BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006315
         (5998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...  1570   0.0  
emb|CBI40152.3| unnamed protein product [Vitis vinifera]             1564   0.0  
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...  1564   0.0  
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac...  1539   0.0  
ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E sub...  1535   0.0  

>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
            sativus]
          Length = 1959

 Score = 1570 bits (4066), Expect = 0.0
 Identities = 876/1796 (48%), Positives = 1164/1796 (64%), Gaps = 33/1796 (1%)
 Frame = +2

Query: 2    FRYGDKNCRPLLPAEVMTILRKIPADTRKKLLAKRCFPQEGYVLQYLPVPPNCLSVPDIS 181
            FRYGD   R LLP EV  +L+KIP +TRKKL  +  +PQ+GY+LQYLPVPPNCLSVP+IS
Sbjct: 165  FRYGDNFTRTLLPCEVKEMLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEIS 224

Query: 182  DGTNIMSRDHSISLLKRVLKQIEDIKNSRSGMPNFESHLVESNELQVAVAQYFQFRGTGK 361
            DG  +MS D ++S+LK++LKQ+E IK SRSG PNFESH VE+N+LQ+AV QY Q RGT K
Sbjct: 225  DGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVK 284

Query: 362  ATRDVDTRFGVTKESNTSSTKAWLEKMKTLFIRKSSGFSSRSVITGDPYIGINEIGLPFE 541
            A+R +D RFGV KE N  STKAWLEKM+TLFIRK SGFSSRSVITGD Y  +NEIG+PFE
Sbjct: 285  ASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFE 344

Query: 542  IAQKITFEERVSQHNLNYLQKLVDEKLCLTYRDGMSTYSLREGSKGHTFLRSGQVVHRRI 721
            +AQ+ITFEERVS HN+ YLQ+LVD+KLCLTYRDG S YSLREGS GHT+L+ GQ+VHRRI
Sbjct: 345  VAQRITFEERVSVHNIRYLQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRI 404

Query: 722  MDGDMVFINRPPTTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLA 901
            MDGD+VFINRPPTTHKHSLQAL VY+HDDH VKINPLICGPLSADFDGDCIHLFYPQS+A
Sbjct: 405  MDGDIVFINRPPTTHKHSLQALRVYLHDDHVVKINPLICGPLSADFDGDCIHLFYPQSIA 464

Query: 902  ARAEVLELFSVEKQLLSSHTGNFNLQLATDSLLSLKLMFKKYFFGRVAAQQLMMFVPTLL 1081
            A+AEVL LFSVEKQLLSSH+GN NLQLA DSLLSLK+MF+KYF G+ AAQQL MFV + L
Sbjct: 465  AKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYL 524

Query: 1082 NDPAVIKNHSSGPLWTVLQMLQAALPPSFACSGERYLTHKNELVKFDFNRDLVQSTFTDV 1261
              PA++   S    WT LQ+LQ  LP SF C G+ YL   +  +KFDF+RD + S   ++
Sbjct: 525  PPPALLGVRSGSLHWTALQILQTVLPASFDCHGDSYLIKNSNFLKFDFDRDAMPSLINEI 584

Query: 1262 VTSILFSEGPKVVVSFFNSLTPLLMEYLHSEGFSVCLEDFYIPKASIDSVQESVKNISPL 1441
            +TSI F +GP+ V+ FF+SL PLLME++ SEGFSV L+D+ +P A + ++Q++++ +SPL
Sbjct: 585  LTSIFFQKGPEEVLKFFDSLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPL 644

Query: 1442 LYHMRSSHSEPLQLEMSSYLRGVRLHILNTVLQSSAIGFLIDSRSESALSKVAQQIGFLG 1621
            LY +RS+ +E ++L++ ++LR V++   N +L+ S++G L DS+SESA++KV QQIGFLG
Sbjct: 645  LYQLRSTFNELVELQLENHLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLG 704

Query: 1622 MQLSDKGKFYSKTLVSDLALLFHRKYPSVD-DYPSEEFGLVGSCLFNGLDPYQEMVHXXX 1798
            +QLSDKG+FYSK+L+ D+A LFH +Y S   DYPS EFGLV  C F+GLDPY+EMVH   
Sbjct: 705  LQLSDKGRFYSKSLIEDVASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSIS 764

Query: 1799 XXXXXXXXXXGLTEPGTLFKNLMAILRDVVICYDGTVRNVSANSIIQFQYGT-SNEFTFN 1975
                      GLTEPGTLFKNLMAILRDVVICYDGTVRNV +NSIIQ +YG  +      
Sbjct: 765  TREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPY 824

Query: 1976 NEFGAGEPVGVLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNEVSDRRILL 2155
            + F  GEPVGVLAATAMS PAYKAVLD        W+MMKEILLC V+FKNE  DRR++L
Sbjct: 825  SLFPPGEPVGVLAATAMSTPAYKAVLDSTPSSNSSWDMMKEILLCKVSFKNEPIDRRVIL 884

Query: 2156 YLKDCDCGRTYCREKAACIIKNQLRKVSLKDAAVELLIEYKQQSLYEGLEIVSGLLGHIH 2335
            YL +C CGR YC E AA ++K+ L+KV+LKDAA++ +IEY +Q    GL    GL+GH+H
Sbjct: 885  YLNNCACGRKYCNENAAYVVKSHLKKVTLKDAAMDFMIEYNRQPTPSGLG--PGLVGHVH 942

Query: 2336 LNEALLRSSYISMNEILSKCEDMISSLQKQKKDGHLFKKVTLEVSDCCSFQ--HSSKTYP 2509
            LN  LL+   I M E+L +C++ +SS +K+KK   +   +   +S+ C+F   +  ++  
Sbjct: 943  LNRMLLKELNIDMTEVLRRCQETMSSFKKKKKK--IAHALRFSISEHCAFHQWNGEESID 1000

Query: 2510 VPCLTIWLKASYVDDLAKTSHDLTEKICPPILETVIKGDPRVSTVNIIWINPDTPTWIRS 2689
            +PCL  W +   V  L +T+H L + + P + ET+IKGDPR+ + ++IWI+PD+ +W ++
Sbjct: 1001 MPCLIFWHQTRDVH-LERTAHILADIVFPLLSETIIKGDPRIKSASVIWISPDSTSWQKN 1059

Query: 2690 TNKSQKGELALDVVLEKRSVRQTGDSWRVVMDSCLSVLHLIDTNRSIPYAIKQVQELLGI 2869
             ++ Q GELALDV LEK +V+Q GD+WR V+D CL VLHLIDT RS+PYAIKQVQELLGI
Sbjct: 1060 PSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPVLHLIDTRRSVPYAIKQVQELLGI 1119

Query: 2870 SCAFEQAVQRLSTSVTMVTKGVLKDHLVLLANSMTCAGNLIGFNSGGIKALAQSLNVQVP 3049
            SCAF+Q +QRLS SV+MV+KGVL DHL+LLANSMTC GN+IGFNSGG KAL+++LN+QVP
Sbjct: 1120 SCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNSGGYKALSRALNIQVP 1179

Query: 3050 FMEATLSAPRKCFERAAEKCHVDSLSSVVASCSWGKQVAVGTGSAFDILFDTRKVELNQP 3229
            F EATL  PRKCFE+AAEKCH DSLSS+VASCSWGK VAVGTGS FDIL+D +++   Q 
Sbjct: 1180 FTEATLFTPRKCFEKAAEKCHKDSLSSIVASCSWGKHVAVGTGSRFDILWDQKELGCKQD 1239

Query: 3230 DGVDMYDFLQLVRGGSSGEETSTACIGTEIENLDLDDEAMDSELSPVREP----GQPTFE 3397
            D VD+Y+FL +VR G S E TS AC+G EIE++ ++DE  +  LSP  EP     +P FE
Sbjct: 1240 DVVDVYNFLHMVRSGKSEEPTS-ACLGEEIEDIMVEDEYGELTLSP--EPFSTSEKPVFE 1296

Query: 3398 DRPELSDRLENPVLEVSNSGEHQWKSDPPQTAELSGSWDWANKGQSNGVTTVASD-SAWS 3574
            D  E    L+N        GE +W+  P   A  +G   W  +   NG  T +SD + WS
Sbjct: 1297 DSAEFEHCLDN------YPGESKWEKAPSLGAVSTGGGQW--ESNENGKATNSSDGNDWS 1348

Query: 3575 GWGNGVGNKVXXXXXXXXXXXXXXXWTVRETERNWKQSG---SSTWGRKVESECDSPRAS 3745
            GWG      V                TV   + N   S    +S+WG K  +  +    S
Sbjct: 1349 GWGRKAEPDV----------------TVTNAQENTSNSAWDTTSSWGNKATNSSNDNDWS 1392

Query: 3746 ERSGNWEEATDKAQNIGTSGAASDSARSHWGSDSVDTESLQQKTL--KCGEWC-----KK 3904
              S    E         T  +    + S WG+ + D +S +++T   K  +W      K 
Sbjct: 1393 NCSTKEVERDSFTSMEKTPKSGGWDSASTWGTKTKD-DSFKRETAPKKSSQWSGLQKDKA 1451

