BLASTX nr result
ID: Cephaelis21_contig00006342
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00006342
(1413 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 241 e-119
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 241 e-119
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 233 e-109
ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arab... 230 e-107
ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polyme... 214 e-103
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 241 bits (616), Expect(2) = e-119
Identities = 124/244 (50%), Positives = 164/244 (67%)
Frame = -3
Query: 1411 SHRPRKNYLSRYLIALLSYGGVPRCFFLDLLTTVLEETKAVFTDKRAALNVAMNSEDMDD 1232
S++PR++YLS+YLIALLSYGGVP +F++LL LE+ +V + KRAAL V++ +MDD
Sbjct: 461 SNQPRRSYLSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMDD 520
Query: 1231 AGAAIRMIFAGIPLNEPYLQKRLSVMAMSQRRLLKEGKLPINESFYLMGTADPTGLLNTN 1052
+ RMI +GIP++EP+L LS M +R+ L+ GKLP+N+ FYLMGTADPTG L ++
Sbjct: 521 S-IVTRMILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSD 579
Query: 1051 EVCVILDNGQISGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLEAVYVKELEDVIGNA 872
EVC+ILD+GQ+ G HVL A YV+ LE+ +GNA
Sbjct: 580 EVCIILDHGQVQG--------------RVLVYKHPGLHFGDIHVLNATYVEALEEFVGNA 625
Query: 871 KYGIFFSTKGCRSVASEIANGDFDGDMYWVSRNPQLLEYFSASKPWSRVHVSPPAVNKKP 692
KY IFF KG RS+A E+AN DFDGDMYWVSRN QLL+YF AS+PW R + +K+P
Sbjct: 626 KYAIFFPIKGPRSLADEMANSDFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRP 685
Query: 691 TEFS 680
T+FS
Sbjct: 686 TDFS 689
Score = 215 bits (548), Expect(2) = e-119
Identities = 105/203 (51%), Positives = 145/203 (71%), Gaps = 1/203 (0%)
Frame = -2
Query: 608 MALAADSWLVFMDRLLILGDDCAKEKDALREKMLKLVDLYYDALDAPKSGKKINIPENLR 429
+ +AAD+WLVFMDRLL L DDC+ EK+ L+ KML+L D+YYDALDAPKSG K+N+ + L+
Sbjct: 712 IGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELK 771
Query: 428 AERFPHHMEKPSSYNSTSILGEIYDKVQAFESEEHCIGALDIWKLPCFSVE-VPQKYVSL 252
AE+FPH M + SSY+STSILG+IYD V++F+ E +IW+LP F+++ VPQ +
Sbjct: 772 AEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQ--STKEIWRLPLFNIDAVPQACLRS 829
Query: 251 WTIRYKDYRRQMTAALKSDNDESRSKAADEVIKNFKQVLYEAADLEESQKDVQEIYYEAL 72
W RY YR +M AAL+ E++ + A EVI +KQ+LY AA+ EES +++++I+ EAL
Sbjct: 830 WKDRYDQYRSEMAAALQ-HGGETKDEYAAEVINKYKQILYGAAEFEESPRNLEDIFDEAL 888
Query: 71 AIYHATYNYAIKLKDVGKCGFAW 3
AIYH TY + I V C F W
Sbjct: 889 AIYHVTYEFVINGARVSYCNFPW 911
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 241 bits (616), Expect(2) = e-119
Identities = 124/244 (50%), Positives = 164/244 (67%)
Frame = -3
