRTKLTNAHLPELFQ 274


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