Query: 3905 EPQNIGKQSGSSSAWGKKFDAERDSPLMDKSIGGWDQKI-GKSQNGEAHRAALDSSWSGW 4081
            E Q+   +    ++    ++ +  S    K+   W  ++  K+++ +     + S  +GW
Sbjct: 1452 ETQDAFHKKAEMASKSGGWEDKAWSRGTSKTEDNWSSQVKDKAESFQVQVQEVSSKTNGW 1511

Query: 4082 GSVQVTKEDSLLNKVVENGTEETLSIGKQSGP-SPSRGQMFDSLRSSPLGGWDQKINKVQ 4258
            GS     ++S        G +     G   G  S  R ++ D         WD+K    Q
Sbjct: 1512 GSTGGWTKNS--------GGDHQSEAGWNDGQASMDREKVSDR--------WDRKAT--Q 1553

Query: 4259 SAEAHKSAPNSEWSSWGSRQVL-KEDSLPNKLQQISPNHNGCSIEEHQNIGKPSGSSSAW 4435
              E+H++      SSWGS  V   +DS P+K    + +H+   +    +  K   +S  +
Sbjct: 1554 KLESHQT------SSWGSPTVGDSKDSFPSK----AVDHSDSVVNHSWDRQKSPEASQGF 1603

Query: 4436 ELDCDSGRNSMLGGWDQKIDKGQNVETQRSAAN-SGWSGWGQDSGNQSVSSSGWG----- 4597
              D           W Q+  K ++V     A N S  SGWG    +   S  G+      
Sbjct: 1604 GNDA----------WGQQ--KSRDVIKPSLANNESNLSGWGSQIESNEGSDHGFDQVTNE 1651

Query: 4598 -KNIDTDGVSPLAAKSSGGWGQKESVKLVGSSWGKKVSSNDAWIKMHENHDLARPMAPNH 4774
             K+ DT G      K+   W +++S++    SWG +  S  +W          +P     
Sbjct: 1652 QKSSDTRGWDS-QEKTDKPWDKQKSLE-ASQSWGSQNDSLGSW---------GQPQRA-- 1698

Query: 4775 SEFSNREIDTVHIEDTLPNRIEEGSLKSDVETIRFENDEEKNKSDCAPSWGSSRDAQSQW 4954
            SE  +RE           +  +   LK    ++ +E   ++   + +  WGS +++  Q 
Sbjct: 1699 SEECSRESQD-------DSSTQFSQLKPPETSLGWE---QQKSPEVSHGWGSHKESSEQT 1748

Query: 4955 GKRKWSKGDAIKNSQGWGSPSSGEWRNKRNHPTKA----FDNFKANGPLTLTKQRLDLFT 5122
                W K +  + S+GWG  ++GEW+N++N P K+     D+       T + QRLD+FT
Sbjct: 1749 SSHGWDKKN--QGSKGWGG-NAGEWKNRKNRPPKSPGMSNDDANLRALYTASGQRLDMFT 1805

Query: 5123 VEEQDVLSDIEKMMQNIRRIMHQTGYNDGDPLSADDQSYIVDYVLNYHPDKALKIG 5290
             EEQD+L+DIE +MQ+IR++MHQ+GYNDGDPLSA+DQS+++  V N+HPDKA K+G
Sbjct: 1806 SEEQDILADIEPIMQSIRKVMHQSGYNDGDPLSAEDQSFVLQSVFNFHPDKAAKMG 1861



 Score =  101 bits (252), Expect = 2e-18
 Identities = 46/71 (64%), Positives = 59/71 (83%)
 Frame = +1

Query: 5362 GIQYIMVSKHANFQDTRCFYVVSTDDHKQDFSYRKSLENFAREKYPDKAEGFLAKYFRRP 5541
            GI + MVS+H++FQ++RCFYVV+TD HK+DFSYRK L+NF + KYPD AE F+AKYFR+ 
Sbjct: 1863 GIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYPDLAEMFVAKYFRK- 1921

Query: 5542 QPRPGWNRDRS 5574
             PRP  NRDR+
Sbjct: 1922 -PRPNRNRDRN 1931


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score = 1564 bits (4050), Expect = 0.0
 Identities = 873/1644 (53%), Positives = 1082/1644 (65%), Gaps = 20/1644 (1%)
 Frame = +2

Query: 2    FRYGDKNCRPLLPAEVMTILRKIPADTRKKLLAKRCFPQEGYVLQYLPVPPNCLSVPDIS 181
            +RYG    R LLP+EVM ILR+IP DTRKKL+ K  FPQ+GY+LQYLPVPPNCLSVPDIS
Sbjct: 225  YRYGHNLSRILLPSEVMEILRRIPEDTRKKLVRKGYFPQDGYILQYLPVPPNCLSVPDIS 284

Query: 182  DGTNIMSRDHSISLLKRVLKQIEDIKNSRSGMPNFESHLVESNELQVAVAQYFQFRGTGK 361
            DG +IMS D S+S+LK+VLKQIE IK SRSG PNFESH +E+N LQ ++ QY + RGT K
Sbjct: 285  DGVSIMSSDLSVSMLKKVLKQIEVIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAK 344

Query: 362  ATRDVDTRFGVTKESNTSSTKAWLEKMKTLFIRKSSGFSSRSVITGDPYIGINEIGLPFE 541
             +R +DTRFG +KE N SSTKAWLEKM+TLFIRK SGFSSRSVITGD Y  +NEIGLPFE
Sbjct: 345  TSRSLDTRFGSSKEPNESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGLPFE 404

Query: 542  IAQKITFEERVSQHNLNYLQKLVDEKLCLTYRDGMSTYSLREGSKGHTFLRSGQVVHRRI 721
            IAQ+ITFEERV+ HN+ +LQ LVDEKLCLTYRDG+STYSLREGSKGHTFLR GQVVHRRI
Sbjct: 405  IAQRITFEERVNVHNMKHLQNLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRI 464

Query: 722  MDGDMVFINRPPTTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLA 901
            MDGD+VFINRPPTTHKHSLQALSVY+HDDHTVKINPLICGPLSADFDGDC+HLFYPQSL 
Sbjct: 465  MDGDIVFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLG 524

Query: 902  ARAEVLELFSVEKQLLSSHTGNFNLQLATDSLLSLKLMFKKYFFGRVAAQQLMMFVPTLL 1081
            A+AEVLELFSVEKQLLSSH+GN NLQLATDSLLSLK++F++YF  + AAQQL+MFV   L
Sbjct: 525  AKAEVLELFSVEKQLLSSHSGNLNLQLATDSLLSLKVLFERYFLNKAAAQQLVMFVSMSL 584

Query: 1082 NDPAVIKNHSSGPLWTVLQMLQAALPPSFACSGERYLTHKNELVKFDFNRDLVQSTFTDV 1261
              PA++K+  SGP WT LQ+LQ ALP  F C GER+   K+ ++K D+NRD++QS   ++
Sbjct: 585  PRPALLKSPCSGPCWTALQILQTALPSYFDCIGERHWISKSAILKVDYNRDVLQSLVNEI 644

Query: 1262 VTSILFSEGPKVVVSFFNSLTPLLMEYLHSEGFSVCLEDFYIPKASIDSVQESVKNISPL 1441
            VTSI   +GP  V+ FF+SL PLLME L SEGFSV LEDF IP     ++Q++V++IS L
Sbjct: 645  VTSIFSEKGPNEVLKFFDSLQPLLMENLFSEGFSVSLEDFSIPSEVTQNIQKNVEDISSL 704

Query: 1442 LYHMRSSHSEPLQLEMSSYLRGVRLHILNTVLQSSAIGFLIDSRSESALSKVAQQIGFLG 1621
            LY++RS ++E LQL+  ++LR  ++ + N +L SSA+G LIDS+S+SA++KV QQIGFLG
Sbjct: 705  LYNLRSMYNELLQLQAENHLRLTKVPVANFILNSSALGNLIDSKSDSAINKVVQQIGFLG 764

Query: 1622 MQLSDKGKFYSKTLVSDLALLFHRKYP-SVDDYPSEEFGLVGSCLFNGLDPYQEMVHXXX 1798
             QLS+KGKFYS+TLV  +A LF  KYP    DYPS EFGL+ SC F+GLDPY+EMVH   
Sbjct: 765  QQLSEKGKFYSRTLVEGMAYLFKSKYPFHGADYPSGEFGLIRSCFFHGLDPYEEMVHSIS 824

Query: 1799 XXXXXXXXXXGLTEPGTLFKNLMAILRDVVICYDGTVRNVSANSIIQFQYGTSNEFTFNN 1978
                      GL+EPGTLFKNLMAILRDVVICYDGTVRNV +NSIIQF+YG        +
Sbjct: 825  TREIIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKARTKPQH 884

Query: 1979 EFGAGEPVGVLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNEVSDRRILLY 2158
             F AGEPVGVLAATAMSNPAYKAVLD        WE+MKEILLC VNFKN++ DRR++LY
Sbjct: 885  FFPAGEPVGVLAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCQVNFKNDLIDRRVILY 944

