BLASTX nr result

ID: Cephaelis21_contig00006307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006307
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001061632.1| Os08g0359600 [Oryza sativa Japonica Group] g...   154   2e-35
ref|XP_004137151.1| PREDICTED: 30S ribosomal protein S17-like is...   154   3e-35
ref|XP_002273671.1| PREDICTED: 30S ribosomal protein S17 [Vitis ...   153   6e-35
gb|AFK45737.1| unknown [Lotus japonicus] gi|388520851|gb|AFK4848...   152   7e-35
gb|AFK44187.1| unknown [Lotus japonicus]                              152   7e-35

>ref|NP_001061632.1| Os08g0359600 [Oryza sativa Japonica Group]
           gi|38637534|dbj|BAD03787.1| putative ribosomal protein
           S17 [Oryza sativa Japonica Group]
           gi|38637560|dbj|BAD03811.1| putative ribosomal protein
           S17 [Oryza sativa Japonica Group]
           gi|113623601|dbj|BAF23546.1| Os08g0359600 [Oryza sativa
           Japonica Group] gi|125561261|gb|EAZ06709.1| hypothetical
           protein OsI_28953 [Oryza sativa Indica Group]
           gi|125603150|gb|EAZ42475.1| hypothetical protein
           OsJ_27042 [Oryza sativa Japonica Group]
           gi|215697959|dbj|BAG92125.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 107

 Score =  154 bits (390), Expect = 2e-35
 Identities = 71/97 (73%), Positives = 85/97 (87%)
 Frame = +2

Query: 98  MKPVVGMVVSNKMQKSVVVAVDRLFHHKVYNRYVRRTSKFMAHDEHNECNIGDRVKLNPS 277
           MKPVVG+VVSNKMQKSVVVAVDRLFHHK+YNRYV+RTSKFMAHDE  +CNIGDRVKL+PS
Sbjct: 1   MKPVVGIVVSNKMQKSVVVAVDRLFHHKMYNRYVKRTSKFMAHDETEDCNIGDRVKLDPS 60

Query: 278 KPISKRKFWIVAEILKKARIYTPQASMVATPGSTGMT 388
           +P+SKRK W+VAEIL++A++Y+P A+  A     G T
Sbjct: 61  RPLSKRKHWVVAEILRRAKVYSPSAAAAAVSAQPGAT 97


>ref|XP_004137151.1| PREDICTED: 30S ribosomal protein S17-like isoform 1 [Cucumis
           sativus] gi|449515672|ref|XP_004164872.1| PREDICTED: 30S
           ribosomal protein S17-like isoform 1 [Cucumis sativus]
          Length = 124

 Score =  154 bits (388), Expect = 3e-35
 Identities = 73/93 (78%), Positives = 84/93 (90%)
 Frame = +2

Query: 68  GFRPNRKEEKMKPVVGMVVSNKMQKSVVVAVDRLFHHKVYNRYVRRTSKFMAHDEHNECN 247
           GFR   +  KMK VVGMVVSNKMQKSVVVAVDRLF+HK+YNRYV+RTSKFMAHDE+N+CN
Sbjct: 12  GFRVFNRWTKMKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCN 71

Query: 248 IGDRVKLNPSKPISKRKFWIVAEILKKARIYTP 346
           IGDRVKL+PS+P+SK K W+VAEIL+KARIY P
Sbjct: 72  IGDRVKLDPSRPLSKHKHWVVAEILRKARIYEP 104


>ref|XP_002273671.1| PREDICTED: 30S ribosomal protein S17 [Vitis vinifera]
           gi|297745104|emb|CBI38943.3| unnamed protein product
           [Vitis vinifera]
          Length = 99

 Score =  153 bits (386), Expect = 6e-35
 Identities = 72/92 (78%), Positives = 82/92 (89%)
 Frame = +2

Query: 98  MKPVVGMVVSNKMQKSVVVAVDRLFHHKVYNRYVRRTSKFMAHDEHNECNIGDRVKLNPS 277
           MKPVVGMVVSNKMQKSVVVAVDRLFH+K++NRYV+RTSKFMAHDEHN CNIGDRV+L+PS
Sbjct: 1   MKPVVGMVVSNKMQKSVVVAVDRLFHNKLFNRYVKRTSKFMAHDEHNLCNIGDRVRLDPS 60

Query: 278 KPISKRKFWIVAEILKKARIYTPQASMVATPG 373
           +P+SK K W+VAEILKKARIY P   +  T G
Sbjct: 61  RPLSKHKHWVVAEILKKARIYVPPEPIAKTQG 92


>gb|AFK45737.1| unknown [Lotus japonicus] gi|388520851|gb|AFK48487.1| unknown
           [Lotus japonicus]
          Length = 102

 Score =  152 bits (385), Expect = 7e-35
 Identities = 73/86 (84%), Positives = 79/86 (91%)
 Frame = +2

Query: 98  MKPVVGMVVSNKMQKSVVVAVDRLFHHKVYNRYVRRTSKFMAHDEHNECNIGDRVKLNPS 277
           MK VVGMVVSNKMQKSVVVAVDRLFHHKVYNRYV+RTSKFMAHDE+N CNIGDRV+LNPS
Sbjct: 1   MKQVVGMVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNLCNIGDRVRLNPS 60

Query: 278 KPISKRKFWIVAEILKKARIYTPQAS 355
           +P+SK K W+VAEILKKARIY P  S
Sbjct: 61  RPLSKNKCWVVAEILKKARIYVPPTS 86


>gb|AFK44187.1| unknown [Lotus japonicus]
          Length = 88

 Score =  152 bits (385), Expect = 7e-35
 Identities = 73/86 (84%), Positives = 79/86 (91%)
 Frame = +2

Query: 98  MKPVVGMVVSNKMQKSVVVAVDRLFHHKVYNRYVRRTSKFMAHDEHNECNIGDRVKLNPS 277
           MK VVGMVVSNKMQKSVVVAVDRLFHHKVYNRYV+RTSKFMAHDE+N CNIGDRV+LNPS
Sbjct: 1   MKQVVGMVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNLCNIGDRVRLNPS 60

Query: 278 KPISKRKFWIVAEILKKARIYTPQAS 355
           +P+SK K W+VAEILKKARIY P  S
Sbjct: 61  RPLSKHKCWVVAEILKKARIYVPPTS 86


Top