Query: 1411 SHRPRKNYLSRYLIALLSYGGVPRCFFLDLLTTVLEETKAVFTDKRAALNVAMNSEDMDD 1232
S++PR++YLS+YLIALLSYGGVP +F++LL LE+ +V + KRAAL V++ +MDD
Sbjct: 447 SNQPRRSYLSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMDD 506
Query: 1231 AGAAIRMIFAGIPLNEPYLQKRLSVMAMSQRRLLKEGKLPINESFYLMGTADPTGLLNTN 1052
+ RMI +GIP++EP+L LS M +R+ L+ GKLP+N+ FYLMGTADPTG L ++
Sbjct: 507 S-IVTRMILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSD 565
Query: 1051 EVCVILDNGQISGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLEAVYVKELEDVIGNA 872
EVC+ILD+GQ+ G HVL A YV+ LE+ +GNA
Sbjct: 566 EVCIILDHGQVQG--------------RVLVYKHPGLHFGDIHVLNATYVEALEEFVGNA 611
Query: 871 KYGIFFSTKGCRSVASEIANGDFDGDMYWVSRNPQLLEYFSASKPWSRVHVSPPAVNKKP 692
KY IFF KG RS+A E+AN DFDGDMYWVSRN QLL+YF AS+PW R + +K+P
Sbjct: 612 KYAIFFPIKGPRSLADEMANSDFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRP 671
Query: 691 TEFS 680
T+FS
Sbjct: 672 TDFS 675
Score = 215 bits (548), Expect(2) = e-119
Identities = 105/203 (51%), Positives = 145/203 (71%), Gaps = 1/203 (0%)
Frame = -2
Query: 608 MALAADSWLVFMDRLLILGDDCAKEKDALREKMLKLVDLYYDALDAPKSGKKINIPENLR 429
+ +AAD+WLVFMDRLL L DDC+ EK+ L+ KML+L D+YYDALDAPKSG K+N+ + L+
Sbjct: 698 IGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELK 757
Query: 428 AERFPHHMEKPSSYNSTSILGEIYDKVQAFESEEHCIGALDIWKLPCFSVE-VPQKYVSL 252
AE+FPH M + SSY+STSILG+IYD V++F+ E +IW+LP F+++ VPQ +
Sbjct: 758 AEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQ--STKEIWRLPLFNIDAVPQACLRS 815
Query: 251 WTIRYKDYRRQMTAALKSDNDESRSKAADEVIKNFKQVLYEAADLEESQKDVQEIYYEAL 72
W RY YR +M AAL+ E++ + A EVI +KQ+LY AA+ EES +++++I+ EAL
Sbjct: 816 WKDRYDQYRSEMAAALQ-HGGETKDEYAAEVINKYKQILYGAAEFEESPRNLEDIFDEAL 874
Query: 71 AIYHATYNYAIKLKDVGKCGFAW 3
AIYH TY + I V C F W
Sbjct: 875 AIYHVTYEFVINGARVSYCNFPW 897
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 233 bits (594), Expect(2) = e-109
Identities = 119/235 (50%), Positives = 161/235 (68%)
Frame = -3
Query: 1411 SHRPRKNYLSRYLIALLSYGGVPRCFFLDLLTTVLEETKAVFTDKRAALNVAMNSEDMDD 1232
S+ PR+ LS+ L+ALLSYGG+P FFLD+L LEE+K++F +K AALNVA+N +MDD
Sbjct: 500 SNPPRRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKHAALNVALNYGEMDD 559
Query: 1231 AGAAIRMIFAGIPLNEPYLQKRLSVMAMSQRRLLKEGKLPINESFYLMGTADPTGLLNTN 1052
AA +MI GIPL+EP+L+ LS++ +++ LK G+LP+ ES+YLMGT DPTG L +
Sbjct: 560 QNAA-QMILVGIPLDEPHLKNHLSILLKTEKNDLKAGRLPVTESYYLMGTVDPTGELKED 618
Query: 1051 EVCVILDNGQISGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLEAVYVKELEDVIGNA 872
EVCVIL++GQISG H+L+A YVK LE+ +GN+
Sbjct: 619 EVCVILESGQISG--------------EVLVYRNPGLHFGDIHILKATYVKALEEYVGNS 664