Query: 2159 LKDCDCGRTYCREKAACIIKNQLRKVSLKDAAVELLIEY-KQQSLYEGLEIVSGLLGHIH 2335
            L DCDCGR YCRE AA ++KNQL+K SLKD AVE +IEY KQ ++    E  +GL+GHIH
Sbjct: 945  LNDCDCGRKYCRENAAYLVKNQLKKASLKDTAVEFMIEYVKQHAVSGSSEPGTGLVGHIH 1004

Query: 2336 LNEALLRSSYISMNEILSKCEDMISSLQKQKKDGHLFKKVTLEVSDCCSFQHS--SKTYP 2509
            LN+ LL+   +SM E+  KCE+ I+S +K+K  G  FKK+ L   +CC+FQHS  SK   
Sbjct: 1005 LNKLLLQDLNVSMQEVCQKCEETINSFRKKKNVGPFFKKIILSFRECCTFQHSCQSKGSD 1064

Query: 2510 VPCLTIWLKASYVDDLAKTSHDLTEKICPPILETVIKGDPRVSTVNIIWINPDTPTWIRS 2689
            +PCL  + + +  D+L +  H L  KICP +L+T+IKGD RV TVNIIWI+PDT TWIR+
Sbjct: 1065 MPCLLFFWQGNRDDNLEQILHILAHKICPVLLQTIIKGDSRVCTVNIIWISPDTTTWIRN 1124

Query: 2690 TNKSQKGELALDVVLEKRSVRQTGDSWRVVMDSCLSVLHLIDTNRSIPYAIKQVQELLGI 2869
              KS+KGELALD+VLEK +V+Q GD+WR+V+D+CL VLHLIDT RSIPYAIKQVQELLGI
Sbjct: 1125 PCKSRKGELALDIVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYAIKQVQELLGI 1184

Query: 2870 SCAFEQAVQRLSTSVTMVTKGVLKDHLVLLANSMTCAGNLIGFNSGGIKALAQSLNVQVP 3049
            SCAF+QAVQRLS SVTMV KGVLK+HL+LLANSMTCAGNLIGFNSGG KAL+++LN+QVP
Sbjct: 1185 SCAFDQAVQRLSKSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRALNLQVP 1244

Query: 3050 FMEATLSAPRKCFERAAEKCHVDSLSSVVASCSWGKQVAVGTGSAFDILFDTRKVELNQP 3229
            F EATL  PRKCFE+A+EKCH DSLSS+VASCSWGK V VGTGS FD+L+DT+++   Q 
Sbjct: 1245 FTEATLFTPRKCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLWDTKEIGPAQD 1304

Query: 3230 DGVDMYDFLQLVRGGSSGEETSTACIGTEIENLDLDDEAMDSELSPVREPGQPTFEDRPE 3409
             G+D+Y FL LVR GS G+E  TAC+G E+E+L L+DE ++  +S             PE
Sbjct: 1305 GGIDIYSFLHLVRSGSYGKEPDTACLGAEVEDLILEDENLELGMS-------------PE 1351

Query: 3410 LSDRLENPVLEVSNSGEHQWKSDPPQTAELSGSWDWANKGQSNGVTTVASDSAWSGWGNG 3589
             S   E PV E S   ++ W++  P         DWA         +    SAWS WG  
Sbjct: 1352 HSSNFEKPVFEDSAEFQNTWENHVP-----GSGGDWAVNQNKETTASTLKPSAWSSWGT- 1405

Query: 3590 VGNKVXXXXXXXXXXXXXXXWTVRETERNWKQSGSSTWGRKVESECDSPRASERSGNWEE 3769
              +KV               ++ RE + + + +G   W  K              G W  
Sbjct: 1406 --DKV----------TMKDTFSTREPDESSRSAG---WDDK--------------GTW-- 1434

Query: 3770 ATDKAQNIGTSGAASDSARSHWGSDSVDTESLQQKTLKCGEWCKKEPQNIGKQSGSSSAW 3949
             TDKAQN        DS RS  G D                    E    G+   +SSAW
Sbjct: 1435 GTDKAQNTAFRRTHEDSPRSS-GRD--------------------ETFRDGRPQFASSAW 1473

Query: 3950 GKKFDAERD---------SPLMDK--SIGGWDQKIGKSQNGEAHRAALDSSWSGWGSVQV 4096
            GKK D E D          P MDK      WD K+ + +  ++    + S+   W     
Sbjct: 1474 GKKID-EADKTGWNKNDGKPQMDKLRESYDWDCKVAQEKTTQSTYGGISSTTGDW----- 1527

Query: 4097 TKEDSLLNKVVENGTEETLSIGKQSG-PSPSRGQMFDSLRSSPLGGWDQKINKVQS-AEA 4270
             K++ L  +VV++           +  P     Q   S+      G D    K+QS +E 
Sbjct: 1528 -KKNELQMEVVQHDESPVNEHSWDANLPEDPLAQATTSVGWDSSTGKDWTKRKLQSPSEQ 1586

Query: 4271 HKSAPNSEWSSWGSRQVLKEDSLPNKLQQISPNHNGCSIEEHQNIGKPSGSSSAWELDCD 4450
             +      WSS  S  V+KE S      Q +  H           G  S  +  W    D
Sbjct: 1587 QRDPAIKSWSS--SHNVMKEQS-----NQPASTH-----------GWDSPGAKGWN---D 1625

Query: 4451 SGRNSMLGGWDQKIDKGQNVETQRSAANSGWSGWGQDSGNQSVSSSGWGKNIDTDGVSPL 4630
                S    W+Q   +G  V+  +S ++ GW     +  NQ  SS GWG     +  +  
Sbjct: 1626 VEEQSQ---WNQ---RGSAVKNDQSESSHGWG--PSNEQNQLPSSQGWG---SPNAGAGH 1674

Query: 4631 AAKSSGGWGQ---KESVKLVGSSWGKKVSSNDAWIKMHENHDLARPMAPNHSEFSNREID 4801
             +++   WGQ   K+S       WG   S+N  W   ++ +   +P  P + ++S   I 
Sbjct: 1675 ESETQSQWGQPSGKKSRPEGSRGWG---SNNTEW--KNKKNRPNKPQGPLNDDYSAGGIF 1729

Query: 4802 TVHIEDTLPNRIEEGSLKSDVETI 4873
            T   +       EE  +  DVE I
Sbjct: 1730 TATRQRVDIFTSEEQDILLDVEPI 1753



 Score =  162 bits (410), Expect(2) = 2e-62
 Identities = 136/465 (29%), Positives = 204/465 (43%), Gaps = 44/465 (9%)
 Frame = +2

Query: 4028 SQNGEAHRAALD-SSWSGWGSVQVTKEDSLLNKVVENGTEETLSIGKQSGPSPSRGQMFD 4204
            +QN E   + L  S+WS WG+ +VT +D+   +  +                        
Sbjct: 1385 NQNKETTASTLKPSAWSSWGTDKVTMKDTFSTREPDE----------------------- 1421

Query: 4205 SLRSSPLGGWDQKINKVQSAEAHKSAPNSEWSSWGSRQVLKEDSLPNKLQQISPNHNGCS 4384
               SS   GWD K                   +WG+ +   +++   +  + SP  +G  
Sbjct: 1422 ---SSRSAGWDDK------------------GTWGTDKA--QNTAFRRTHEDSPRSSGR- 1457

Query: 4385 IEEHQNIGKPSGSSSAWELDCD----SGRNSMLG-----------GWDQKIDKGQNVETQ 4519
             +E    G+P  +SSAW    D    +G N   G            WD K+ + +  ++ 
Sbjct: 1458 -DETFRDGRPQFASSAWGKKIDEADKTGWNKNDGKPQMDKLRESYDWDCKVAQEKTTQST 1516

Query: 4520 RSAANSGWSGWGQDS--------GNQSVSSSGWGKNIDTDGVSPLA-AKSSGGWGQKESV 4672
                +S    W ++             V+   W  N+  D   PLA A +S GW      
Sbjct: 1517 YGGISSTTGDWKKNELQMEVVQHDESPVNEHSWDANLPED---PLAQATTSVGWDSSTGK 1573

Query: 4673 -----KLVGSSWGKKVSSNDAWIKMHE-NHDLARPMAPNHSEFSNREIDTVHIEDTLPNR 4834
                 KL   S  ++  +  +W   H    + +   A  H   S        +E+     
Sbjct: 1574 DWTKRKLQSPSEQQRDPAIKSWSSSHNVMKEQSNQPASTHGWDSPGAKGWNDVEEQSQWN 1633

Query: 4835 IEEGSLKSDVETIR--FENDEEKNKSDCAPSWGSSR-------DAQSQWGKRKWSKGDAI 4987
                ++K+D       +    E+N+   +  WGS         + QSQWG+    K    
Sbjct: 1634 QRGSAVKNDQSESSHGWGPSNEQNQLPSSQGWGSPNAGAGHESETQSQWGQPSGKKSRP- 1692

