BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006235
         (1161 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containi...   505   e-141
ref|XP_002527150.1| pentatricopeptide repeat-containing protein,...   481   e-133
ref|XP_002328265.1| predicted protein [Populus trichocarpa] gi|2...   476   e-132
ref|NP_179305.2| pentatricopeptide repeat-containing protein [Ar...   442   e-121
ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. l...   439   e-121

>ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
            [Vitis vinifera] gi|297744485|emb|CBI37747.3| unnamed
            protein product [Vitis vinifera]
          Length = 878

 Score =  505 bits (1301), Expect = e-141
 Identities = 242/372 (65%), Positives = 305/372 (81%)
 Frame = -2

Query: 1157 SPNDYTLNVLLHSLLKEGKISEAEKLLQKMNEGGHDLGIVSCNIVIDGLCRSGRVDRAVE 978
            SPN YT N+LLHSL KEG+I EAEKLLQKMNE  +DL  V+CNIVIDGLC+SG++D AVE
Sbjct: 432  SPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVE 491

Query: 977  ITGEFWSHGSAALGNLGNSFIGLVDEGNNGRKCSPDLITYSIVIHGLCNDGRLVEAKKIF 798
            I    W HGSAALGNLGNSFIGLVD  +NG+KC PDLITYSI+I+GLC  GRL EA+K F
Sbjct: 492  IVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKF 551

Query: 797  IEMMQKNLYPDSVVYNTFLHNLCKRGKVSMAFQVLKDMEKRGCNKTLQTYNSLMLGLRSK 618
            IEM+ K+L+PDS++Y+TF+H+ CK GK+S AF+VLKDMEKRGCNK+LQTYNSL+LGL SK
Sbjct: 552  IEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSK 611

Query: 617  NQIFEMCGLMDEMREYGISPNVFSYNTIISCLCEAGRTEEATSLLEEMLEKGIIPNAHSF 438
            NQIFE+ GL+D+M+E GI+PN+ +YN +ISCLCE GR ++ATSLL+EML+KGI PN  SF
Sbjct: 612  NQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSF 671

Query: 437  KLLIEALCRSGEFRPAMDVFDIGLSICGQIKTLYVVMFNEMLAGGEILVAKKLLEAAIER 258
            +LLI+A C++ +F    +VF+I LSICG  + LY +MFNE+L GGE+  AK+L +AA++R
Sbjct: 672  RLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDR 731

Query: 257  CFGLGSFPCKDLIDRLSEDDRLEEAFDILKKMVYNGYGFDPASFMPVIDALTRRGRKQEA 78
            CF LG+F   DLI++L +D+ LE A DIL KM+  GY FDPASFMPVID L +RG+K +A
Sbjct: 732  CFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDA 791

Query: 77   DELVERMLNKAA 42
            DEL ERM++ A+
Sbjct: 792  DELAERMMDMAS 803



 Score =  155 bits (392), Expect = 2e-35
 Identities = 105/372 (28%), Positives = 178/372 (47%), Gaps = 5/372 (1%)
 Frame = -2

Query: 1157 SPNDYTLNVLLHSLLKEGKISEAEKLLQKMNEGGHDLGIVSCNIVIDGLCRSGRVDRAVE 978
            SP  YTLN+L+  L   G+  +A ++  KM   G      S  I++ G CR+G   RA+E
Sbjct: 148  SPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALE 207

Query: 977  ITGEFWSHGSAALGNLGNSFIGLVDEGNNGRKCSPDLITYSIVIHGLCNDGRLVEAKKIF 798
            +     S G                         P+ + Y+ +I   C +GR  EA+++ 
Sbjct: 208  LLDGMGSFG-----------------------VQPNKVIYNTLISSFCREGRNEEAERLV 244

Query: 797  IEMMQKNLYPDSVVYNTFLHNLCKRGKVSMAFQVLKDM---EKRGCNK-TLQTYNSLMLG 630
              M +  L+PD V +N+ +  LC  GK+  A ++ +DM   E+ G  +  + T+N ++ G
Sbjct: 245  ERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEG 304

Query: 629  LRSKNQIFEMCGLMDEMREYGISPNVFSYNTIISCLCEAGRTEEATSLLEEMLEKGIIPN 450
               +  + E   L++ M+  G    + SYN  +  L   G+  EA   L+EM++KGI PN
Sbjct: 305  FCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPN 364

Query: 449  AHSFKLLIEALCRSGEFRPAMDVFDIGLSI-CGQIKTLYVVMFNEMLAGGEILVAKKLLE 273
             +SF  +++ LC++G    A  +  + +S   G     Y  + +   + G++L A  +L 
Sbjct: 365  IYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILH 424

Query: 272  AAIERCFGLGSFPCKDLIDRLSEDDRLEEAFDILKKMVYNGYGFDPASFMPVIDALTRRG 93
              + R     ++ C  L+  L ++ R+ EA  +L+KM    Y  D  +   VID L + G
Sbjct: 425  EMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSG 484

Query: 92   RKQEADELVERM 57
            +  EA E+VE M
Sbjct: 485  KLDEAVEIVEGM 496



 Score =  124 bits (311), Expect = 5e-26
 Identities = 100/417 (23%), Positives = 180/417 (43%), Gaps = 42/417 (10%)
 Frame = -2

Query: 1154 PNDYTLNVLLHSLLKEGKISEAEKLLQKMNEGGHDLGIVSCNIVIDGLCRSGRVDRAVEI 975
            PN    N L+ S  +EG+  EAE+L+++M E G    +V+ N  I  LC +G++  A  I
Sbjct: 219  PNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRI 278

Query: 974  TGEFWSHGSAALGNLGNSFIGLVDEG------------------NNGRKCSPDLITYSIV 849
              +        L     +   L+ EG                   NG     +L +Y+I 
Sbjct: 279  FRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLM--ELESYNIW 336

Query: 848  IHGLCNDGRLVEAKKIFIEMMQKNLYPDSVVYNTFLHNLCKRGKVSMAFQVLKDMEKRGC 669
            + GL  +G+L+EA+    EM+ K + P+   +NT +  LCK G +S A  ++  M   G 
Sbjct: 337  LLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGI 396

