BLASTX nr result

ID: Cephaelis21_contig00006279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006279
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB86282.1| ubiquitin-conjugating protein-like [Solanum tuber...    60   4e-07
ref|NP_001233964.1| ubiquitin conjugating enzyme [Solanum lycope...    60   4e-07
gb|ABB87105.1| ubiquitin conjugating enzyme-like [Solanum tubero...    59   1e-06
ref|XP_004138029.1| PREDICTED: ubiquitin-conjugating enzyme E2 2...    56   5e-06

>gb|ABB86282.1| ubiquitin-conjugating protein-like [Solanum tuberosum]
          Length = 194

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 31/57 (54%), Positives = 38/57 (66%)
 Frame = +2

Query: 455 MDLARVQKELTECNKEVEVPGICVSLKSNSXXXXXXXXXXXXXXXYEGGSFKIDITL 625
           +DLARVQKEL ECN++V+V GI V+LK +S               YEGG+FKIDITL
Sbjct: 2   VDLARVQKELHECNRDVQVSGINVTLKGDSLTHLIGTIPGPVGTPYEGGTFKIDITL 58


>ref|NP_001233964.1| ubiquitin conjugating enzyme [Solanum lycopersicum]
           gi|886679|emb|CAA58111.1| ubiquitin conjugating enzyme
           [Solanum lycopersicum]
          Length = 194

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 31/57 (54%), Positives = 38/57 (66%)
 Frame = +2

Query: 455 MDLARVQKELTECNKEVEVPGICVSLKSNSXXXXXXXXXXXXXXXYEGGSFKIDITL 625
           +DLARVQKEL ECN++V+V GI V+LK +S               YEGG+FKIDITL
Sbjct: 2   VDLARVQKELHECNRDVQVSGINVTLKGDSLTHLIGTIPGPVGTPYEGGTFKIDITL 58


>gb|ABB87105.1| ubiquitin conjugating enzyme-like [Solanum tuberosum]
          Length = 194

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 30/57 (52%), Positives = 37/57 (64%)
 Frame = +2

Query: 455 MDLARVQKELTECNKEVEVPGICVSLKSNSXXXXXXXXXXXXXXXYEGGSFKIDITL 625
           +DL RVQKEL ECN++V+V GI V+LK +S               YEGG+FKIDITL
Sbjct: 2   VDLTRVQKELHECNRDVQVSGINVTLKGDSLTHLIGTIPGPVGTPYEGGTFKIDITL 58


>ref|XP_004138029.1| PREDICTED: ubiquitin-conjugating enzyme E2 27-like [Cucumis
           sativus] gi|449501428|ref|XP_004161363.1| PREDICTED:
           ubiquitin-conjugating enzyme E2 27-like [Cucumis
           sativus]
          Length = 194

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/61 (47%), Positives = 36/61 (59%)
 Frame = +2

Query: 455 MDLARVQKELTECNKEVEVPGICVSLKSNSXXXXXXXXXXXXXXXYEGGSFKIDITLPGS 634
           +D ARVQKEL EC K++E  GI V+ KS+S               YEGG F+IDITLP  
Sbjct: 2   IDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPDG 61

Query: 635 H 637
           +
Sbjct: 62  Y 62


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