Query: 4988 KNSQGWGSPSSGEWRNKRNHPTKAF----DNFKANGPLTLTKQRLDLFTVEEQDVLSDIE 5155
            + S+GWGS ++ EW+NK+N P K      D++ A G  T T+QR+D+FT EEQD+L D+E
Sbjct: 1693 EGSRGWGSNNT-EWKNKKNRPNKPQGPLNDDYSAGGIFTATRQRVDIFTSEEQDILLDVE 1751

Query: 5156 KMMQNIRRIMHQTGYNDGDPLSADDQSYIVDYVLNYHPDKALKIG 5290
             +MQ+IRRIMHQ GYNDGDPLSADDQSYI+D V N HPDKA+K+G
Sbjct: 1752 PIMQSIRRIMHQAGYNDGDPLSADDQSYILDKVFNNHPDKAVKMG 1796



 Score =  107 bits (267), Expect(2) = 2e-62
 Identities = 49/71 (69%), Positives = 59/71 (83%)
 Frame = +1

Query: 5362 GIQYIMVSKHANFQDTRCFYVVSTDDHKQDFSYRKSLENFAREKYPDKAEGFLAKYFRRP 5541
            GI Y+MVS+H++F ++RCFYVVSTD HK+DFSYRK LENF +EKYPD AE F+ KYFRR 
Sbjct: 1798 GIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETFIGKYFRR- 1856

Query: 5542 QPRPGWNRDRS 5574
             PR G NR+RS
Sbjct: 1857 -PRAGGNRERS 1866


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score = 1564 bits (4050), Expect = 0.0
 Identities = 873/1644 (53%), Positives = 1082/1644 (65%), Gaps = 20/1644 (1%)
 Frame = +2

Query: 2    FRYGDKNCRPLLPAEVMTILRKIPADTRKKLLAKRCFPQEGYVLQYLPVPPNCLSVPDIS 181
            +RYG    R LLP+EVM ILR+IP DTRKKL+ K  FPQ+GY+LQYLPVPPNCLSVPDIS
Sbjct: 165  YRYGHNLSRILLPSEVMEILRRIPEDTRKKLVRKGYFPQDGYILQYLPVPPNCLSVPDIS 224

Query: 182  DGTNIMSRDHSISLLKRVLKQIEDIKNSRSGMPNFESHLVESNELQVAVAQYFQFRGTGK 361
            DG +IMS D S+S+LK+VLKQIE IK SRSG PNFESH +E+N LQ ++ QY + RGT K
Sbjct: 225  DGVSIMSSDLSVSMLKKVLKQIEVIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAK 284

Query: 362  ATRDVDTRFGVTKESNTSSTKAWLEKMKTLFIRKSSGFSSRSVITGDPYIGINEIGLPFE 541
             +R +DTRFG +KE N SSTKAWLEKM+TLFIRK SGFSSRSVITGD Y  +NEIGLPFE
Sbjct: 285  TSRSLDTRFGSSKEPNESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGLPFE 344

Query: 542  IAQKITFEERVSQHNLNYLQKLVDEKLCLTYRDGMSTYSLREGSKGHTFLRSGQVVHRRI 721
            IAQ+ITFEERV+ HN+ +LQ LVDEKLCLTYRDG+STYSLREGSKGHTFLR GQVVHRRI
Sbjct: 345  IAQRITFEERVNVHNMKHLQNLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRI 404

Query: 722  MDGDMVFINRPPTTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLA 901
            MDGD+VFINRPPTTHKHSLQALSVY+HDDHTVKINPLICGPLSADFDGDC+HLFYPQSL 
Sbjct: 405  MDGDIVFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLG 464

Query: 902  ARAEVLELFSVEKQLLSSHTGNFNLQLATDSLLSLKLMFKKYFFGRVAAQQLMMFVPTLL 1081
            A+AEVLELFSVEKQLLSSH+GN NLQLATDSLLSLK++F++YF  + AAQQL+MFV   L
Sbjct: 465  AKAEVLELFSVEKQLLSSHSGNLNLQLATDSLLSLKVLFERYFLNKAAAQQLVMFVSMSL 524

Query: 1082 NDPAVIKNHSSGPLWTVLQMLQAALPPSFACSGERYLTHKNELVKFDFNRDLVQSTFTDV 1261
              PA++K+  SGP WT LQ+LQ ALP  F C GER+   K+ ++K D+NRD++QS   ++
Sbjct: 525  PRPALLKSPCSGPCWTALQILQTALPSYFDCIGERHWISKSAILKVDYNRDVLQSLVNEI 584

Query: 1262 VTSILFSEGPKVVVSFFNSLTPLLMEYLHSEGFSVCLEDFYIPKASIDSVQESVKNISPL 1441
            VTSI   +GP  V+ FF+SL PLLME L SEGFSV LEDF IP     ++Q++V++IS L
Sbjct: 585  VTSIFSEKGPNEVLKFFDSLQPLLMENLFSEGFSVSLEDFSIPSEVTQNIQKNVEDISSL 644

Query: 1442 LYHMRSSHSEPLQLEMSSYLRGVRLHILNTVLQSSAIGFLIDSRSESALSKVAQQIGFLG 1621
            LY++RS ++E LQL+  ++LR  ++ + N +L SSA+G LIDS+S+SA++KV QQIGFLG
Sbjct: 645  LYNLRSMYNELLQLQAENHLRLTKVPVANFILNSSALGNLIDSKSDSAINKVVQQIGFLG 704

Query: 1622 MQLSDKGKFYSKTLVSDLALLFHRKYP-SVDDYPSEEFGLVGSCLFNGLDPYQEMVHXXX 1798
             QLS+KGKFYS+TLV  +A LF  KYP    DYPS EFGL+ SC F+GLDPY+EMVH   
Sbjct: 705  QQLSEKGKFYSRTLVEGMAYLFKSKYPFHGADYPSGEFGLIRSCFFHGLDPYEEMVHSIS 764

Query: 1799 XXXXXXXXXXGLTEPGTLFKNLMAILRDVVICYDGTVRNVSANSIIQFQYGTSNEFTFNN 1978
                      GL+EPGTLFKNLMAILRDVVICYDGTVRNV +NSIIQF+YG        +
Sbjct: 765  TREIIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKARTKPQH 824

Query: 1979 EFGAGEPVGVLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNEVSDRRILLY 2158
             F AGEPVGVLAATAMSNPAYKAVLD        WE+MKEILLC VNFKN++ DRR++LY
Sbjct: 825  FFPAGEPVGVLAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCQVNFKNDLIDRRVILY 884

Query: 2159 LKDCDCGRTYCREKAACIIKNQLRKVSLKDAAVELLIEY-KQQSLYEGLEIVSGLLGHIH 2335
            L DCDCGR YCRE AA ++KNQL+K SLKD AVE +IEY KQ ++    E  +GL+GHIH
Sbjct: 885  LNDCDCGRKYCRENAAYLVKNQLKKASLKDTAVEFMIEYVKQHAVSGSSEPGTGLVGHIH 944

Query: 2336 LNEALLRSSYISMNEILSKCEDMISSLQKQKKDGHLFKKVTLEVSDCCSFQHS--SKTYP 2509
            LN+ LL+   +SM E+  KCE+ I+S +K+K  G  FKK+ L   +CC+FQHS  SK   
Sbjct: 945  LNKLLLQDLNVSMQEVCQKCEETINSFRKKKNVGPFFKKIILSFRECCTFQHSCQSKGSD 1004

Query: 2510 VPCLTIWLKASYVDDLAKTSHDLTEKICPPILETVIKGDPRVSTVNIIWINPDTPTWIRS 2689
            +PCL  + + +  D+L +  H L  KICP +L+T+IKGD RV TVNIIWI+PDT TWIR+
Sbjct: 1005 MPCLLFFWQGNRDDNLEQILHILAHKICPVLLQTIIKGDSRVCTVNIIWISPDTTTWIRN 1064

Query: 2690 TNKSQKGELALDVVLEKRSVRQTGDSWRVVMDSCLSVLHLIDTNRSIPYAIKQVQELLGI 2869
              KS+KGELALD+VLEK +V+Q GD+WR+V+D+CL VLHLIDT RSIPYAIKQVQELLGI
Sbjct: 1065 PCKSRKGELALDIVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYAIKQVQELLGI 1124

Query: 2870 SCAFEQAVQRLSTSVTMVTKGVLKDHLVLLANSMTCAGNLIGFNSGGIKALAQSLNVQVP 3049
            SCAF+QAVQRLS SVTMV KGVLK+HL+LLANSMTCAGNLIGFNSGG KAL+++LN+QVP
Sbjct: 1125 SCAFDQAVQRLSKSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRALNLQVP 1184

Query: 3050 FMEATLSAPRKCFERAAEKCHVDSLSSVVASCSWGKQVAVGTGSAFDILFDTRKVELNQP 3229
            F EATL  PRKCFE+A+EKCH DSLSS+VASCSWGK V VGTGS FD+L+DT+++   Q 
Sbjct: 1185 FTEATLFTPRKCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLWDTKEIGPAQD 1244

Query: 3230 DGVDMYDFLQLVRGGSSGEETSTACIGTEIENLDLDDEAMDSELSPVREPGQPTFEDRPE 3409
             G+D+Y FL LVR GS G+E  TAC+G E+E+L L+DE ++  +S             PE
Sbjct: 1245 GGIDIYSFLHLVRSGSYGKEPDTACLGAEVEDLILEDENLELGMS-------------PE 1291