Query: 668  NKTLQTYNSLMLGLRSKNQIFEMCGLMDEMREYGISPNVFSYNTIISCLCEAGRTEEATS 489
                 TY++L+ G  S  ++ +   ++ EM   G SPN ++ N ++  L + GR  EA  
Sbjct: 397  GPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEK 456

Query: 488  LLEEMLEKGIIPNAHSFKLLIEALCRSGEFRPAMDVFD------------IGLSICGQIK 345
            LL++M E+    +  +  ++I+ LC+SG+   A+++ +            +G S  G + 
Sbjct: 457  LLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVD 516

Query: 344  T------------LYVVMFNEMLAGGEILVAKKLLEAAIERCFGLGSFPCKDLIDRLSED 201
            +             Y ++ N +   G +  A+K     + +     S      I    + 
Sbjct: 517  SSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKH 576

Query: 200  DRLEEAFDILKKMVYNGYGFDPASFMPVIDALTRRGRKQEADELVERMLNKAAVDKV 30
             ++  AF +LK M   G      ++  +I  L  + +  E   L++ M  K     +
Sbjct: 577  GKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNI 633



 Score =  107 bits (266), Expect = 7e-21
 Identities = 95/370 (25%), Positives = 165/370 (44%), Gaps = 6/370 (1%)
 Frame = -2

Query: 1142 TLNVLLHSLLKEGKISEAEKLLQKMNEGGHDLGIVSCNIVIDGLCRSGRVDRAVEITGEF 963
            ++ ++ H L++   IS+ + L Q + +   ++  VS   +I  L +SG  D A     +F
Sbjct: 46   SIPIITHILIRAKMISQIDHLQQLLLQQPQEVSHVSLIALIRILAKSGLSDLAFS---QF 102

Query: 962  WSHGSAALGNLGNSFIGLVDEGNNGRKCSPDLITYSIVIHGLCNDGRLVEAKKIFIEMMQ 783
             S  S    N                   P +  Y++V+     + ++     ++ +M+ 
Sbjct: 103  QSFRSQVPAN------------------PPPVYLYNMVLESSLREDKVDSFSWLYKDMVV 144

Query: 782  KNLYPDSVVYNTFLHNLCKRGKVSMAFQVLKDMEKRGCNKTLQTYNSLMLGLRSKNQIFE 603
              + P++   N  +  LC  G+   A +V   M  +GC     ++  L+ G         
Sbjct: 145  AGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMR 204

Query: 602  MCGLMDEMREYGISPNVFSYNTIISCLCEAGRTEEATSLLEEMLEKGIIPNAHSFKLLIE 423
               L+D M  +G+ PN   YNT+IS  C  GR EEA  L+E M E G+ P+  +F   I 
Sbjct: 205  ALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRIS 264

Query: 422  ALCRSGEFRPAMDVF-DIGLSICGQIKTLYVVMFNEMLAG----GEILVAKKLLEAAIER 258
            ALC +G+   A  +F D+ +     +    +  FN ML G    G +  AK L+E +++R
Sbjct: 265  ALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVE-SMKR 323

Query: 257  CFGLGSFPCKDL-IDRLSEDDRLEEAFDILKKMVYNGYGFDPASFMPVIDALTRRGRKQE 81
               L      ++ +  L  + +L EA   LK+MV  G   +  SF  V+D L + G   +
Sbjct: 324  NGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISD 383

Query: 80   ADELVERMLN 51
            A  ++  M++
Sbjct: 384  ARMIMGLMIS 393


>ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223533489|gb|EEF35232.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 874

 Score =  481 bits (1237), Expect = e-133
 Identities = 226/372 (60%), Positives = 296/372 (79%)
 Frame = -2

Query: 1157 SPNDYTLNVLLHSLLKEGKISEAEKLLQKMNEGGHDLGIVSCNIVIDGLCRSGRVDRAVE 978
            SPN YT NVLLHSL KEG+ISEAE LLQKMNE G+ +  V+CNI+I+ LC +G++D+A+E
Sbjct: 428  SPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIE 487

Query: 977  ITGEFWSHGSAALGNLGNSFIGLVDEGNNGRKCSPDLITYSIVIHGLCNDGRLVEAKKIF 798
            I    W+HGSAALGNLGNSFIGLVD+  +G+KC+PDL+TYS +I GLC  GRL +AKK F
Sbjct: 488  IVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKF 547

Query: 797  IEMMQKNLYPDSVVYNTFLHNLCKRGKVSMAFQVLKDMEKRGCNKTLQTYNSLMLGLRSK 618
            IEMM K L PDS +Y+TF+H+ C+ GK+S AFQVLKDMEKRGCNKTLQTYNSL+LGL SK
Sbjct: 548  IEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSK 607

Query: 617  NQIFEMCGLMDEMREYGISPNVFSYNTIISCLCEAGRTEEATSLLEEMLEKGIIPNAHSF 438
            NQIFE+ GL+DEMRE G+SP+V +YN +++CLCE GR  +A S+L+EML+KGI PN  SF
Sbjct: 608  NQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSF 667

Query: 437  KLLIEALCRSGEFRPAMDVFDIGLSICGQIKTLYVVMFNEMLAGGEILVAKKLLEAAIER 258
            ++LI+A C++ +F+ + +VF+I L++CG  + LY +MFNE+L GG++  AK+L E A++R
Sbjct: 668  RILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDR 727

Query: 257  CFGLGSFPCKDLIDRLSEDDRLEEAFDILKKMVYNGYGFDPASFMPVIDALTRRGRKQEA 78
             F +G+F  KDLIDRL +D++LE A D+L +++  GY FDPASFMPVID   + G K  A
Sbjct: 728  SFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVA 787

Query: 77   DELVERMLNKAA 42
            DEL ERM+  A+
Sbjct: 788  DELAERMMEMAS 799



 Score =  140 bits (352), Expect = 8e-31
 Identities = 99/374 (26%), Positives = 178/374 (47%), Gaps = 7/374 (1%)
 Frame = -2

Query: 1157 SPNDYTLNVLLHSLLKEGKISEAEKLLQKMNEGGHDLGIVSCNIVIDGLCRSGRVDRAVE 978
            SP  YT N+L+  L   G + +A +L  KM   G +    +  I++ G CR+G   + +E
Sbjct: 144  SPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLE 203