Query: 871 KYGIFFSTKGCRSVASEIANGDFDGDMYWVSRNPQLLEYFSASKPWSRVHVSPPA 707
KY +FF KG RS+ EIA GDFDGDMY++SRNP+LLE+F S+PW V ++PP+
Sbjct: 665 KYAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLEHFKPSEPW--VSLTPPS 717
Score = 190 bits (482), Expect(2) = e-109
Identities = 101/203 (49%), Positives = 139/203 (68%), Gaps = 1/203 (0%)
Frame = -2
Query: 608 MALAADSWLVFMDRLLILGDDCAKEKDALREKMLKLVDLYYDALDAPKSGKKINIPENLR 429
+ +AADSWL MDRLLILGD+ A+EK +++KMLKL+D+YYDALDAPK G K+ +P LR
Sbjct: 752 IGIAADSWLTIMDRLLILGDERAEEKAEMKKKMLKLIDIYYDALDAPKKGDKVYLPNELR 811
Query: 428 AERFPHHMEKPSSYNSTSILGEIYDKVQAFESEEHCIGALDIWKLPCFSVE-VPQKYVSL 252
+ FPH+ME+ + STSILG IYD V++ +EE + +I KLPCF E V + ++
Sbjct: 812 PDIFPHYMEREKKFKSTSILGLIYDFVKSQTTEEPTPSS-EISKLPCFEDEPVSEFHMEK 870
Query: 251 WTIRYKDYRRQMTAALKSDNDESRSKAADEVIKNFKQVLYEAADLEESQKDVQEIYYEAL 72
Y +YR +MT A+K+D DES A+EVI+ +KQ Y AA E+S+K ++E+Y +AL
Sbjct: 871 CRRWYDNYRSEMTQAMKTDKDES----ANEVIQRYKQEFYGAAGFEDSKKSLEELYPQAL 926
Query: 71 AIYHATYNYAIKLKDVGKCGFAW 3
+Y Y+YAI V KCGF W
Sbjct: 927 TLYKIVYDYAIH-AGVSKCGFVW 948
>ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arabidopsis thaliana]
gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 5;
Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
5 gi|330251850|gb|AEC06944.1| RNA-dependent RNA
polymerase-like protein [Arabidopsis thaliana]
Length = 977
Score = 230 bits (587), Expect(2) = e-107
Identities = 118/235 (50%), Positives = 160/235 (68%)
Frame = -3
Query: 1411 SHRPRKNYLSRYLIALLSYGGVPRCFFLDLLTTVLEETKAVFTDKRAALNVAMNSEDMDD 1232
S+ P++ LS+ L+ALLSYGG+P FFLD+L LEE+K++F +KRAALN A+N +MDD
Sbjct: 496 SNPPKRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNAALNYGEMDD 555
Query: 1231 AGAAIRMIFAGIPLNEPYLQKRLSVMAMSQRRLLKEGKLPINESFYLMGTADPTGLLNTN 1052
AA +MI GIPL+EP+L+ LS++ +++ LK GKLP+ ES+YLMGT DPTG L +
Sbjct: 556 QNAA-QMILVGIPLDEPHLKNYLSILLKTEKNDLKAGKLPVTESYYLMGTVDPTGALKED 614
Query: 1051 EVCVILDNGQISGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLEAVYVKELEDVIGNA 872
EVCVIL++GQISG H+L+A YVK LE+ +GN+
Sbjct: 615 EVCVILESGQISG--------------EVLVYRNPGLHFGDIHILKATYVKALEEYVGNS 660
Query: 871 KYGIFFSTKGCRSVASEIANGDFDGDMYWVSRNPQLLEYFSASKPWSRVHVSPPA 707
K+ +FF KG RS+ EIA GDFDGDMY++SRNP+LLE F S+PW V ++PP+
Sbjct: 661 KFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLENFKPSEPW--VSLTPPS 713
Score = 186 bits (472), Expect(2) = e-107
Identities = 98/203 (48%), Positives = 139/203 (68%), Gaps = 1/203 (0%)
Frame = -2
Query: 608 MALAADSWLVFMDRLLILGDDCAKEKDALREKMLKLVDLYYDALDAPKSGKKINIPENLR 429
