BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006340
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336366.1| rna-dependent RNA polymerase [Populus tricho...   144   1e-32
ref|XP_002310026.1| hypothetical protein POPTRDRAFT_562705 [Popu...   142   2e-32
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ...   141   5e-32
ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arab...   141   6e-32
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]   137   7e-31

>ref|XP_002336366.1| rna-dependent RNA polymerase [Populus trichocarpa]
           gi|222834816|gb|EEE73265.1| rna-dependent RNA polymerase
           [Populus trichocarpa]
          Length = 320

 Score =  144 bits (362), Expect = 1e-32
 Identities = 70/107 (65%), Positives = 86/107 (80%)
 Frame = +3

Query: 3   LNVAMNSEDMDDAGAAIRMIFAGIPLNEPYLQKRLSVMAMSQRRLLKEGKLPINESFYLM 182
           L VA+N  DMDD   A  MI  GIPL EPYLQ RLS++   +++ LK GK+P+ ES+YLM
Sbjct: 22  LRVALNYGDMDDNIVAT-MIGCGIPLEEPYLQCRLSILMKEEKKSLKGGKIPVPESYYLM 80

Query: 183 GTADPTGLLNTNEVCVILDNGQISGKVLVYRNPGLHFGDIHVLEAVY 323
           GTADPTGLL ++EVC+ILD GQISG+VL+YRNPGLHFGDIH+L+A Y
Sbjct: 81  GTADPTGLLESDEVCIILDCGQISGEVLIYRNPGLHFGDIHILKATY 127


>ref|XP_002310026.1| hypothetical protein POPTRDRAFT_562705 [Populus trichocarpa]
           gi|222852929|gb|EEE90476.1| hypothetical protein
           POPTRDRAFT_562705 [Populus trichocarpa]
          Length = 406

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/107 (64%), Positives = 85/107 (79%)
 Frame = +3

Query: 3   LNVAMNSEDMDDAGAAIRMIFAGIPLNEPYLQKRLSVMAMSQRRLLKEGKLPINESFYLM 182
           L VA+N  DMDD   A  MI  GIPL EPYLQ  LS++   +++ LK GK+P+ ES+YLM
Sbjct: 246 LRVALNYGDMDDNIVAT-MIGCGIPLEEPYLQHHLSILKKEEKKSLKGGKIPVPESYYLM 304

Query: 183 GTADPTGLLNTNEVCVILDNGQISGKVLVYRNPGLHFGDIHVLEAVY 323
           GTADPTGLL ++EVC+ILD GQ+SG+VLVYRNPGLHFGDIH+L+A Y
Sbjct: 305 GTADPTGLLESDEVCIILDCGQVSGEVLVYRNPGLHFGDIHILKATY 351


>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
           RNA polymerase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 981

 Score =  141 bits (356), Expect = 5e-32
 Identities = 67/107 (62%), Positives = 87/107 (81%)
 Frame = +3

Query: 3   LNVAMNSEDMDDAGAAIRMIFAGIPLNEPYLQKRLSVMAMSQRRLLKEGKLPINESFYLM 182
           LNVA+N  +MDD  AA +MI  GIPL+EP+L+  LS++  +++  LK G+LP+ ES+YLM
Sbjct: 548 LNVALNYGEMDDQNAA-QMILVGIPLDEPHLKNHLSILLKTEKNDLKAGRLPVTESYYLM 606

Query: 183 GTADPTGLLNTNEVCVILDNGQISGKVLVYRNPGLHFGDIHVLEAVY 323
           GT DPTG L  +EVCVIL++GQISG+VLVYRNPGLHFGDIH+L+A Y
Sbjct: 607 GTVDPTGELKEDEVCVILESGQISGEVLVYRNPGLHFGDIHILKATY 653


>ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arabidopsis thaliana]
           gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
           Full=Probable RNA-dependent RNA polymerase 5;
           Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
           5 gi|330251850|gb|AEC06944.1| RNA-dependent RNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 977

 Score =  141 bits (355), Expect = 6e-32
 Identities = 67/107 (62%), Positives = 86/107 (80%)
 Frame = +3

Query: 3   LNVAMNSEDMDDAGAAIRMIFAGIPLNEPYLQKRLSVMAMSQRRLLKEGKLPINESFYLM 182
           LN A+N  +MDD  AA +MI  GIPL+EP+L+  LS++  +++  LK GKLP+ ES+YLM
Sbjct: 544 LNAALNYGEMDDQNAA-QMILVGIPLDEPHLKNYLSILLKTEKNDLKAGKLPVTESYYLM 602

Query: 183 GTADPTGLLNTNEVCVILDNGQISGKVLVYRNPGLHFGDIHVLEAVY 323
           GT DPTG L  +EVCVIL++GQISG+VLVYRNPGLHFGDIH+L+A Y
Sbjct: 603 GTVDPTGALKEDEVCVILESGQISGEVLVYRNPGLHFGDIHILKATY 649


>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
          Length = 1202

 Score =  137 bits (346), Expect = 7e-31
 Identities = 62/106 (58%), Positives = 86/106 (81%)
 Frame = +3

Query: 6    NVAMNSEDMDDAGAAIRMIFAGIPLNEPYLQKRLSVMAMSQRRLLKEGKLPINESFYLMG 185
            ++++  ++MDD+    RMI +GIP++EP+LQ RLS M   +R+ L+ GKLP+N+ FYLMG
Sbjct: 825  SISLRFDEMDDS-IVTRMILSGIPIDEPFLQHRLSFMVNEERKGLRVGKLPVNDCFYLMG 883

Query: 186  TADPTGLLNTNEVCVILDNGQISGKVLVYRNPGLHFGDIHVLEAVY 323
            TADPTG L ++EVC+ILD+GQ+ G+VLVY++PGLHFGDIHVL A Y
Sbjct: 884  TADPTGKLKSDEVCIILDHGQVQGRVLVYKHPGLHFGDIHVLNATY 929