BLASTX nr result

ID: Cephaelis21_contig00006080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006080
         (1185 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [...   529   e-148
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   520   e-145
emb|CBI17233.3| unnamed protein product [Vitis vinifera]              520   e-145
ref|XP_004168014.1| PREDICTED: ribosome biogenesis protein BMS1 ...   513   e-143
ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 ...   513   e-143

>ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
            gi|223543572|gb|EEF45102.1| ribosome biogenesis protein
            bms1, putative [Ricinus communis]
          Length = 825

 Score =  529 bits (1363), Expect = e-148
 Identities = 272/383 (71%), Positives = 294/383 (76%)
 Frame = -2

Query: 1154 MAVDGGTQQQSHKTHRSRQAGPXXXXXXXXXXXSRLPPXXXXXXXXXXDKQHKRQHNPKA 975
            M +D G+++QSHK HRSRQAGP            +             +   +++ NPKA
Sbjct: 1    MGMDSGSKEQSHKVHRSRQAGP------------KKQAKSDKKKKTDDNSTEEKKQNPKA 48

Query: 974  FAFNSTVKAKRLQARATEKEQKRLHVPVMDRSAGEPAPFXXXXXXXXXXGKSLVIKSLVK 795
            FAFNS+VKAKRLQ+RA EKEQ+RLHVP +DRS GEPAP+          GKSL+IKSLVK
Sbjct: 49   FAFNSSVKAKRLQSRAVEKEQRRLHVPTIDRSYGEPAPYVVLVHGPPQVGKSLLIKSLVK 108

Query: 794  HYTKHNLPEVRGPTTIVSGKQRRLQFVECPNDINGMXXXXXXXXXXXXLVDGSYGFEMET 615
            HYTKHNLPEVRGP TIVSGKQRR+QFVECPNDINGM            L+DGSYGFEMET
Sbjct: 109  HYTKHNLPEVRGPITIVSGKQRRVQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMET 168

Query: 614  FEFLNILQNHGFPKVMGVLTXXXXXXXXXXXXXXXXXXXXXFWTEIYDGAKLFYLSGLIH 435
            FEFLNILQ HGFPKVMGVLT                     FWTEIYDGAKLFYLSGLIH
Sbjct: 169  FEFLNILQVHGFPKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIH 228

Query: 434  GKYSKREIHNLARFISVMKFPPLSWRLSHPYILVDRFEDVTAPEKVQMDNKCDRNVTLYG 255
            GKY +REIHNLARFISVMKF PLSWR SHPY+LVDRFEDVT PE+V M+ K DRNVTLYG
Sbjct: 229  GKYPRREIHNLARFISVMKFHPLSWRTSHPYVLVDRFEDVTPPEQVHMNRKSDRNVTLYG 288

Query: 254  YLRGCNLKKGTKVHIAGVGDGSLAGVTALADPCPLPSAAKKKGLRDKEKLFYAPMSGLGD 75
            YLRGCNLKKGTKVHIAGVGD SLAGVTALADPCPLPSAAKKKGLRDKEKLFYAPMSG+GD
Sbjct: 289  YLRGCNLKKGTKVHIAGVGDYSLAGVTALADPCPLPSAAKKKGLRDKEKLFYAPMSGVGD 348

Query: 74   LLYDKDAVYININDHFVQFSKDD 6
            LLYDKDAVYININDHFVQFSK D
Sbjct: 349  LLYDKDAVYININDHFVQFSKVD 371


>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis vinifera]
          Length = 1139

 Score =  520 bits (1339), Expect = e-145
 Identities = 267/381 (70%), Positives = 289/381 (75%)
 Frame = -2

Query: 1148 VDGGTQQQSHKTHRSRQAGPXXXXXXXXXXXSRLPPXXXXXXXXXXDKQHKRQHNPKAFA 969
            V G    Q H++HRSRQ+GP            R             D   +++HNPKAFA
Sbjct: 4    VSGTGDVQPHRSHRSRQSGPSAKKKSKSDKRKR-------------DISDEKKHNPKAFA 50

Query: 968  FNSTVKAKRLQARATEKEQKRLHVPVMDRSAGEPAPFXXXXXXXXXXGKSLVIKSLVKHY 789
            F+S+VKAKRLQ+RATEKEQ+RLH+P +DRS GEPAP+          GKSL+IKSLVKHY
Sbjct: 51   FSSSVKAKRLQSRATEKEQRRLHIPTIDRSTGEPAPYVVVVHGPPQVGKSLLIKSLVKHY 110

Query: 788  TKHNLPEVRGPTTIVSGKQRRLQFVECPNDINGMXXXXXXXXXXXXLVDGSYGFEMETFE 609
            TKHNL EVRGP TIVSGK RRLQFVECPNDINGM            L+DGSYGFEMETFE
Sbjct: 111  TKHNLSEVRGPITIVSGKNRRLQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFE 170

Query: 608  FLNILQNHGFPKVMGVLTXXXXXXXXXXXXXXXXXXXXXFWTEIYDGAKLFYLSGLIHGK 429
            FLNILQ HGFPKVMGVLT                     FWTEIYDGAKLFYLSGL+HGK
Sbjct: 171  FLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLVHGK 230