Query: 977  ITGEFWSHGSAALGNLGNSFIGLVDEGNNGRKCSPDLITYSIVIHGLCNDGRLVEAKKIF 798
            + G+  + G                         P+ + Y+ +I   C +G+  +A+K+ 
Sbjct: 204  LLGQMRTMG-----------------------ILPNNVLYNTLISSFCKEGKTHDAEKLV 240

Query: 797  IEMMQKNLYPDSVVYNTFLHNLCKRGKVSMAFQVLKDM---EKRGC-NKTLQTYNSLMLG 630
             +M +  L P    +N+ +  LC  GK+  A ++ +DM   E+ G  +  + TY  +++G
Sbjct: 241  DKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMG 300

Query: 629  LRSKNQIFEMCGLMDEMREYGISPNVFSYNTIISCLCEAGRTEEATSLLEEMLEKGIIPN 450
               +  + E   L+D M+      N+ SYN  +  L   G+  EA  +L+EML  GI P+
Sbjct: 301  FCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPD 360

Query: 449  AHSFKLLIEALCRSGEFRPAMDVFDIGLSICGQI---KTLYVVMFNEMLAGGEILVAKKL 279
             +S+ ++++ LC++G    A  +  +GL I   I      Y  + +   + G++  A  L
Sbjct: 361  IYSYNIVMDGLCKNGMLSDARML--MGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNL 418

Query: 278  LEAAIERCFGLGSFPCKDLIDRLSEDDRLEEAFDILKKMVYNGYGFDPASFMPVIDALTR 99
            L   I       ++ C  L+  L ++ R+ EA ++L+KM   GYG D  +   +I+AL  
Sbjct: 419  LHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCN 478

Query: 98   RGRKQEADELVERM 57
             G+  +A E+V  M
Sbjct: 479  NGQLDKAIEIVNGM 492



 Score =  130 bits (327), Expect = 6e-28
 Identities = 111/409 (27%), Positives = 188/409 (45%), Gaps = 40/409 (9%)
 Frame = -2

Query: 1154 PNDYTLNVLLHSLLKEGKISEAEKLLQKMNEGGHDLGIVSCNIVIDGLCRSGRVDRAVEI 975
            PN+   N L+ S  KEGK  +AEKL+ KM E G    + + N  I  LC SG++  A  I
Sbjct: 215  PNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRI 274

Query: 974  TGEFWSHGSAALGN----------LGNSFIGLVDEGN---NGRKCSPDLI---TYSIVIH 843
              +        L +          +G    G+++E     +  K + + I   +Y+I + 
Sbjct: 275  FRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLL 334

Query: 842  GLCNDGRLVEAKKIFIEMMQKNLYPDSVVYNTFLHNLCKRGKVSMAFQVLKDMEKRGCNK 663
            GL  +G+L+EA  +  EM+   + PD   YN  +  LCK G +S A  ++  M + G   
Sbjct: 335  GLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILP 394

Query: 662  TLQTYNSLMLGLRSKNQIFEMCGLMDEMREYGISPNVFSYNTIISCLCEAGRTEEATSLL 483
               TY++L+ G  SK ++FE   L+ EM     SPN ++ N ++  L + GR  EA +LL
Sbjct: 395  DTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLL 454

Query: 482  EEMLEKGIIPNAHSFKLLIEALCRSGEFRPAMDVFD-----------------IGL---S 363
            ++M EKG   +  +  ++I ALC +G+   A+++ +                 IGL   +
Sbjct: 455  QKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDT 514

Query: 362  ICGQIKTLYVVMFNEMLAG----GEILVAKKLLEAAIERCFGLGSFPCKDLIDRLSEDDR 195
            I G+  T  +V ++ +++G    G +  AKK     + +     S      I     + +
Sbjct: 515  ISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGK 574

Query: 194  LEEAFDILKKMVYNGYGFDPASFMPVIDALTRRGRKQEADELVERMLNK 48
            +  AF +LK M   G      ++  +I  L  + +  E   L++ M  K
Sbjct: 575  ISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREK 623



 Score =  102 bits (255), Expect = 1e-19
 Identities = 73/296 (24%), Positives = 144/296 (48%), Gaps = 10/296 (3%)
 Frame = -2

Query: 884  KCSPDLITYSIVIHGLCNDGRLVEAKKIFIEMMQKNLYPDSVVYNTFLHNLCKRGKVSMA 705
            + SP+  T++++I  LC+ G L +A+++F +M  +   P+   +   +   C+ G  S  
Sbjct: 142  RVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKG 201

Query: 704  FQVLKDMEKRGCNKTLQTYNSLMLGLRSKNQIFEMCGLMDEMREYGISPNVFSYNTIISC 525
             ++L  M   G       YN+L+     + +  +   L+D+MRE G+ P+V ++N+ IS 
Sbjct: 202  LELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISA 261

Query: 524  LCEAGRTEEATSLLEEML---EKGI-IPNAHSFKLLIEALCRSGEFRPAMDVFDIGLSIC 357
            LC +G+  EA+ +  +M    E G+  PN  ++KL++   C+ G    A  + D   ++ 
Sbjct: 262  LCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVD---TMK 318

Query: 356  GQIKTLYVVMFNEMLAGGEILVAKKLLEA--AIERCFGLGSFP----CKDLIDRLSEDDR 195
                 + +  +N  L G  ++   KLLEA   ++   G+G  P       ++D L ++  
Sbjct: 319  RNANFINLESYNIWLLG--LIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGM 376

Query: 194  LEEAFDILKKMVYNGYGFDPASFMPVIDALTRRGRKQEADELVERMLNKAAVDKVY 27
            L +A  ++  M+ NG   D  ++  ++     +G+  EA+ L+  M++       Y
Sbjct: 377  LSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTY 432



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 62/256 (24%), Positives = 110/256 (42%), Gaps = 8/256 (3%)
 Frame = -2

Query: 770 PDSVVYNTFLHNLCKRGKVSMAFQVLKDMEKRGCNKTLQTYNSLMLGLRSKNQIFEMCGL 591
           P   +YN  L +  +  +V +   + KDM     +    T+N L+  L     + +   L
Sbjct: 110 PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDAREL 169