Query: 3410 LSDRLENPVLEVSNSGEHQWKSDPPQTAELSGSWDWANKGQSNGVTTVASDSAWSGWGNG 3589
             S   E PV E S   ++ W++  P         DWA         +    SAWS WG  
Sbjct: 1292 HSSNFEKPVFEDSAEFQNTWENHVP-----GSGGDWAVNQNKETTASTLKPSAWSSWGT- 1345

Query: 3590 VGNKVXXXXXXXXXXXXXXXWTVRETERNWKQSGSSTWGRKVESECDSPRASERSGNWEE 3769
              +KV               ++ RE + + + +G   W  K              G W  
Sbjct: 1346 --DKV----------TMKDTFSTREPDESSRSAG---WDDK--------------GTW-- 1374

Query: 3770 ATDKAQNIGTSGAASDSARSHWGSDSVDTESLQQKTLKCGEWCKKEPQNIGKQSGSSSAW 3949
             TDKAQN        DS RS  G D                    E    G+   +SSAW
Sbjct: 1375 GTDKAQNTAFRRTHEDSPRSS-GRD--------------------ETFRDGRPQFASSAW 1413

Query: 3950 GKKFDAERD---------SPLMDK--SIGGWDQKIGKSQNGEAHRAALDSSWSGWGSVQV 4096
            GKK D E D          P MDK      WD K+ + +  ++    + S+   W     
Sbjct: 1414 GKKID-EADKTGWNKNDGKPQMDKLRESYDWDCKVAQEKTTQSTYGGISSTTGDW----- 1467

Query: 4097 TKEDSLLNKVVENGTEETLSIGKQSG-PSPSRGQMFDSLRSSPLGGWDQKINKVQS-AEA 4270
             K++ L  +VV++           +  P     Q   S+      G D    K+QS +E 
Sbjct: 1468 -KKNELQMEVVQHDESPVNEHSWDANLPEDPLAQATTSVGWDSSTGKDWTKRKLQSPSEQ 1526

Query: 4271 HKSAPNSEWSSWGSRQVLKEDSLPNKLQQISPNHNGCSIEEHQNIGKPSGSSSAWELDCD 4450
             +      WSS  S  V+KE S      Q +  H           G  S  +  W    D
Sbjct: 1527 QRDPAIKSWSS--SHNVMKEQS-----NQPASTH-----------GWDSPGAKGWN---D 1565

Query: 4451 SGRNSMLGGWDQKIDKGQNVETQRSAANSGWSGWGQDSGNQSVSSSGWGKNIDTDGVSPL 4630
                S    W+Q   +G  V+  +S ++ GW     +  NQ  SS GWG     +  +  
Sbjct: 1566 VEEQSQ---WNQ---RGSAVKNDQSESSHGWG--PSNEQNQLPSSQGWG---SPNAGAGH 1614

Query: 4631 AAKSSGGWGQ---KESVKLVGSSWGKKVSSNDAWIKMHENHDLARPMAPNHSEFSNREID 4801
             +++   WGQ   K+S       WG   S+N  W   ++ +   +P  P + ++S   I 
Sbjct: 1615 ESETQSQWGQPSGKKSRPEGSRGWG---SNNTEW--KNKKNRPNKPQGPLNDDYSAGGIF 1669

Query: 4802 TVHIEDTLPNRIEEGSLKSDVETI 4873
            T   +       EE  +  DVE I
Sbjct: 1670 TATRQRVDIFTSEEQDILLDVEPI 1693



 Score =  162 bits (410), Expect(2) = 2e-62
 Identities = 136/465 (29%), Positives = 204/465 (43%), Gaps = 44/465 (9%)
 Frame = +2

Query: 4028 SQNGEAHRAALD-SSWSGWGSVQVTKEDSLLNKVVENGTEETLSIGKQSGPSPSRGQMFD 4204
            +QN E   + L  S+WS WG+ +VT +D+   +  +                        
Sbjct: 1325 NQNKETTASTLKPSAWSSWGTDKVTMKDTFSTREPDE----------------------- 1361

Query: 4205 SLRSSPLGGWDQKINKVQSAEAHKSAPNSEWSSWGSRQVLKEDSLPNKLQQISPNHNGCS 4384
               SS   GWD K                   +WG+ +   +++   +  + SP  +G  
Sbjct: 1362 ---SSRSAGWDDK------------------GTWGTDKA--QNTAFRRTHEDSPRSSGR- 1397

Query: 4385 IEEHQNIGKPSGSSSAWELDCD----SGRNSMLG-----------GWDQKIDKGQNVETQ 4519
             +E    G+P  +SSAW    D    +G N   G            WD K+ + +  ++ 
Sbjct: 1398 -DETFRDGRPQFASSAWGKKIDEADKTGWNKNDGKPQMDKLRESYDWDCKVAQEKTTQST 1456

Query: 4520 RSAANSGWSGWGQDS--------GNQSVSSSGWGKNIDTDGVSPLA-AKSSGGWGQKESV 4672
                +S    W ++             V+   W  N+  D   PLA A +S GW      
Sbjct: 1457 YGGISSTTGDWKKNELQMEVVQHDESPVNEHSWDANLPED---PLAQATTSVGWDSSTGK 1513

Query: 4673 -----KLVGSSWGKKVSSNDAWIKMHE-NHDLARPMAPNHSEFSNREIDTVHIEDTLPNR 4834
                 KL   S  ++  +  +W   H    + +   A  H   S        +E+     
Sbjct: 1514 DWTKRKLQSPSEQQRDPAIKSWSSSHNVMKEQSNQPASTHGWDSPGAKGWNDVEEQSQWN 1573

Query: 4835 IEEGSLKSDVETIR--FENDEEKNKSDCAPSWGSSR-------DAQSQWGKRKWSKGDAI 4987
                ++K+D       +    E+N+   +  WGS         + QSQWG+    K    
Sbjct: 1574 QRGSAVKNDQSESSHGWGPSNEQNQLPSSQGWGSPNAGAGHESETQSQWGQPSGKKSRP- 1632

Query: 4988 KNSQGWGSPSSGEWRNKRNHPTKAF----DNFKANGPLTLTKQRLDLFTVEEQDVLSDIE 5155
            + S+GWGS ++ EW+NK+N P K      D++ A G  T T+QR+D+FT EEQD+L D+E
Sbjct: 1633 EGSRGWGSNNT-EWKNKKNRPNKPQGPLNDDYSAGGIFTATRQRVDIFTSEEQDILLDVE 1691

Query: 5156 KMMQNIRRIMHQTGYNDGDPLSADDQSYIVDYVLNYHPDKALKIG 5290
             +MQ+IRRIMHQ GYNDGDPLSADDQSYI+D V N HPDKA+K+G
Sbjct: 1692 PIMQSIRRIMHQAGYNDGDPLSADDQSYILDKVFNNHPDKAVKMG 1736



 Score =  107 bits (267), Expect(2) = 2e-62
 Identities = 49/71 (69%), Positives = 59/71 (83%)
 Frame = +1

Query: 5362 GIQYIMVSKHANFQDTRCFYVVSTDDHKQDFSYRKSLENFAREKYPDKAEGFLAKYFRRP 5541
            GI Y+MVS+H++F ++RCFYVVSTD HK+DFSYRK LENF +EKYPD AE F+ KYFRR 
Sbjct: 1738 GIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETFIGKYFRR- 1796

Query: 5542 QPRPGWNRDRS 5574
             PR G NR+RS
Sbjct: 1797 -PRAGGNRERS 1806


>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
          Length = 1902

 Score = 1539 bits (3984), Expect = 0.0
 Identities = 883/1841 (47%), Positives = 1171/1841 (63%), Gaps = 122/1841 (6%)
 Frame = +2

Query: 134  QYLPVPPNCLSVPDISDGTNIMSRDHSISLLKRVLKQIEDIKNSRSGMPNFESHLVESNE 313
            +Y+PVPPNCLSVPDISDG ++MS D   ++LK+VL+QIE I++SRSG PNFESH VE+N+
Sbjct: 1    RYVPVPPNCLSVPDISDGVSVMSSDLCSAMLKKVLRQIEVIRSSRSGEPNFESHEVEAND 60

Query: 314  LQVAVAQYFQFRGTGKATRDVDTRFGVTKESNTSSTKAWLEKMKTLFIRKSSGFSSRSVI 493
            LQVAV+QY Q RGTGKA R  D R+GV+KE N SS KAW+EKM+TLFI K SGFSSRSVI
Sbjct: 61   LQVAVSQYLQVRGTGKAARAADNRYGVSKEGNNSS-KAWVEKMRTLFISKGSGFSSRSVI 119

Query: 494  TGDPYIGINEIGLPFEIAQKITFEERVSQHNLNYLQKLVDEKLCLTYRDGMSTYSLREGS 673
            TGD Y  +NE+G+P EIAQK+TFEERV+ HN+ YLQ LVD+ LCLT+RDG+STYSLREGS
Sbjct: 120  TGDAYRAVNEVGVPCEIAQKMTFEERVNVHNIQYLQGLVDKNLCLTFRDGLSTYSLREGS 179