Query: 428  YSKREIHNLARFISVMKFPPLSWRLSHPYILVDRFEDVTAPEKVQMDNKCDRNVTLYGYL 249
            Y KREIHNLARFISVMKF PLSWR SHPYILVDRFEDVT PE+VQ++NKCDRN+TLYGYL
Sbjct: 231  YPKREIHNLARFISVMKFHPLSWRASHPYILVDRFEDVTPPERVQLNNKCDRNITLYGYL 290

Query: 248  RGCNLKKGTKVHIAGVGDGSLAGVTALADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLL 69
            RGCNLKKGTKVHIAGVGD SLAGVT LADPCPLPSAAKKKGLRD++KLFYAPMSGLGDLL
Sbjct: 291  RGCNLKKGTKVHIAGVGDHSLAGVTGLADPCPLPSAAKKKGLRDRDKLFYAPMSGLGDLL 350

Query: 68   YDKDAVYININDHFVQFSKDD 6
            YDKDAVYININDH VQFS  D
Sbjct: 351  YDKDAVYININDHLVQFSNVD 371


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score =  520 bits (1339), Expect = e-145
 Identities = 267/381 (70%), Positives = 289/381 (75%)
 Frame = -2

Query: 1148 VDGGTQQQSHKTHRSRQAGPXXXXXXXXXXXSRLPPXXXXXXXXXXDKQHKRQHNPKAFA 969
            V G    Q H++HRSRQ+GP            R             D   +++HNPKAFA
Sbjct: 4    VSGTGDVQPHRSHRSRQSGPSAKKKSKSDKRKR-------------DISDEKKHNPKAFA 50

Query: 968  FNSTVKAKRLQARATEKEQKRLHVPVMDRSAGEPAPFXXXXXXXXXXGKSLVIKSLVKHY 789
            F+S+VKAKRLQ+RATEKEQ+RLH+P +DRS GEPAP+          GKSL+IKSLVKHY
Sbjct: 51   FSSSVKAKRLQSRATEKEQRRLHIPTIDRSTGEPAPYVVVVHGPPQVGKSLLIKSLVKHY 110

Query: 788  TKHNLPEVRGPTTIVSGKQRRLQFVECPNDINGMXXXXXXXXXXXXLVDGSYGFEMETFE 609
            TKHNL EVRGP TIVSGK RRLQFVECPNDINGM            L+DGSYGFEMETFE
Sbjct: 111  TKHNLSEVRGPITIVSGKNRRLQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFE 170

Query: 608  FLNILQNHGFPKVMGVLTXXXXXXXXXXXXXXXXXXXXXFWTEIYDGAKLFYLSGLIHGK 429
            FLNILQ HGFPKVMGVLT                     FWTEIYDGAKLFYLSGL+HGK
Sbjct: 171  FLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLVHGK 230

Query: 428  YSKREIHNLARFISVMKFPPLSWRLSHPYILVDRFEDVTAPEKVQMDNKCDRNVTLYGYL 249
            Y KREIHNLARFISVMKF PLSWR SHPYILVDRFEDVT PE+VQ++NKCDRN+TLYGYL
Sbjct: 231  YPKREIHNLARFISVMKFHPLSWRASHPYILVDRFEDVTPPERVQLNNKCDRNITLYGYL 290

Query: 248  RGCNLKKGTKVHIAGVGDGSLAGVTALADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLL 69
            RGCNLKKGTKVHIAGVGD SLAGVT LADPCPLPSAAKKKGLRD++KLFYAPMSGLGDLL
Sbjct: 291  RGCNLKKGTKVHIAGVGDHSLAGVTGLADPCPLPSAAKKKGLRDRDKLFYAPMSGLGDLL 350

Query: 68   YDKDAVYININDHFVQFSKDD 6
            YDKDAVYININDH VQFS  D
Sbjct: 351  YDKDAVYININDHLVQFSNVD 371


>ref|XP_004168014.1| PREDICTED: ribosome biogenesis protein BMS1 homolog, partial [Cucumis
            sativus]
          Length = 532

 Score =  513 bits (1320), Expect = e-143
 Identities = 261/383 (68%), Positives = 286/383 (74%)
 Frame = -2

Query: 1154 MAVDGGTQQQSHKTHRSRQAGPXXXXXXXXXXXSRLPPXXXXXXXXXXDKQHKRQHNPKA 975
            MAV+   + QSHK HRSRQ+GP            +               ++ R+ NPKA
Sbjct: 1    MAVNASAEDQSHKAHRSRQSGPNAKKKSVNDKGKK-----------EEVSENDRKRNPKA 49

Query: 974  FAFNSTVKAKRLQARATEKEQKRLHVPVMDRSAGEPAPFXXXXXXXXXXGKSLVIKSLVK 795
            FAFNS+VKAKRLQAR+ EKEQ+RLHVPV+DR  GEPAP+          GKSL+IKSLVK
Sbjct: 50   FAFNSSVKAKRLQARSVEKEQRRLHVPVIDRCYGEPAPYVIVVQGPPQVGKSLLIKSLVK 109