Query: 590 MDEMREYGISPNVFSYNTIISCLCEAGRTEEATSLLEEMLEKGIIPNAHSFKLLIEALCR 411
            D+M   G  PN F++  ++   C AG   +   LL +M   GI+PN   +  LI + C+
Sbjct: 170 FDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCK 229

Query: 410 SGEFRPAMDVFDIGLSICGQIKTLYVVMFNEMLA----GGEILVAKKLL-EAAIERCFGL 246
            G+   A  + D  +   G +   +V  FN  ++     G+IL A ++  +  I+   GL
Sbjct: 230 EGKTHDAEKLVD-KMREDGLVP--HVETFNSRISALCGSGKILEASRIFRDMQIDEELGL 286

Query: 245 ---GSFPCKDLIDRLSEDDRLEEAFDILKKMVYNGYGFDPASFMPVIDALTRRGRKQEAD 75
                   K ++    ++  LEEA  ++  M  N    +  S+   +  L R G+  EA 
Sbjct: 287 PHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAW 346

Query: 74  ELVERMLNKAAVDKVY 27
            +++ ML       +Y
Sbjct: 347 IVLKEMLGIGIEPDIY 362


>ref|XP_002328265.1| predicted protein [Populus trichocarpa] gi|222837780|gb|EEE76145.1|
            predicted protein [Populus trichocarpa]
          Length = 742

 Score =  476 bits (1224), Expect = e-132
 Identities = 225/376 (59%), Positives = 298/376 (79%)
 Frame = -2

Query: 1157 SPNDYTLNVLLHSLLKEGKISEAEKLLQKMNEGGHDLGIVSCNIVIDGLCRSGRVDRAVE 978
            SPN+YT N+LL+SL KEG+ISEAE+LLQKMNE G+ +  V+CNIVIDGLC +G++D+A+E
Sbjct: 337  SPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIE 396

Query: 977  ITGEFWSHGSAALGNLGNSFIGLVDEGNNGRKCSPDLITYSIVIHGLCNDGRLVEAKKIF 798
            I    W+HGSAALGNLGNS+IGLVD+ ++ +KC PDLI+YS +I GLC  GR+ EAKK F
Sbjct: 397  IVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKF 456

Query: 797  IEMMQKNLYPDSVVYNTFLHNLCKRGKVSMAFQVLKDMEKRGCNKTLQTYNSLMLGLRSK 618
            IEMM KNL PDS +Y+ F+H+ CK GK+S AF+VLKDMEK+GCNKTLQTYNSL++GL SK
Sbjct: 457  IEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSK 516

Query: 617  NQIFEMCGLMDEMREYGISPNVFSYNTIISCLCEAGRTEEATSLLEEMLEKGIIPNAHSF 438
            NQIFE+ GL+DEMRE G+SP+V  YN ++S LCE GR ++A S+L+EML+KGI PN  SF
Sbjct: 517  NQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSF 576

Query: 437  KLLIEALCRSGEFRPAMDVFDIGLSICGQIKTLYVVMFNEMLAGGEILVAKKLLEAAIER 258
             +LI+A C++ +F    ++F+I L++CG  + LY + FNE+L GGE++ AK+L E A++R
Sbjct: 577  SILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVKAKELFETALDR 636

Query: 257  CFGLGSFPCKDLIDRLSEDDRLEEAFDILKKMVYNGYGFDPASFMPVIDALTRRGRKQEA 78
             F +G+F  KDLID L +D++L++A  IL K++  GY FDPASFMPVID L +RG K EA
Sbjct: 637  SFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEA 696

Query: 77   DELVERMLNKAAVDKV 30
            DEL E+M+  A+  KV
Sbjct: 697  DELAEKMMEMASEGKV 712



 Score =  145 bits (367), Expect = 1e-32
 Identities = 111/430 (25%), Positives = 196/430 (45%), Gaps = 46/430 (10%)
 Frame = -2

Query: 1157 SPNDYTLNVLLHSLLKEGKISEAEKLLQKMNEGGHDLGIVSCNIVIDGLCRSGRVDRAVE 978
            SP  YT NVL+  L   G + +A +L  KM E G +    S  I++ G CR+G   + +E
Sbjct: 53   SPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLE 112

Query: 977  ITGEF----WSHGSAALGNLGNSFI---------GLVDEGNNGRKCSPDLITYSIVIHGL 837
            + GE     +S        L +SF           LVDE       SPD++T++  I  L
Sbjct: 113  LLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKD-GLSPDVVTFNARISAL 171

Query: 836  CNDGRLVEAKKIFIEMMQKNL----YPDSVVYNTFLHNLCKRGKVSMAFQVLKDMEKRGC 669
            C+ G+++EA +IF +M    +     P+ + YN  L   CK G +  A  + + M+    
Sbjct: 172  CSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSEN 231

Query: 668  NKTLQTYNSLMLGLRSKNQIFEMCGLMDEMREYGISPNVFSYNTIISCLCEAGRTEEATS 489
                ++YN  +LGL    ++ E   ++ EM + G+ PNV+SYN ++  LC+ G   +A  
Sbjct: 232  LMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARM 291

Query: 488  LLEEMLEKGIIPNAHSFKLLIEALCRSGEFRPAMDVF-DIGLSICGQIKTLYVVMFNEML 312
            L+  M   G++P+  ++  L+   C +G+   A +V  ++    C        ++   + 
Sbjct: 292  LMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLW 351

Query: 311  AGGEILVAKKLLEAAIERCFGLGSFPCKDLIDRLSEDDRLEEAFDILKKMVYNGYGF--- 141
              G I  A++LL+   E+ + + +  C  +ID L  + +L++A +I+  M  +G      
Sbjct: 352  KEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGN 411

Query: 140  --------------------DPASFMPVIDALTRRGRKQEADELVERMLNK-----AAVD 36
                                D  S+  +I  L + GR  EA +    M+ K     +A+ 
Sbjct: 412  LGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIY 471

Query: 35   KVYINGVYRQ 6
             V+I+   ++
Sbjct: 472  DVFIHSFCKE 481



 Score =  130 bits (328), Expect = 5e-28
 Identities = 99/406 (24%), Positives = 176/406 (43%), Gaps = 40/406 (9%)
 Frame = -2