Query: 674  KGHTFLRSGQVVHRRIMDGDMVFINRPPTTHKHSLQALSVYIHDDHTVKINPLICGPLSA 853
            KGHTFLR GQ+VHRRIMDGD+VFINRPPTTHKHSLQAL VYIHDDH VKINPL+CGPL+A
Sbjct: 180  KGHTFLRLGQMVHRRIMDGDIVFINRPPTTHKHSLQALRVYIHDDHVVKINPLMCGPLAA 239

Query: 854  DFDGDCIHLFYPQSLAARAEVLELFSVEKQLLSSHTGNFNLQLATDSLLSLKLMFKKYFF 1033
            DFDGDC+HLFYPQSL+ARAEVLELFSVEKQLLSSH+GN NLQL+TDSLLSLK MF+ YF 
Sbjct: 240  DFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSHSGNLNLQLSTDSLLSLKTMFEVYFL 299

Query: 1034 GRVAAQQLMMFVPTLLNDPAV----------IKNHSSGPLWTVLQMLQAALPPSFACSGE 1183
             R +A QL M+  +LL  PA+           K HSSGP WT  Q+LQ ALP  F C G+
Sbjct: 300  DRASANQLAMYASSLLPSPALWKACSSNAKKKKAHSSGPRWTAQQVLQTALPSHFECHGD 359

Query: 1184 RYLTHKNELVKFDFNRDLVQSTFTDVVTSILFSEGPKVVVSFFNSLTPLLMEYLHSEGFS 1363
            R L H +E++K DFNRD+V S  +DV+TS+ F++ PK  + FF+SL PLLME L SEGFS
Sbjct: 360  RLLIHDSEILKLDFNRDIVASVISDVLTSLFFNKSPKDALDFFDSLQPLLMENLFSEGFS 419

Query: 1364 VCLEDFYIPKASIDSVQESVKNISPLLYHMRSSHSEPLQLEMSSYLRGVRLHILNTVLQS 1543
            V L DF+ PK+ + ++Q +++++SPLL  +RSS +E +Q++  +++R  +  + N +L S
Sbjct: 420  VSLHDFFFPKSELQNIQRNIQDLSPLLLQLRSSFNELVQVQFENHIREFKSPVGNFILIS 479

Query: 1544 SAIGFLIDSRSESALSKVAQQIGFLGMQLSDKGKFYSKTLVSDLALLFHRKYPSVDDYPS 1723
            SA+G +IDSRS+SA+ K+ QQIGFLG+QLSD+ KFYS+ LV D+A LFH+KYP  D YPS
Sbjct: 480  SALGSMIDSRSDSAIDKIVQQIGFLGLQLSDRRKFYSRGLVEDVASLFHQKYPFADVYPS 539

Query: 1724 EEFGLVGSCLFNGLDPYQEMVHXXXXXXXXXXXXXGLTEPGTLFKNLMAILRDVVICYDG 1903
            EEFG V  C F+GLDPY+E+VH             GL EPGTLFKNLMA+LRDVVICYDG
Sbjct: 540  EEFGFVSRCFFHGLDPYEEIVHSIATREVIVRSSKGLAEPGTLFKNLMAVLRDVVICYDG 599

Query: 1904 TVRNVSANSIIQFQYGTSNEFTFNNEFGAGEPVGVLAATAMSNPAYKAVLDXXXXXXXXW 2083
            TVRN+S+NS+IQF+YG        N F AG+PVGVLAATAMSNPAYKAVLD        W
Sbjct: 600  TVRNISSNSVIQFEYGVGG-MQSQNLFPAGDPVGVLAATAMSNPAYKAVLDSSPNSNSSW 658

Query: 2084 EMMKEILLCGVNFKNEVSDRRILLYLKDCDCGRTYCREKAACIIKNQLRKVSLKDAAVEL 2263
            +MMKEIL C  NF+N+++DRR++LYL DC CGR YC+E A+C++KN L+KVSL+DAA+EL
Sbjct: 659  DMMKEILFCRANFRNDINDRRVILYLNDCCCGRKYCQENASCLVKNHLKKVSLRDAAIEL 718

Query: 2264 LIEYKQQSLY-EGLEIVSGLLGHIHLNEALLRSSYISMNEILSKCEDMISSLQKQKKDGH 2440
             IEYK+  L  E  EI +GL+GHIHLN  LL++S I M++IL KCE+ ++ L+K+KK G+
Sbjct: 719  AIEYKRPKLEPESCEIDAGLVGHIHLNSGLLKASGIGMHDILQKCEEQVNLLRKKKKYGY 778

Query: 2441 LFKKVTLEVSDCCSFQHS-SKTYPVPCLTIWLKASYVDDLAKTSHDLTEKICPPILETVI 2617
             FK++ L VSDCC F HS SK   +PCL  + +     DL +T H + + ICP +L+T+I
Sbjct: 779  HFKRILLSVSDCCFFNHSDSKWTDMPCLKFFWQDMTDTDLERTKHIMADMICPVLLDTII 838

Query: 2618 KGDPRVSTVNIIWINPDTPTWIRSTNKSQKGELALDVVLEKRSVRQTGDSWRVVMDSCLS 2797
            KGDPR+STVNIIWINP T TW++S   S KGELA++V LEK +VR TGD+WR+V+D CL 
Sbjct: 839  KGDPRISTVNIIWINPGTTTWVQSPCSSTKGELAVEVALEKEAVRLTGDAWRIVLDCCLP 898

Query: 2798 VLHLIDTNRSIPYAIKQVQELLGISCAFEQAVQRLSTSVTMVTKGVLKDHLVLLANSMTC 2977
            V HLIDT RSIPYAIKQ+Q+L GISCAF+QAVQRLSTSVTMVTKGVLK+HL+LLA+SMTC
Sbjct: 899  VFHLIDTRRSIPYAIKQIQDLFGISCAFDQAVQRLSTSVTMVTKGVLKEHLLLLASSMTC 958

Query: 2978 AGNLIGFNSGGIKALAQSLNVQVPFMEATLSAPRKCFERAAEKCHVDSLSSVVASCSWGK 3157
            AGNL+GFN+ GIKAL ++LNVQVPF EATL  PRKCFERA+EKCHVD+L+S+V SCSWGK
Sbjct: 959  AGNLVGFNTSGIKALCRALNVQVPFTEATLYTPRKCFERASEKCHVDTLASIVGSCSWGK 1018

Query: 3158 QVAVGTGSAFDILFDTRKVEL-NQPDGVDMYDFLQLVRGGSSGEETSTACIGTEIENLDL 3334
            +V++GTG+ FD+L++T+++E+ ++P   D+Y+FL LV   ++ EE  +  +G +IE+ + 
Sbjct: 1019 RVSIGTGAKFDLLWETKEIEMADKP--TDVYNFLHLV-SSANEEEVDSGGLGEDIESFE- 1074

Query: 3335 DDEAMDSELSPVREPGQPTFEDRPEL--------SDRLENPVLEVSNSGEHQWKSDPPQT 3490
             D  M+  LSP +E  +  FE+  E+        +D         S +G   W ++   T
Sbjct: 1075 KDVYMEPALSPEQE-NKAVFEETLEIGVDSDITGADESSWDAFPSSGTG---WNANKIDT 1130

Query: 3491 AELSGSWDWANKGQSNGVTTVASDSAWSGWGNGVGNKVXXXXXXXXXXXXXXXWTVRETE 3670
               S    W++ G           S   GW +G G+K                W   +  
Sbjct: 1131 GSGSAEGGWSSWGSKKDQANPEDSSKTGGWSSG-GSK---QKPQPEDSSKSGGW---DAS 1183

Query: 3671 RNWKQSG----SSTWGRKVES------ECDSPRASERSGNW-----EEATDKAQNIGTSG 3805
            ++W  S     S  WG+ V++      E D    S   G W     ++   K +N  T+G
Sbjct: 1184 KSWGGSNQGDPSPVWGQPVKATNDISIENDHGSGSAEGGGWANSGMKKDLSKQENSSTAG 1243

Query: 3806 AASDSARSHWGSDSVDTES---LQQKTLKCGEW----CKKEPQNIGKQSGSSSAWGKKFD 3964
               D+++S  GS   D  S     +KT     W     KK+  +   + G  S WG K D
Sbjct: 1244 -GWDASKSWSGSKPKDPSSAWGAGKKTDDNNGWKKSDSKKDLASGSVEDGGCSGWGPKKD 1302

Query: 3965 AERDSPLMDKSIGGWDQKIGKSQNGEAHRAALDSSWSGWGSVQVTKEDSLLNKVV---EN 4135
              +      ++  G  +   K  +    + A ++   GW      ++   L       + 
Sbjct: 1303 LLQPEDSAGENGWGASKSKSKEPSSAWGKPAQETDNIGWKKNNPQRDSENLEGTSGWNDK 1362

