BLASTX nr result
ID: Cephaelis21_contig00006022
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00006022
(800 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi... 86 6e-18
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ... 86 6e-18
gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japo... 86 6e-18
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 96 7e-18
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ... 88 2e-17
>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 86.3 bits (212), Expect(2) = 6e-18
Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 1/174 (0%)
Frame = -2
Query: 661 WIPDWPSPTLSNPLLGNQVSMTVDCLIDNNRCWRLPLLRCLFPVEVLQKISAIYLSKRSI 482
W+P + N++ + + + NRCW L+R + E ++ I L +
Sbjct: 826 WVPHGEHINVLEKKGRNRLIYVNELINEENRCWNETLVRHVLKEEDANEVLKIRLPNHQM 885
Query: 481 TGEDEQIWVKEKNGIYSVKSGFYLAQEVSNRSSPSTSLHLNAVHGCLEVSFWKKFWNLKL 302
+D W EK+G+++VKS + LA +S + +S A G E W + WN K+
Sbjct: 886 --DDFPAWHHEKSGLFTVKSAYKLAWNLSGKGVVQSSSS-TATSG--ERKIWSRVWNAKV 940
Query: 301 PSKVSFFIWK-ALNICPTADQLQKRGIIIPSLCPRCEEHGESISHALLECTQAK 143
+KV FIWK A + PT + ++R I + CP C GE+ HA +ECT+A+
Sbjct: 941 QAKVKIFIWKLAQDKLPTWENKRRRKIEMNGTCPVCGTKGENSYHATVECTKAR 994
Score = 30.8 bits (68), Expect(2) = 6e-18
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 755 WRGILWGKDLLKIGLVWKVKRG 690
W+GI G DLLK G +W+V G
Sbjct: 795 WKGIQHGLDLLKQGTIWRVGNG 816
>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 86.3 bits (212), Expect(2) = 6e-18
Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 1/174 (0%)
Frame = -2
Query: 661 WIPDWPSPTLSNPLLGNQVSMTVDCLIDNNRCWRLPLLRCLFPVEVLQKISAIYLSKRSI 482
W+P + N++ + + + NRCW L+R + E ++ I L +
Sbjct: 851 WVPHGEHINVLEKKGRNRLIYVNELINEENRCWNETLVRHVLKEEDANEVLKIRLPNHQM 910
Query: 481 TGEDEQIWVKEKNGIYSVKSGFYLAQEVSNRSSPSTSLHLNAVHGCLEVSFWKKFWNLKL 302
+D W EK+G+++VKS + LA +S + +S A G E W + WN K+
Sbjct: 911 --DDFPAWHHEKSGLFTVKSAYKLAWNLSGKGVVQSSSS-TATSG--ERKIWSRVWNAKV 965
Query: 301 PSKVSFFIWK-ALNICPTADQLQKRGIIIPSLCPRCEEHGESISHALLECTQAK 143
+KV FIWK A + PT + ++R I + CP C GE+ HA +ECT+A+
Sbjct: 966 QAKVKIFIWKLAQDKLPTWENKRRRKIEMNGTCPVCGTKGENSYHATVECTKAR 1019
Score = 30.8 bits (68), Expect(2) = 6e-18
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 755 WRGILWGKDLLKIGLVWKVKRG 690
W+GI G DLLK G +W+V G
Sbjct: 820 WKGIQHGLDLLKQGTIWRVGNG 841
>gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japonica Group]
Length = 1076
Score = 86.3 bits (212), Expect(2) = 6e-18
Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 1/174 (0%)
Frame = -2
Query: 661 WIPDWPSPTLSNPLLGNQVSMTVDCLIDNNRCWRLPLLRCLFPVEVLQKISAIYLSKRSI 482
W+P + N++ + + + NRCW L+R + E ++ I L +