Query: 1154 PNDYTLNVLLHSLLKEGKISEAEKLLQKMNEGGHDLGIVSCNIVIDGLCRSGRVDRAVEI 975
            P+ Y  NVLL S  KEG++     L + M   G      + N++I  LC SG +D A E+
Sbjct: 19   PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 974  TGEFWSHGSAALGNLGNSFIGLVDEGNNGRKCSPDLITYSIVIHGLCNDGRLVEAKKIFI 795
              +    G                       C P+  ++ I++ G C  G   +  ++  
Sbjct: 79   FDKMPEKG-----------------------CEPNEYSFGILVRGYCRAGFTSKGLELLG 115

Query: 794  EMMQKNLYPDSVVYNTFLHNLCKRGKVSMAFQVLKDMEKRGCNKTLQTYNSLMLGLRSKN 615
            EM +    P+ VVYNT + + CK GK   A +++ +M K G +  + T+N+ +  L S  
Sbjct: 116  EMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSG 175

Query: 614  QIFEMCGLMDEMREYGI----SPNVFSYNTIISCLCEAGRTEEATSL------------- 486
            ++ E   +  +M+   +     PN+ +YN ++   C+ G  EEA +L             
Sbjct: 176  KVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNR 235

Query: 485  ----------------------LEEMLEKGIIPNAHSFKLLIEALCRSGEFRPAMDVFDI 372
                                  L+EM++ G+ PN +S+ ++++ LC++G    A  +  +
Sbjct: 236  ESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRL 295

Query: 371  GLSICGQIKTL-YVVMFNEMLAGGEILVAKKLLEAAIERCFGLGSFPCKDLIDRLSEDDR 195
              S      T+ Y  + +     G++  A  +L   +       ++ C  L+  L ++ R
Sbjct: 296  MTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGR 355

Query: 194  LEEAFDILKKMVYNGYGFDPASFMPVIDALTRRGRKQEADELVERM 57
            + EA ++L+KM   GY  D  +   VID L   G+  +A E+V  M
Sbjct: 356  ISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGM 401



 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 68/260 (26%), Positives = 112/260 (43%), Gaps = 12/260 (4%)
 Frame = -2

Query: 770 PDSVVYNTFLHNLCKRGKVSMAFQVLKDMEKRGCNKTLQTYNSLMLGLRSKNQIFEMCGL 591
           P   +YN  L +  K G+V     + KDM   G +    T+N L+  L     + +   L
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 590 MDEMREYGISPNVFSYNTIISCLCEAGRTEEATSLLEEMLEKGIIPNAHSFKLLIEALCR 411
            D+M E G  PN +S+  ++   C AG T +   LL EM   G  PN   +  LI + C+
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 410 SGEFRPAMDVFD----IGLSICGQIKTLYVVMFN----EMLAGGEILVAKKLL-EAAIER 258
            G+   A  + D     GLS         VV FN     + + G++L A ++  +  I+ 
Sbjct: 139 EGKTDDAEKLVDEMRKDGLS-------PDVVTFNARISALCSSGKVLEASRIFRDMQIDE 191

Query: 257 CFGL---GSFPCKDLIDRLSEDDRLEEAFDILKKMVYNGYGFDPASFMPVIDALTRRGRK 87
             GL          ++    ++  LEEA  + +KM  +    +  S+   +  L R G+ 
Sbjct: 192 VLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKL 251

Query: 86  QEADELVERMLNKAAVDKVY 27
            EA  +++ M++      VY
Sbjct: 252 LEAQLVLKEMVDMGMEPNVY 271


>ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g17140 gi|110737729|dbj|BAF00803.1| hypothetical
            protein [Arabidopsis thaliana]
            gi|330251496|gb|AEC06590.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  442 bits (1136), Expect = e-121
 Identities = 217/375 (57%), Positives = 282/375 (75%)
 Frame = -2

Query: 1154 PNDYTLNVLLHSLLKEGKISEAEKLLQKMNEGGHDLGIVSCNIVIDGLCRSGRVDRAVEI 975
            PN YT N+LLHSL K G+ISEAE+LL+KMNE G+ L  V+CNI++DGLC SG +D+A+EI
Sbjct: 429  PNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEI 488

Query: 974  TGEFWSHGSAALGNLGNSFIGLVDEGNNGRKCSPDLITYSIVIHGLCNDGRLVEAKKIFI 795
                  HGSAALGNLGNS+IGLVD+      C PDLITYS +++GLC  GR  EAK +F 
Sbjct: 489  VKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFA 548

Query: 794  EMMQKNLYPDSVVYNTFLHNLCKRGKVSMAFQVLKDMEKRGCNKTLQTYNSLMLGLRSKN 615
            EMM + L PDSV YN F+H+ CK+GK+S AF+VLKDMEK+GC+K+L+TYNSL+LGL  KN
Sbjct: 549  EMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKN 608

Query: 614  QIFEMCGLMDEMREYGISPNVFSYNTIISCLCEAGRTEEATSLLEEMLEKGIIPNAHSFK 435
            QIFE+ GLMDEM+E GISPN+ +YNT I  LCE  + E+AT+LL+EM++K I PN  SFK
Sbjct: 609  QIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFK 668

Query: 434  LLIEALCRSGEFRPAMDVFDIGLSICGQIKTLYVVMFNEMLAGGEILVAKKLLEAAIERC 255
             LIEA C+  +F  A +VF+  +SICGQ + LY +MFNE+LA G++L A +LLEA ++R 
Sbjct: 669  YLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRG 728

Query: 254  FGLGSFPCKDLIDRLSEDDRLEEAFDILKKMVYNGYGFDPASFMPVIDALTRRGRKQEAD 75
            F LG+F  KDL++ L + D LE A  IL KM+  GYGFDPA+ MPVID L + G K+EA+
Sbjct: 729  FELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEAN 788

Query: 74   ELVERMLNKAAVDKV 30
               ++M+  A+V +V
Sbjct: 789  SFADKMMEMASVGEV 803



 Score =  127 bits (318), Expect = 7e-27
 Identities = 87/335 (25%), Positives = 152/335 (45%)
 Frame = -2