Query: 4136 GTEETLSIGKQSGPSPSRGQMFDSLRSSPLG----GWDQKINKVQSAEAHKSAPNSEW-- 4297
              +E  S  KQS P+ S+   +DS  +   G    G ++   K     ++ S   S W  
Sbjct: 1363 LQKENKSFSKQSQPASSKD--WDSTGNITAGSTGFGVEKGNEKPWDVASNVSVKKSTWGQ 1420

Query: 4298 ---SSWGSRQVLKEDSLP-----NKLQQISPNHNGCSIEEH---QNIGKPSGSSSAWELD 4444
               +SW   +  ++D  P      K  + S +       +H   Q + +  G+ S+W   
Sbjct: 1421 TGGNSWKKNEQDEKDGDPQGLPWGKSHKSSDSWTSGQGNQHPVSQGVSEKQGTLSSWGQP 1480

Query: 4445 CDSG-RNSMLGG-------------WDQKIDKGQNVETQRSAANSGWSGWGQD------- 4561
             DS  +N+   G             WD K  K  NV  Q S A  G S W          
Sbjct: 1481 RDSSQKNNNENGVSSNFNRQGAGKSWDSK-KKESNV--QSSWAQQGDSTWKDSKEARSSV 1537

Query: 4562 SGNQSVSSSGW--GKNIDTDGVS------------PLAAKSSGGWG--QKESVKLVGSSW 4693
              N S +S GW  GK +  DGVS            P +   S G G   K++ +   SSW
Sbjct: 1538 KANNSTNSGGWSTGKAL-VDGVSSSWGSQKEDRPQPKSNDRSVGDGNFDKDAKEEGLSSW 1596

Query: 4694 -GKKV--SSNDAWIKMHENHDLARPMAPN-HSEFSNR--EIDTVHIEDTLPNRIEEGS-- 4849
              KKV   +  +W +  E+ + A+  A +  S+ SN+  +      EDT   +  E    
Sbjct: 1597 DAKKVERKTQSSWGQPSESKNSAQSSADHWGSDKSNQPGKSSGWGSEDTNAGKDSEKQDS 1656

Query: 4850 -LKSDVETIRFENDEEKNKSDCAPSWGSSRDAQSQWGK---RKWSKGDAIKNSQGWGSPS 5017
              KS+V T + E+ E+ + SD         D+QS WG+     W+K    +  +GWGS +
Sbjct: 1657 WGKSNVSTWKKESGEKLHGSD---------DSQSPWGQPGGSGWNKKQP-EGGRGWGSSN 1706

Query: 5018 SGEWRNKR----------NHPTKAFDNFKANGPLTLTKQRLDLFTVEEQDVLSDIEKMMQ 5167
            +GEW++++          N P +  ++      LT T++R+D F  EE+DVLS++E +MQ
Sbjct: 1707 TGEWKSRKNQNQNQNQNQNRPPRGPNDDSPRVALTATRKRMDEFPTEEKDVLSEVESLMQ 1766

Query: 5168 NIRRIMHQTGYNDGDPLSADDQSYIVDYVLNYHPDKALKIG 5290
            +IRRIMHQ+G  DG+PL  DDQ+Y++D +LNYHPDKA KIG
Sbjct: 1767 SIRRIMHQSGCVDGEPLLPDDQTYLIDNILNYHPDKAAKIG 1807



 Score = 82.8 bits (203), Expect = 1e-12
 Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
 Frame = +1

Query: 5362 GIQYIMVSKHANFQDTRCFYVVSTDDHKQDFSYRKSLENFAREKYPDKAEGFLAKYFRRP 5541
            G+ +I V KH+NFQ++RCFYVVSTD    DFSY K +E F + KYP  AE F +KYFRR 
Sbjct: 1809 GVDFITVKKHSNFQESRCFYVVSTDGKDTDFSYIKCIETFVKGKYPSVAESFTSKYFRRS 1868

Query: 5542 Q-PRP 5553
            Q P+P
Sbjct: 1869 QRPQP 1873


>ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max]
          Length = 2098

 Score = 1535 bits (3975), Expect = 0.0
 Identities = 873/1874 (46%), Positives = 1160/1874 (61%), Gaps = 111/1874 (5%)
 Frame = +2

Query: 2    FRYGDKNCRPLLPAEVMTILRKIPADTRKKLLAKRCFPQEGYVLQYLPVPPNCLSVPDIS 181
            +RYG  + R LLP E M I+++IP +T+KKL  K  FPQ+GYVL+YLPVPPNCLSVP++S
Sbjct: 169  YRYGGDHTRALLPCEAMEIIKRIPIETKKKLAGKGYFPQDGYVLKYLPVPPNCLSVPEVS 228

Query: 182  DGTNIMSRDHSISLLKRVLKQIEDIKNSRSGMPNFESHLVESNELQVAVAQYFQFRGTGK 361
            DG ++MS D SI++L+++L+++E IK+SRSG PNFESH VE+N+LQ  V QYFQ RGT K
Sbjct: 229  DGVSVMSSDPSITILRKLLRKVEIIKSSRSGEPNFESHHVEANDLQSVVDQYFQIRGTSK 288

Query: 362  ATRDVDTRFGVTKESNTSSTKAWLEKMKTLFIRKSSGFSSRSVITGDPYIGINEIGLPFE 541
              RD++T FGV KE   SSTKAWLEKM+TLFIRK SGFSSR+VITGD Y  INE+G+P E
Sbjct: 289  PARDIETHFGVNKELTASSTKAWLEKMRTLFIRKGSGFSSRNVITGDCYKRINEVGIPVE 348

Query: 542  IAQKITFEERVSQHNLNYLQKLVDEKLCLTYRDGMSTYSLREGSKGHTFLRSGQVVHRRI 721
            +AQ+ITFEERV+ HN+ YLQKLVDE LCLTY++G STYSLREGSKGH +L+ GQ+VHRRI
Sbjct: 349  VAQRITFEERVNIHNIRYLQKLVDEHLCLTYKEGGSTYSLREGSKGHIYLKPGQIVHRRI 408

Query: 722  MDGDMVFINRPPTTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLA 901
            MDGD+VFINRPPTTHKHSLQAL VYIH+DHTVKINPLICGPL ADFDGDC+HLFYPQSLA
Sbjct: 409  MDGDIVFINRPPTTHKHSLQALYVYIHEDHTVKINPLICGPLGADFDGDCVHLFYPQSLA 468

Query: 902  ARAEVLELFSVEKQLLSSHTGNFNLQLATDSLLSLKLMFKKYFFGRVAAQQLMMFVPTLL 1081
            A+AEV+ELFSVE QLLSSH+GN NLQL+TDSLLSLK++ K+ FF R AA QL MF+   L
Sbjct: 469  AKAEVVELFSVENQLLSSHSGNLNLQLSTDSLLSLKMLVKRCFFDRAAANQLAMFILLPL 528

Query: 1082 NDPAVIKNHSSGPLWTVLQMLQAALPPSFACSGERYLTHKNELVKFDFNRDLVQSTFTDV 1261
              PA++K  S    WT +Q+LQ ALP  F C+G RYL  ++E+++F+F+RD++ +T  ++
Sbjct: 529  PRPALLKASSGDACWTSIQILQCALPLGFDCTGGRYLIRQSEILEFEFSRDVLPATVNEI 588

Query: 1262 VTSILFSEGPKVVVSFFNSLTPLLMEYLHSEGFSVCLEDFYIPKASIDSVQESVKNISPL 1441
              S+ F +GPK  ++FF+ L P LME L +EGFSV LE+F I +A    +++S+  +S L
Sbjct: 589  AASVFFGKGPKEALNFFDVLQPFLMESLFAEGFSVSLEEFSISRAIKRIIRKSIGKVSSL 648

Query: 1442 LYHMRSSHSEPLQLEMSSYLRGVRLHILNTVLQSSAIGFLIDSRSESALSKVAQQIGFLG 1621
            LY +RS ++E +  ++  ++R V L I+N  L+S+ +G LIDS+S+SA+ KV QQIGFLG
Sbjct: 649  LYQLRSLYNELVAQQLEKHIRDVELPIINFALKSTKLGDLIDSKSKSAIDKVVQQIGFLG 708

Query: 1622 MQLSDKGKFYSKTLVSDLALLFHRK--YPSVDDYPSEEFGLVGSCLFNGLDPYQEMVHXX 1795
             QL D+G+FYSK LV D+A  FH K  Y   D YPS E+GL+  C FNGLDPY+EMVH  
Sbjct: 709  QQLFDRGRFYSKGLVDDVASHFHAKCCYDG-DGYPSAEYGLLKGCFFNGLDPYEEMVHSI 767

Query: 1796 XXXXXXXXXXXGLTEPGTLFKNLMAILRDVVICYDGTVRNVSANSIIQFQYGTSNEFTFN 1975
                       GL+EPGTLFKNLMAILRDVVICYDGTVRN+ +NSIIQF+YG        
Sbjct: 768  STREIMVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQFEYGIQAGDKSE 827

Query: 1976 NEFGAGEPVGVLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNEVSDRRILL 2155
            + F AGEPVGVLAATAMSNPAYKAVLD        WE+MKEILLC VNF+NE+ DRR++L
Sbjct: 828  HLFPAGEPVGVLAATAMSNPAYKAVLDASPSSNSSWELMKEILLCKVNFRNELVDRRVIL 887