Sbjct: 632 WVPHGEHINVLEKKGRNRLIYVNELINEENRCWNETLVRHVLKEEDANEVLKIRLPNHQM 691
Query: 481 TGEDEQIWVKEKNGIYSVKSGFYLAQEVSNRSSPSTSLHLNAVHGCLEVSFWKKFWNLKL 302
+D W EK+G+++VKS + LA +S + +S A G E W + WN K+
Sbjct: 692 --DDFPAWHHEKSGLFTVKSAYKLAWNLSGKGVVQSSSS-TATSG--ERKIWSRVWNAKV 746
Query: 301 PSKVSFFIWK-ALNICPTADQLQKRGIIIPSLCPRCEEHGESISHALLECTQAK 143
+KV FIWK A + PT + ++R I + CP C GE+ HA +ECT+A+
Sbjct: 747 QAKVKIFIWKLAQDKLPTWENKRRRKIEMNGTCPVCGTKGENSYHATVECTKAR 800
Score = 30.8 bits (68), Expect(2) = 6e-18
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 755 WRGILWGKDLLKIGLVWKVKRG 690
W+GI G DLLK G +W+V G
Sbjct: 601 WKGIQHGLDLLKQGTIWRVGNG 622
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 96.3 bits (238), Expect = 7e-18
Identities = 69/199 (34%), Positives = 99/199 (49%), Gaps = 9/199 (4%)
Frame = -2
Query: 670 TDNWIPDWPSPTLSNPLLGNQVSMTVDCLID-NNRCWRLPLLRCLFP---VEVLQKISAI 503
TD W+ D + N V + V LID +R W L +LR LFP VE++ K +
Sbjct: 935 TDKWLHDGSNRRPLNRRRFINVDLKVSQLIDPTSRNWNLNMLRDLFPWKDVEIILKQRPL 994
Query: 502 YLSKRSITGEDEQIWVKEKNGIYSVKSGF-YLAQEVSNRSSPSTSLHLNAVHGCLEVSFW 326
+ ED W+ NG+YSVK+G+ +L+++V +R L+ A S +
Sbjct: 995 FFK------EDSFCWLHSHNGLYSVKTGYEFLSKQVHHR------LYQEAKVKPSVNSLF 1042
Query: 325 KKFWNLKLPSKVSFFIWKALN-ICPTADQLQKRGIIIPSLCPRCEEHGESISHALLECTQ 149
K WNL K+ F+WKAL+ P D+L+ RGI C C+ E+I+H L EC
Sbjct: 1043 DKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGIRSDDGCLMCDTENETINHILFECPL 1102
Query: 148 AKIVW---RLSSLGLNFDS 101
A+ VW LSS G F +
Sbjct: 1103 ARQVWAITHLSSAGSEFSN 1121
>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 1382
Score = 87.8 bits (216), Expect(2) = 2e-17
Identities = 68/225 (30%), Positives = 100/225 (44%), Gaps = 8/225 (3%)
Frame = -2
Query: 676 LITDNWIPDWPSPTLSNPLLGNQVSMTVDCLIDNN-RCWRLPLLRCLFPVEVLQKISAIY 500
+ +DNWIP + P L L TV CL++ + RCW L+R LFPV++ ++I I
Sbjct: 949 IFSDNWIPGF-RPQLVTTLSPFPTDATVSCLMNEDARCWDGDLIRSLFPVDIAKEILQIP 1007
Query: 499 LSKRSITGEDEQIWVKEKNGIYSVKSGFYLAQEVSNRSSPSTSLHLNAVHGCLEVSFWKK 320
+S+ D W +K G+YSV+S + LA+ + + S S A WK
Sbjct: 1008 ISRHG--DADFASWPHDKLGLYSVRSAYNLARSEAFFADQSNSGRGMASRLLESQKDWKG 1065
Query: 319 FWNLKLPSKVSFFIWKALNIC-PTADQLQKRGIIIPSLCPRCEEHGESISHALLECTQAK 143
W + P K+ +W+A + C T QL++R I C C +++ H L C A
Sbjct: 1066 LWKINAPGKMKITLWRAAHECLATGFQLRRRHIPSTDGCVFC-NRDDTVEHVFLFCPFAA 1124
Query: 142 IVWR------LSSLGLNFDSGQPVPFHQWFSRWLSEAPDLEYVTF 26
+W LG N S + R S A L VTF
Sbjct: 1125 QIWEEIKGKCAVKLGRNGFSTMRQWIFDFLKRGSSHANTLLAVTF 1169
Score = 27.7 bits (60), Expect(2) = 2e-17
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -1
Query: 785 ATPK-PGITWGWRGILWGKDLLKIGLVWKVKRGR 687
A PK P TW R +L+G++LL G+ W V G+
Sbjct: 914 AQPKSPSFTW--RSLLFGRELLAKGVRWGVGDGK 945