Query: 1154 PNDYTLNVLLHSLLKEGKISEAEKLLQKMNEGGHDLGIVSCNIVIDGLCRSGRVDRAVEI 975
            PN    N ++ S  +EG+  ++EK+++KM E G    IV+ N  I  LC+ G+V  A  I
Sbjct: 215  PNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRI 274

Query: 974  TGEFWSHGSAALGNLGNSFIGLVDEGNNGRKCSPDLITYSIVIHGLCNDGRLVEAKKIFI 795
              +             + ++GL           P+ ITY++++ G C  G L +AK +F 
Sbjct: 275  FSDMEL----------DEYLGLP---------RPNSITYNLMLKGFCKVGLLEDAKTLFE 315

Query: 794  EMMQKNLYPDSVVYNTFLHNLCKRGKVSMAFQVLKDMEKRGCNKTLQTYNSLMLGLRSKN 615
             + + +       YN +L  L + GK   A  VLK M  +G   ++ +YN LM GL    
Sbjct: 316  SIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLG 375

Query: 614  QIFEMCGLMDEMREYGISPNVFSYNTIISCLCEAGRTEEATSLLEEMLEKGIIPNAHSFK 435
             + +   ++  M+  G+ P+  +Y  ++   C  G+ + A SLL+EM+    +PNA++  
Sbjct: 376  MLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCN 435

Query: 434  LLIEALCRSGEFRPAMDVFDIGLSICGQIKTLYVVMFNEMLAGGEILVAKKLLEAAIERC 255
            +L+ +L +                                   G I  A++LL    E+ 
Sbjct: 436  ILLHSLWKM----------------------------------GRISEAEELLRKMNEKG 461

Query: 254  FGLGSFPCKDLIDRLSEDDRLEEAFDILKKMVYNG 150
            +GL +  C  ++D L     L++A +I+K M  +G
Sbjct: 462  YGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496



 Score =  121 bits (304), Expect = 3e-25
 Identities = 98/409 (23%), Positives = 178/409 (43%), Gaps = 43/409 (10%)
 Frame = -2

Query: 1154 PNDYTLNVLLHSLLKEGKISEAEKLLQKMNEGGHDLGIVSCNIVIDGLCRSGRVDRAVEI 975
            P+ Y  N+LL S +KE ++     L + M   G      + N++I  LC S  VD A E+
Sbjct: 110  PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169

Query: 974  TGEFWSHGSAALGNLGNSFIGLVDEGNNGRKCSPDLITYSIVIHGLCNDGRLVEAKKIFI 795
              E    G                       C P+  T+ I++ G C  G   +  ++  
Sbjct: 170  FDEMPEKG-----------------------CKPNEFTFGILVRGYCKAGLTDKGLELLN 206

Query: 794  EMMQKNLYPDSVVYNTFLHNLCKRGKVSMAFQVLKDMEKRGCNKTLQTYNSLMLGLRSKN 615
             M    + P+ V+YNT + + C+ G+   + ++++ M + G    + T+NS +  L  + 
Sbjct: 207  AMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEG 266

Query: 614  QIFEMCGLMDEMR--EY-GI-SPNVFSYNTIISCLCEAGRTE------------------ 501
            ++ +   +  +M   EY G+  PN  +YN ++   C+ G  E                  
Sbjct: 267  KVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASL 326

Query: 500  -----------------EATSLLEEMLEKGIIPNAHSFKLLIEALCRSGEFRPAMDVFDI 372
                             EA ++L++M +KGI P+ +S+ +L++ LC+ G    A  +  +
Sbjct: 327  QSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI--V 384

Query: 371  GL----SICGQIKTLYVVMFNEMLAGGEILVAKKLLEAAIERCFGLGSFPCKDLIDRLSE 204
            GL     +C    T Y  + +   + G++  AK LL+  +       ++ C  L+  L +
Sbjct: 385  GLMKRNGVCPDAVT-YGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK 443

Query: 203  DDRLEEAFDILKKMVYNGYGFDPASFMPVIDALTRRGRKQEADELVERM 57
              R+ EA ++L+KM   GYG D  +   ++D L   G   +A E+V+ M
Sbjct: 444  MGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492



 Score =  110 bits (276), Expect = 5e-22
 Identities = 90/400 (22%), Positives = 168/400 (42%), Gaps = 24/400 (6%)
 Frame = -2

Query: 1154 PNDYTLNVLLHSLLKEGKISEAEKLLQKMNEGGHDLGIVSCNIVIDGLCRSGRVDRAVEI 975
            PN  T N++L    K G + +A+ L + + E      + S NI + GL R G+   A  +
Sbjct: 289  PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348

Query: 974  TGEFWSHGSAALGNLGNSFIGLVDEGNNGRKCSPDLITYSIVIHGLCNDGRLVEAKKIFI 795
              +                  + D+G       P + +Y+I++ GLC  G L +AK I  
Sbjct: 349  LKQ------------------MTDKG-----IGPSIYSYNILMDGLCKLGMLSDAKTIVG 385

Query: 794  EMMQKNLYPDSVVYNTFLHNLCKRGKVSMAFQVLKDMEKRGCNKTLQTYNSLMLGLRSKN 615
             M +  + PD+V Y   LH  C  GKV  A  +L++M +  C     T N L+  L    
Sbjct: 386  LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMG 445

Query: 614  QIFEMCGLMDEMREYGISPNVFSYNTIISCLCEAGRTEEATSLL---------------- 483
            +I E   L+ +M E G   +  + N I+  LC +G  ++A  ++                
Sbjct: 446  RISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGN 505

Query: 482  -------EEMLEKGIIPNAHSFKLLIEALCRSGEFRPAMDVFDIGLSICGQIKTL-YVVM 327
                   + ++E   +P+  ++  L+  LC++G F  A ++F   +    Q  ++ Y + 
Sbjct: 506  SYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIF 565

Query: 326  FNEMLAGGEILVAKKLLEAAIERCFGLGSFPCKDLIDRLSEDDRLEEAFDILKKMVYNGY 147
             +     G+I  A ++L+   ++           LI  L   +++ E   ++ +M   G 
Sbjct: 566  IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGI 625

