BLASTX nr result

ID: Cephaelis21_contig00006002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006002
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518861.1| transcription factor, putative [Ricinus comm...    91   1e-16
ref|XP_002303671.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|XP_003631380.1| PREDICTED: LOW QUALITY PROTEIN: protein NLP7...    89   5e-16
emb|CBI34539.3| unnamed protein product [Vitis vinifera]               89   5e-16
ref|XP_002299449.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14

>ref|XP_002518861.1| transcription factor, putative [Ricinus communis]
           gi|223541848|gb|EEF43394.1| transcription factor,
           putative [Ricinus communis]
          Length = 1003

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 54/120 (45%), Positives = 77/120 (64%), Gaps = 3/120 (2%)
 Frame = -2

Query: 549 GRGVVGKAFSSKGACFCKDVSQLSIDKYSLVPSARKAGLTGCFAISLTHRACWV-DYVYI 373
           G+GV G+AF S  ACFC+D++Q    +Y LV  AR  GLTGCFAI L  R+ +  D  Y+
Sbjct: 403 GQGVAGRAFLSHNACFCQDITQFCKTEYPLVHYARLFGLTGCFAICL--RSSYTGDDDYV 460

Query: 372 VEFFF-DNKTESGDPRTLIKMLKATMKEHLRDFRVASGQELGKNL-FVEVIKTSPNDELD 199
           +EFF     ++S + ++L+  L ATMK+H +   VASG +L +   FVE+I+TS +  LD
Sbjct: 461 LEFFLPPTISDSYEQKSLLGSLLATMKQHFQSLNVASGMDLKEEEGFVEIIQTSTSGRLD 520


>ref|XP_002303671.1| predicted protein [Populus trichocarpa] gi|222841103|gb|EEE78650.1|
           predicted protein [Populus trichocarpa]
          Length = 953

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 51/123 (41%), Positives = 77/123 (62%), Gaps = 2/123 (1%)
 Frame = -2

Query: 549 GRGVVGKAFSSKGACFCKDVSQLSIDKYSLVPSARKAGLTGCFAISLTHRACWV-DYVYI 373
           G+GV G+AF S+ +CFC D++Q    +Y LV  AR  GLT CFAI L  R+ +  D  YI
Sbjct: 401 GQGVAGRAFLSQNSCFCPDITQFCKTEYPLVHYARMFGLTSCFAIFL--RSSYTGDDDYI 458

Query: 372 VEFFF-DNKTESGDPRTLIKMLKATMKEHLRDFRVASGQELGKNLFVEVIKTSPNDELDS 196
           +EFF   + T+S + +T +  + ATMK+  +  +VASG +L +  FVE+I+ + N  L+ 
Sbjct: 459 LEFFLPPSITDSHEQKTFLGSILATMKQDFQSLKVASGMDLEEEGFVEMIEATTNGRLEC 518

Query: 195 FEI 187
            +I
Sbjct: 519 IQI 521


>ref|XP_003631380.1| PREDICTED: LOW QUALITY PROTEIN: protein NLP7-like [Vitis vinifera]
          Length = 982

 Score = 89.0 bits (219), Expect = 5e-16
 Identities = 55/122 (45%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
 Frame = -2

Query: 549 GRGVVGKAFSSKGACFCKDVSQLSIDKYSLVPSARKAGLTGCFAISL--THRACWVDYVY 376
           G+GV G+AF S  +C+C +++Q    +Y LV  AR  GLT CFAI L  TH     +  Y
Sbjct: 397 GQGVAGRAFESHNSCYCSNITQFCKTEYPLVHYARMFGLTCCFAICLRSTHTG---NDDY 453

Query: 375 IVEFFF-DNKTESGDPRTLIKMLKATMKEHLRDFRVASGQEL-GKNLFVEVIKTSPNDEL 202
           I+EFF   + T+S D +TL+  L ATMK+H +  RVASG+E   +   VE+IK   N +L
Sbjct: 454 ILEFFLPPSITDSRDQQTLLDSLLATMKQHFQSLRVASGKEFEEEEKSVEIIKLPMNGKL 513

Query: 201 DS 196
           DS
Sbjct: 514 DS 515


>emb|CBI34539.3| unnamed protein product [Vitis vinifera]
          Length = 874

 Score = 89.0 bits (219), Expect = 5e-16
 Identities = 55/122 (45%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
 Frame = -2

Query: 549 GRGVVGKAFSSKGACFCKDVSQLSIDKYSLVPSARKAGLTGCFAISL--THRACWVDYVY 376
           G+GV G+AF S  +C+C +++Q    +Y LV  AR  GLT CFAI L  TH     +  Y
Sbjct: 394 GQGVAGRAFESHNSCYCSNITQFCKTEYPLVHYARMFGLTCCFAICLRSTHTG---NDDY 450

Query: 375 IVEFFF-DNKTESGDPRTLIKMLKATMKEHLRDFRVASGQEL-GKNLFVEVIKTSPNDEL 202
           I+EFF   + T+S D +TL+  L ATMK+H +  RVASG+E   +   VE+IK   N +L
Sbjct: 451 ILEFFLPPSITDSRDQQTLLDSLLATMKQHFQSLRVASGKEFEEEEKSVEIIKLPMNGKL 510

Query: 201 DS 196
           DS
Sbjct: 511 DS 512


>ref|XP_002299449.1| predicted protein [Populus trichocarpa] gi|222846707|gb|EEE84254.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 56/137 (40%), Positives = 78/137 (56%), Gaps = 4/137 (2%)
 Frame = -2

Query: 549 GRGVVGKAFSSKGACFCKDVSQLSIDKYSLVPSARKAGLTGCFAISLTHRACWV-DYVYI 373
           G+GV G+AF S   CFC D++Q    +Y LV  AR  GLT CFAI L  R+ +  D  YI
Sbjct: 358 GQGVAGRAFFSHNLCFCPDITQFCKTEYPLVHYARMFGLTSCFAICL--RSSYTGDDDYI 415

Query: 372 VEFFF-DNKTESGDPRTLIKMLKATMKEHLRDFRVASGQELGKNL-FVEVIKTSPNDELD 199
           +EFF   + T+S + +TL+  + A MK+  +  +VASG +L +   FVE+I+ S N  LD
Sbjct: 416 LEFFLPPSFTDSREWKTLLGSILAIMKQDFQSLQVASGMDLEEEEGFVEMIQVSTNGRLD 475

Query: 198 -SFEIYDLTSIDKRPSD 151
              E   +    K P D
Sbjct: 476 LRLECIQIPQSTKSPPD 492


Top