+ +AADSWL MDR LILGDD A+EK +++KML+L+D+YYDALDAPK G K+ +P L+
Sbjct: 748 IGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAPKKGDKVYLPNKLK 807
Query: 428 AERFPHHMEKPSSYNSTSILGEIYDKVQAFESEEHCIGALDIWKLPCFSVE-VPQKYVSL 252
+ FPH+ME+ + STSILG I+D V++ +EE + +I KLPCF E V + ++
Sbjct: 808 PDIFPHYMERDKKFQSTSILGLIFDFVKSQTTEEPSPSS-EISKLPCFEDEPVSEFHMQK 866
Query: 251 WTIRYKDYRRQMTAALKSDNDESRSKAADEVIKNFKQVLYEAADLEESQKDVQEIYYEAL 72
+ Y +YR +MT A+K+D DES A+EVI+ +KQ Y AA E+S+K ++E+Y +AL
Sbjct: 867 CRLWYDNYRTEMTQAMKTDKDES----ANEVIQRYKQEFYGAAGFEDSKKSLEELYPQAL 922
Query: 71 AIYHATYNYAIKLKDVGKCGFAW 3
A+Y Y+YAI V KC F W
Sbjct: 923 ALYKIVYDYAIH-AGVSKCRFVW 944
>ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine max]
Length = 953
Score = 214 bits (545), Expect(2) = e-103
Identities = 113/244 (46%), Positives = 153/244 (62%)
Frame = -3
Query: 1411 SHRPRKNYLSRYLIALLSYGGVPRCFFLDLLTTVLEETKAVFTDKRAALNVAMNSEDMDD 1232
S++P++ YLS++LIALLS+GGVP FF+DLL + +E+ V+++KR+AL ++N + D+
Sbjct: 469 SNKPKRGYLSKHLIALLSFGGVPNEFFMDLLRSNMEDANHVYSNKRSALRASINCGEKDE 528
Query: 1231 AGAAIRMIFAGIPLNEPYLQKRLSVMAMSQRRLLKEGKLPINESFYLMGTADPTGLLNTN 1052
AA MI GIPL+EP+L+ LS A +++ L+ GKL + + FYLMGT DPTG L N
Sbjct: 529 YNAA-EMILCGIPLDEPFLKHHLSRFAREEKKKLRGGKLYMPDCFYLMGTVDPTGHLKKN 587
Query: 1051 EVCVILDNGQISGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLEAVYVKELEDVIGNA 872
+VC+I +N QI G H ++A YVKELE +G++
Sbjct: 588 QVCIIHENSQIVG--------------DVLVYRNPGLHFGDIHKMDATYVKELESYVGHS 633
Query: 871 KYGIFFSTKGCRSVASEIANGDFDGDMYWVSRNPQLLEYFSASKPWSRVHVSPPAVNKKP 692
KYGIFF G RSVA EIA GDFDGD YWVS +PQLL+YF PW V + KKP
Sbjct: 634 KYGIFFPRVGTRSVADEIAGGDFDGDTYWVSNHPQLLQYFRKGDPWIENSVPLDSSVKKP 693
Query: 691 TEFS 680
+EFS
Sbjct: 694 SEFS 697
Score = 190 bits (482), Expect(2) = e-103
Identities = 95/208 (45%), Positives = 140/208 (67%), Gaps = 3/208 (1%)
Frame = -2
Query: 617 SFNMALAADSWLVFMDRLLILGDDCAKE--KDALREKMLKLVDLYYDALDAPKSGKKINI 444
S+ M ++ +SW+ MDRLL L ++C E K+ ++E MLKL+D+YY+ALDAPKSG+K+ +
Sbjct: 717 SYAMGMSENSWMALMDRLLTL-NNCTNENEKERVKENMLKLIDIYYEALDAPKSGRKVQV 775
Query: 443 PENLRAERFPHHMEKPSSYNSTSILGEIYDKVQAFESEEHCIGALDIWKLPCFSVEVPQK 264
P +L AE FPH+MEK S+ STSILG IYD+V+ + E +G +IWKLPCF VEVP
Sbjct: 776 PNDLIAELFPHYMEKDKSFTSTSILGLIYDEVEIW-LENDMVG--EIWKLPCFDVEVPPS 832
Query: 263 YVSLWTIRYKDYRRQMTAALKSDNDESRSKAADEVIKNFKQVLY-EAADLEESQKDVQEI 87
+ W +Y++YR+ MT AL + + A EV + +K+ Y ++E K + +I
Sbjct: 833 CLEKWKTKYEEYRKDMTDALNLKDKSKSHEEAAEVNRKYKEEFYGPTLEMEGCLKSIGDI 892
Query: 86 YYEALAIYHATYNYAIKLKDVGKCGFAW 3
+ EALA+Y+ +Y YA+ K+V +CGFAW
Sbjct: 893 FNEALAVYNVSYEYAMLKKEVKRCGFAW 920