Query: 146  GFDPASFMPVIDALTRRGRKQEADELVERMLNKAAVDKVY 27
              +  ++   I  L    + ++A  L++ M+ K     V+
Sbjct: 626  SPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVF 665



 Score = 94.4 bits (233), Expect = 5e-17
 Identities = 62/290 (21%), Positives = 139/290 (47%), Gaps = 6/290 (2%)
 Frame = -2

Query: 878  SPDLITYSIVIHGLCNDGRLVEAKKIFIEMMQKNLYPDSVVYNTFLHNLCKRGKVSMAFQ 699
            +P   T++++I  LC+   +  A+++F EM +K   P+   +   +   CK G      +
Sbjct: 144  APQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE 203

Query: 698  VLKDMEKRGCNKTLQTYNSLMLGLRSKNQIFEMCGLMDEMREYGISPNVFSYNTIISCLC 519
            +L  ME  G       YN+++     + +  +   ++++MRE G+ P++ ++N+ IS LC
Sbjct: 204  LLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263

Query: 518  EAGRTEEATSLLEEM-LEKGI---IPNAHSFKLLIEALCRSGEFRPAMDVFDIGLSICGQ 351
            + G+  +A+ +  +M L++ +    PN+ ++ L+++  C+ G    A  +F+  +     
Sbjct: 264  KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFE-SIRENDD 322

Query: 350  IKTL--YVVMFNEMLAGGEILVAKKLLEAAIERCFGLGSFPCKDLIDRLSEDDRLEEAFD 177
            + +L  Y +    ++  G+ + A+ +L+   ++  G   +    L+D L +   L +A  
Sbjct: 323  LASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKT 382

Query: 176  ILKKMVYNGYGFDPASFMPVIDALTRRGRKQEADELVERMLNKAAVDKVY 27
            I+  M  NG   D  ++  ++      G+   A  L++ M+    +   Y
Sbjct: 383  IVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAY 432


>ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 874

 Score =  439 bits (1129), Expect = e-121
 Identities = 217/375 (57%), Positives = 280/375 (74%)
 Frame = -2

Query: 1154 PNDYTLNVLLHSLLKEGKISEAEKLLQKMNEGGHDLGIVSCNIVIDGLCRSGRVDRAVEI 975
            PN YT N+LLHSL   G+ISEAE+LL+KMNE G+ L  V+CNI++DGLC SG +D+A+EI
Sbjct: 429  PNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEI 488

Query: 974  TGEFWSHGSAALGNLGNSFIGLVDEGNNGRKCSPDLITYSIVIHGLCNDGRLVEAKKIFI 795
                  HGSAALGNLGNS+IGLVD+      C PDLITYS +++GLC  GR  EAK +F 
Sbjct: 489  VKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFA 548

Query: 794  EMMQKNLYPDSVVYNTFLHNLCKRGKVSMAFQVLKDMEKRGCNKTLQTYNSLMLGLRSKN 615
            EMM + L PDS+ YN F+H+ CK+GK+S AF+VLKDMEK+GC+K+L+TYNSL+LGL  KN
Sbjct: 549  EMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKN 608

Query: 614  QIFEMCGLMDEMREYGISPNVFSYNTIISCLCEAGRTEEATSLLEEMLEKGIIPNAHSFK 435
            QIFE+ GLMDEMRE GISPN+ +YNT I  LCE G+ E+AT+LL+EM++K I PN  SFK
Sbjct: 609  QIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFK 668

Query: 434  LLIEALCRSGEFRPAMDVFDIGLSICGQIKTLYVVMFNEMLAGGEILVAKKLLEAAIERC 255
             LI A C+  +F  A +VF+  +SICGQ + LY +MFNE+LA G++L A +LLEA ++R 
Sbjct: 669  YLIGAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRG 728

Query: 254  FGLGSFPCKDLIDRLSEDDRLEEAFDILKKMVYNGYGFDPASFMPVIDALTRRGRKQEAD 75
            F LG+F  KDL+  L + D LE A  IL KM+  GYGFDPA+ MPVID L + G K+EA+
Sbjct: 729  FELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEAN 788

Query: 74   ELVERMLNKAAVDKV 30
               E+M+  A+V +V
Sbjct: 789  NFAEKMMEMASVGEV 803



 Score =  128 bits (321), Expect = 3e-27
 Identities = 89/335 (26%), Positives = 152/335 (45%)
 Frame = -2

Query: 1154 PNDYTLNVLLHSLLKEGKISEAEKLLQKMNEGGHDLGIVSCNIVIDGLCRSGRVDRAVEI 975
            PN    N ++ S  +EG+  ++EKL++KM E G    IV+ N  I  LC+ G+V  A  I
Sbjct: 215  PNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRI 274

Query: 974  TGEFWSHGSAALGNLGNSFIGLVDEGNNGRKCSPDLITYSIVIHGLCNDGRLVEAKKIFI 795
              +             + ++GL           P+ ITY++++ G C  G L +AK +F 
Sbjct: 275  FSDMEL----------DEYLGLP---------RPNSITYNLMLKGFCKVGLLEDAKTLFE 315

Query: 794  EMMQKNLYPDSVVYNTFLHNLCKRGKVSMAFQVLKDMEKRGCNKTLQTYNSLMLGLRSKN 615
             + + +       YN +L  L + GK   A  VLK M  +G   ++ +YN LM GL    
Sbjct: 316  SIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLG 375

Query: 614  QIFEMCGLMDEMREYGISPNVFSYNTIISCLCEAGRTEEATSLLEEMLEKGIIPNAHSFK 435
             + +   ++  M+  G+SP+  +Y  ++   C  G+ + A SLL+EM+    +PNA++  
Sbjct: 376  MLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCN 435

Query: 434  LLIEALCRSGEFRPAMDVFDIGLSICGQIKTLYVVMFNEMLAGGEILVAKKLLEAAIERC 255
            +L+ +L                                     G I  A++LL    E+ 
Sbjct: 436  ILLHSLWNM----------------------------------GRISEAEELLRKMNEKG 461

Query: 254  FGLGSFPCKDLIDRLSEDDRLEEAFDILKKMVYNG 150
            +GL +  C  ++D L     L++A +I+K M  +G
Sbjct: 462  YGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496