Query: 2156 YLKDCDCGRTYCREKAACIIKNQLRKVSLKDAAVELLIEYKQQ-SLYEGLEIVSGLLGHI 2332
            YL DCDCG +YCRE AA  +K+QLRKVSLKDAAVE +IEY+QQ +  E  E   GL+GHI
Sbjct: 888  YLNDCDCGGSYCRENAAYSVKDQLRKVSLKDAAVEFIIEYQQQRTQKENSETDVGLVGHI 947

Query: 2333 HLNEALLRSSYISMNEILSKCEDMISSLQKQKKDGHLFKKVTLEVSDCCSFQH------- 2491
            +L+E +L    ISM  +  KC + + S  ++KK     K + L  S      H       
Sbjct: 948  YLDEMMLEELKISMAYVFDKCHERLKSFSQKKKVNQSLKNIELSFSLFVGLYHFLIMFHL 1007

Query: 2492 -----SSKTYPVPCLTIWLKASYVDDLAKTSHDLTEKICPPILETVIKGDPRVSTVNIIW 2656
                 SS     PCLT WLK +Y  DL      L EKICP + +T+I+GDPR+S+ +IIW
Sbjct: 1008 SSESCSSSHPAAPCLTFWLK-NYDSDLDNAVKVLAEKICPVLFKTIIQGDPRISSASIIW 1066

Query: 2657 INPDTPTWIRSTNKSQKGELALDVVLEKRSVRQTGDSWRVVMDSCLSVLHLIDTNRSIPY 2836
            ++PDT TW+R+  KS  GELALD++LEK +V+Q+GD+WRVV+D+CL VLHLIDT RSIPY
Sbjct: 1067 VSPDTNTWVRNPYKSSNGELALDIILEKEAVKQSGDAWRVVLDACLPVLHLIDTRRSIPY 1126

Query: 2837 AIKQVQELLGISCAFEQAVQRLSTSVTMVTKGVLKDHLVLLANSMTCAGNLIGFNSGGIK 3016
            AIKQ+QELLGISC F+QA+QR++ SV MV KGVL++HL+LLA+SMTC GNL+GFN GG K
Sbjct: 1127 AIKQIQELLGISCTFDQAIQRVAASVKMVAKGVLREHLILLASSMTCGGNLVGFNIGGYK 1186

Query: 3017 ALAQSLNVQVPFMEATLSAPRKCFERAAEKCHVDSLSSVVASCSWGKQVAVGTGSAFDIL 3196
            AL++ LN+QVPF +ATL  P+KCFERAAEKCH DSLSS+VASCSWGK VAVGTGS FD++
Sbjct: 1187 ALSRQLNIQVPFTDATLFTPKKCFERAAEKCHTDSLSSIVASCSWGKHVAVGTGSKFDVV 1246

Query: 3197 FDTRKVELNQPDGVDMYDFLQLVRGGSSGEETSTACIGTEIENLDLDDEAMDSELSPVRE 3376
            +D  +++ N+ +G+D+Y FL +V+  ++GEE + AC+G +I++L L++E MD  +SP   
Sbjct: 1247 WDANEIKSNEIEGMDVYSFLHMVKSFTNGEEETDACLGEDIDDL-LEEEYMDLGMSPQHN 1305

Query: 3377 PG-QPTFEDRPE-LSDRLENPVLEVSNSGEHQWKSDPPQTAELSGSWDWANKGQ-SNGVT 3547
             G +  FE+ PE L+    N     SN GE        +T E SG W  +NK +  +G +
Sbjct: 1306 SGFEAVFEENPEVLNGSTSNGWDVSSNQGE-------SKTNEWSG-WASSNKAEIKDGRS 1357

Query: 3548 TVASDSAWSGWGN----GVGNKVXXXXXXXXXXXXXXXWTV-----RETERNWKQSG--- 3691
             +A  ++W    N       N                 W+       E    W  S    
Sbjct: 1358 EIAPKNSWGKTVNQEDSSKSNPWSTSTIADQTKTKSNEWSAWGSNKSEIPVGWASSNKTE 1417

Query: 3692 ----------SSTWGRKVESECDS-----------PRASERSGNWEEATDKAQNIGTSGA 3808
                       ++WG+ V  E  S             A+ +S  W         I   G+
Sbjct: 1418 IKDGRSETAQENSWGKTVNQEDSSKSNAWNTSTTVDHANTKSNEWSAWGSNQSEIPAGGS 1477

Query: 3809 ASDSARSHWGSDSVDTESLQQKTLKCGEWCKKEPQNIGKQSGSS--SAWGKKFDAERDSP 3982
             +    S WGS     +  Q+   + G W      N   Q+ SS  S WGKK D  ++  
Sbjct: 1478 KAVQEDS-WGSSKWKADVAQEDNSRLGAW----DANAADQTKSSEWSGWGKKKDVTQED- 1531

Query: 3983 LMDKSIGGWDQKIGKSQNGEAHRAALDSSWSGWGSVQ-VTKED-SLLNKVVENGTEETLS 4156
              +  +G WD          A        WSGWG  + +T+ED S L     N  ++T S
Sbjct: 1532 --NSRLGAWD--------ANAADQTKSRDWSGWGKKKDITQEDNSRLGAWDANAADQTKS 1581

Query: 4157 IGKQSGPSPSRGQMFDSLRSSPLGGWDQKINKVQSAEAHKSAPNSEWSSWG-SRQVLKED 4333
              + SG    +    +   +S LG WD       +A+  KS   +EWS WG  ++V +ED
Sbjct: 1582 -SEWSGWGKKKDVTQED--NSRLGAWD-----ANTADQTKS---NEWSGWGKKKEVTQED 1630

Query: 4334 SL------PNKLQQISPNHNGCSIEEHQNIGKPSGSSSAWELDC-DSGRNSMLGGWDQKI 4492
            +        N   Q   N      ++ +   + +    AW+ +  D  +++   GW +K 
Sbjct: 1631 NSRLGAWDANTADQTKSNEWSGWGKKKEVTQEDNSRFGAWDANAEDQTKSNEWSGWGKKK 1690

Query: 4493 DKGQNVETQRSA--ANSG-------WSGWG--QDSGNQSVSSSGWGKNIDTDGVSPLAAK 4639
            D  Q   ++  A  AN+        WS WG  ++   +      WG     D V+     
Sbjct: 1691 DVTQEDNSRLGAWDANAADQTKSNEWSDWGKKKEVTQEDNVQDSWGSGKRKDKVTQEDNS 1750

Query: 4640 SSGGWGQK-----ESVKLVGSSWGKKVS----------SNDAWIKMHENHDLARPMAPNH 4774
             SGGWG       +S     SSWGK  S           ND+W       D  +  + + 
Sbjct: 1751 GSGGWGANRTDLAKSKSSEWSSWGKNKSEIPAGGSENVQNDSWGSGKLEDDTQKENSGSA 1810

Query: 4775 SEFSNREIDTVHIEDTLPNRIEEGSLKSD-------------VETIRFENDEEKNKSDCA 4915
               +  E      E    +    G+ K++              E+  +++  + N++  +
Sbjct: 1811 WVRNKAETIDGGSEKPQEDAWNSGNWKAESKVGNASWGKPKSSESQAWDSHNQSNQNSSS 1870

Query: 4916 PSWGS---SRDAQS----QWGK--RKWSKGDAIKNSQGWGSPSSGEWRNKRNHPTKAFDN 5068
              W S   S +++S    QWGK  R   K +  + SQG GS ++G+W+N RN P +A   
Sbjct: 1871 QGWESHIASANSESEKGFQWGKQGRDSFKKNRFEGSQGRGS-NAGDWKN-RNRPPRA--- 1925

Query: 5069 FKANGPLTLTKQRLDLFTVEEQDVLSDIEKMMQNIRRIMHQTGYNDGDPLSADDQSYIVD 5248
                       QRLD+++  EQDVL DIE +MQ+IRRIM Q GYNDGDPL+A+DQ ++++
Sbjct: 1926 ---------PGQRLDIYSSGEQDVLKDIEPIMQSIRRIMQQQGYNDGDPLAAEDQLFVLE 1976

Query: 5249 YVLNYHPDKALKIG 5290
             V  +HPDK  K+G
Sbjct: 1977 NVFEHHPDKETKMG 1990



 Score = 89.4 bits (220), Expect = 1e-14
 Identities = 38/63 (60%), Positives = 49/63 (77%)
 Frame = +1

Query: 5362 GIQYIMVSKHANFQDTRCFYVVSTDDHKQDFSYRKSLENFAREKYPDKAEGFLAKYFRRP 5541
            GI Y+MV+KH++FQ++RCFYVV  D   +DFSYRK L N+  +KYPD AE FL KYFR+P
Sbjct: 1992 GIDYVMVNKHSSFQESRCFYVVCKDGESKDFSYRKCLANYISKKYPDLAESFLGKYFRKP 2051

Query: 5542 QPR 5550
            + R
Sbjct: 2052 RAR 2054