Query: 794  HYTKHNLPEVRGPTTIVSGKQRRLQFVECPNDINGMXXXXXXXXXXXXLVDGSYGFEMET 615
            HYTKHNLP+VRGP TIVSGKQRRLQFVECPN+INGM            L+DG+YGFEMET
Sbjct: 110  HYTKHNLPDVRGPITIVSGKQRRLQFVECPNEINGMIDAAKFADLTLLLIDGAYGFEMET 169

Query: 614  FEFLNILQNHGFPKVMGVLTXXXXXXXXXXXXXXXXXXXXXFWTEIYDGAKLFYLSGLIH 435
            FEFLNIL NHG PKVMGVLT                     FWTEI  GAKLFYLSGL+H
Sbjct: 170  FEFLNILHNHGLPKVMGVLTHLDKFKDAKKLRKTKQRLKHRFWTEIRTGAKLFYLSGLVH 229

Query: 434  GKYSKREIHNLARFISVMKFPPLSWRLSHPYILVDRFEDVTAPEKVQMDNKCDRNVTLYG 255
            GKY KRE+HNLARFISVMKF PLSWR +HPY+LVDRFEDVT PE+V  +NKCDRN+TLYG
Sbjct: 230  GKYPKREVHNLARFISVMKFQPLSWRTNHPYVLVDRFEDVTPPERVHTNNKCDRNITLYG 289

Query: 254  YLRGCNLKKGTKVHIAGVGDGSLAGVTALADPCPLPSAAKKKGLRDKEKLFYAPMSGLGD 75
            YLRGCNLK GTKVHIAGVGD  LA VT LADPCPLPSAAKKKGLRDKEKLFYAPMSGLGD
Sbjct: 290  YLRGCNLKYGTKVHIAGVGDFELASVTNLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGD 349

Query: 74   LLYDKDAVYININDHFVQFSKDD 6
            LLYDKDAVYININDHFVQ+SK D
Sbjct: 350  LLYDKDAVYININDHFVQYSKVD 372


>ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cucumis sativus]
          Length = 1198

 Score =  513 bits (1320), Expect = e-143
 Identities = 261/383 (68%), Positives = 286/383 (74%)
 Frame = -2

Query: 1154 MAVDGGTQQQSHKTHRSRQAGPXXXXXXXXXXXSRLPPXXXXXXXXXXDKQHKRQHNPKA 975
            MAV+   + QSHK HRSRQ+GP            +               ++ R+ NPKA
Sbjct: 1    MAVNASAEDQSHKAHRSRQSGPNAKKKSVNDKGKK-----------EEVSENDRKRNPKA 49

Query: 974  FAFNSTVKAKRLQARATEKEQKRLHVPVMDRSAGEPAPFXXXXXXXXXXGKSLVIKSLVK 795
            FAFNS+VKAKRLQAR+ EKEQ+RLHVPV+DR  GEPAP+          GKSL+IKSLVK
Sbjct: 50   FAFNSSVKAKRLQARSVEKEQRRLHVPVIDRCYGEPAPYVIVVQGPPQVGKSLLIKSLVK 109

Query: 794  HYTKHNLPEVRGPTTIVSGKQRRLQFVECPNDINGMXXXXXXXXXXXXLVDGSYGFEMET 615
            HYTKHNLP+VRGP TIVSGKQRRLQFVECPN+INGM            L+DG+YGFEMET
Sbjct: 110  HYTKHNLPDVRGPITIVSGKQRRLQFVECPNEINGMIDAAKFADLTLLLIDGAYGFEMET 169

Query: 614  FEFLNILQNHGFPKVMGVLTXXXXXXXXXXXXXXXXXXXXXFWTEIYDGAKLFYLSGLIH 435
            FEFLNIL NHG PKVMGVLT                     FWTEI  GAKLFYLSGL+H
Sbjct: 170  FEFLNILHNHGLPKVMGVLTHLDKFKDAKKLRKTKQRLKHRFWTEIRTGAKLFYLSGLVH 229

Query: 434  GKYSKREIHNLARFISVMKFPPLSWRLSHPYILVDRFEDVTAPEKVQMDNKCDRNVTLYG 255
            GKY KRE+HNLARFISVMKF PLSWR +HPY+LVDRFEDVT PE+V  +NKCDRN+TLYG
Sbjct: 230  GKYPKREVHNLARFISVMKFQPLSWRTNHPYVLVDRFEDVTPPERVHTNNKCDRNITLYG 289

Query: 254  YLRGCNLKKGTKVHIAGVGDGSLAGVTALADPCPLPSAAKKKGLRDKEKLFYAPMSGLGD 75
            YLRGCNLK GTKVHIAGVGD  LA VT LADPCPLPSAAKKKGLRDKEKLFYAPMSGLGD
Sbjct: 290  YLRGCNLKYGTKVHIAGVGDFELASVTNLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGD 349

Query: 74   LLYDKDAVYININDHFVQFSKDD 6
            LLYDKDAVYININDHFVQ+SK D
Sbjct: 350  LLYDKDAVYININDHFVQYSKVD 372


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