 Score =  121 bits (303), Expect = 4e-25
 Identities = 97/408 (23%), Positives = 175/408 (42%), Gaps = 42/408 (10%)
 Frame = -2

Query: 1154 PNDYTLNVLLHSLLKEGKISEAEKLLQKMNEGGHDLGIVSCNIVIDGLCRSGRVDRAVEI 975
            P  Y  NVLL S ++E ++     L + M   G      + N++I  LC S  VD A E+
Sbjct: 110  PGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAAREL 169

Query: 974  TGEFWSHGSAALGNLGNSFIGLVDEGNNGRKCSPDLITYSIVIHGLCNDGRLVEAKKIFI 795
              E    G                       C P+  T+ I++ G C  G   +  ++  
Sbjct: 170  FDEMPEKG-----------------------CKPNEFTFGILVRGYCKAGLTDKGLELLN 206

Query: 794  EMMQKNLYPDSVVYNTFLHNLCKRGKVSMAFQVLKDMEKRGCNKTLQTYNSLMLGLRSKN 615
             M    + P+ VVYNT + + C+ G+   + ++++ M + G    + T+NS +  L  + 
Sbjct: 207  SMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEG 266

Query: 614  QIFEMCGLMDEMR--EY-GI-SPNVFSYNTIISCLCEAGRTE------------------ 501
            ++ +   +  +M   EY G+  PN  +YN ++   C+ G  E                  
Sbjct: 267  KVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSL 326

Query: 500  -----------------EATSLLEEMLEKGIIPNAHSFKLLIEALCRSGEFRPAMDVFDI 372
                             EA ++L++M++KGI P+ +S+ +L++ LC+ G    A  +  +
Sbjct: 327  QSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTI--V 384

Query: 371  GLSICGQIK---TLYVVMFNEMLAGGEILVAKKLLEAAIERCFGLGSFPCKDLIDRLSED 201
            GL     +      Y  + +   + G++  AK LL+  +       ++ C  L+  L   
Sbjct: 385  GLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNM 444

Query: 200  DRLEEAFDILKKMVYNGYGFDPASFMPVIDALTRRGRKQEADELVERM 57
             R+ EA ++L+KM   GYG D  +   ++D L   G   +A E+V+ M
Sbjct: 445  GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492



 Score =  116 bits (290), Expect = 1e-23
 Identities = 92/400 (23%), Positives = 171/400 (42%), Gaps = 24/400 (6%)
 Frame = -2

Query: 1154 PNDYTLNVLLHSLLKEGKISEAEKLLQKMNEGGHDLGIVSCNIVIDGLCRSGRVDRAVEI 975
            PN  T N++L    K G + +A+ L + + E    + + S NI + GL R G+   A  +
Sbjct: 289  PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETV 348

Query: 974  TGEFWSHGSAALGNLGNSFIGLVDEGNNGRKCSPDLITYSIVIHGLCNDGRLVEAKKIFI 795
              +                  ++D+G       P + +Y+I++ GLC  G L +AK I  
Sbjct: 349  LKQ------------------MIDKG-----IGPSIYSYNILMDGLCKLGMLSDAKTIVG 385

Query: 794  EMMQKNLYPDSVVYNTFLHNLCKRGKVSMAFQVLKDMEKRGCNKTLQTYNSLMLGLRSKN 615
             M +  + PD+V Y   LH  C  GKV  A  +L++M +  C     T N L+  L +  
Sbjct: 386  LMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMG 445

Query: 614  QIFEMCGLMDEMREYGISPNVFSYNTIISCLCEAGRTEEATSLL---------------- 483
            +I E   L+ +M E G   +  + N I+  LC +G  ++A  ++                
Sbjct: 446  RISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGN 505

Query: 482  -------EEMLEKGIIPNAHSFKLLIEALCRSGEFRPAMDVFDIGLSICGQIKTL-YVVM 327
                   + ++E   +P+  ++  L+  LC++G F  A  +F   +    Q  +L Y + 
Sbjct: 506  SYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIF 565

Query: 326  FNEMLAGGEILVAKKLLEAAIERCFGLGSFPCKDLIDRLSEDDRLEEAFDILKKMVYNGY 147
             +     G+I  A ++L+   ++           LI  L   +++ E   ++ +M   G 
Sbjct: 566  IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGI 625

Query: 146  GFDPASFMPVIDALTRRGRKQEADELVERMLNKAAVDKVY 27
              +  ++   I  L   G+ ++A  L++ M+ K     V+
Sbjct: 626  SPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVF 665



 Score =  101 bits (252), Expect = 3e-19
 Identities = 68/292 (23%), Positives = 141/292 (48%), Gaps = 8/292 (2%)
 Frame = -2

Query: 878  SPDLITYSIVIHGLCNDGRLVEAKKIFIEMMQKNLYPDSVVYNTFLHNLCKRGKVSMAFQ 699
            SP+  T++++I  LC+   +  A+++F EM +K   P+   +   +   CK G      +
Sbjct: 144  SPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE 203

Query: 698  VLKDMEKRGCNKTLQTYNSLMLGLRSKNQIFEMCGLMDEMREYGISPNVFSYNTIISCLC 519
            +L  ME  G       YN+++     + +  +   L+++MRE G+ P++ ++N+ IS LC
Sbjct: 204  LLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALC 263

Query: 518  EAGRTEEATSLLEEM-LEKGI---IPNAHSFKLLIEALCRSGEFRPAMDVFDIGLSICGQ 351
            + G+  +A+ +  +M L++ +    PN+ ++ L+++  C+ G    A  +F+   SI   
Sbjct: 264  KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFE---SIREN 320

Query: 350  IKTLYVVMFNEMLAG----GEILVAKKLLEAAIERCFGLGSFPCKDLIDRLSEDDRLEEA 183
               + +  +N  L G    G+ + A+ +L+  I++  G   +    L+D L +   L +A
Sbjct: 321  DDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDA 380

Query: 182  FDILKKMVYNGYGFDPASFMPVIDALTRRGRKQEADELVERMLNKAAVDKVY 27
              I+  M  NG   D  ++  ++      G+   A  L++ M+    +   Y
Sbjct: 381  KTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAY 432