BLASTX nr result

ID: Cephaelis21_contig00005998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005998
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA33847.1| spliceosomal protein [Solanum tuberosum]               343   4e-92
ref|XP_002326095.1| predicted protein [Populus trichocarpa] gi|2...   311   2e-82
ref|XP_002271864.1| PREDICTED: U2 small nuclear ribonucleoprotei...   310   3e-82
ref|NP_001241278.1| uncharacterized protein LOC100805822 [Glycin...   300   3e-79
ref|XP_002517742.1| small nuclear ribonucleoprotein U)1a,U)2b, p...   296   4e-78

>gb|AAA33847.1| spliceosomal protein [Solanum tuberosum]
          Length = 231

 Score =  343 bits (880), Expect = 4e-92
 Identities = 177/231 (76%), Positives = 190/231 (82%)
 Frame = -1

Query: 933 MLTGDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTTKLRGQAWVVFS 754
           MLTGDIPPNQTIYI            KRSLY LFSQYGRI+DIVALKT KLRGQ+WVVFS
Sbjct: 2   MLTGDIPPNQTIYIKNLNEKVKKEELKRSLYCLFSQYGRIVDIVALKTPKLRGQSWVVFS 61

Query: 753 EVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCIAKAEGTYDXXXXXXXXXXXXXXXXXX 574
           EVTAASNAVRQMQNFPFYDKPMRIQYAK+KSDCIAKAEGTYD                  
Sbjct: 62  EVTAASNAVRQMQNFPFYDKPMRIQYAKSKSDCIAKAEGTYDKKKKQDEKVEKRKRTEET 121

Query: 573 XQTATTNGPRSDSNGGPAASSRPGRPGAQEAVTDPNKLLFIQNLPYETTSMMLEVLFKQY 394
            QT   NGPR+DSNGGPAA+SR G+P AQ+ V +PN +LFIQNLP+ETTSMMLEVLFKQY
Sbjct: 122 PQTGAANGPRTDSNGGPAAASRQGKPSAQD-VAEPNNILFIQNLPHETTSMMLEVLFKQY 180

Query: 393 PGFREVRMIEAKPGIAFVEFEDDIQSSVAMQALQGFKITPQNPMAISYAKK 241
           PGFREVRMIEAKPGIAFVEF+DD+QSSVAMQALQGFKITPQNPMAI+YAKK
Sbjct: 181 PGFREVRMIEAKPGIAFVEFDDDVQSSVAMQALQGFKITPQNPMAITYAKK 231


>ref|XP_002326095.1| predicted protein [Populus trichocarpa] gi|222862970|gb|EEF00477.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  311 bits (797), Expect = 2e-82
 Identities = 168/235 (71%), Positives = 181/235 (77%), Gaps = 4/235 (1%)
 Frame = -1

Query: 933 MLTGDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTTKLRGQAWVVFS 754
           MLTGDIPPNQTIYI            KRSLY LFSQYGRILD+VALKT +LRGQAWVVFS
Sbjct: 1   MLTGDIPPNQTIYIKNLNEKVKKEELKRSLYCLFSQYGRILDVVALKTARLRGQAWVVFS 60

Query: 753 EVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCIAKAEGTYD----XXXXXXXXXXXXXX 586
           EVTAASNAVRQMQ FPFYDKPMRIQYAKTKSDCIA+AEG YD                  
Sbjct: 61  EVTAASNAVRQMQGFPFYDKPMRIQYAKTKSDCIAEAEGVYDPNAKKKKKQEEKAERKKR 120

Query: 585 XXXXXQTATTNGPRSDSNGGPAASSRPGRPGAQEAVTDPNKLLFIQNLPYETTSMMLEVL 406
                Q+A  NG  ++SNGGP  S R G   AQE V  PN +LFIQNLP+ETTSMML+VL
Sbjct: 121 AEEAQQSAPANGKPAESNGGP-TSFRQGNQSAQETV-PPNNILFIQNLPHETTSMMLQVL 178

Query: 405 FKQYPGFREVRMIEAKPGIAFVEFEDDIQSSVAMQALQGFKITPQNPMAISYAKK 241
           F+QYPGFREVRMIEAKPGIAFVEFEDD+QSS+AMQALQGFKITPQNPMAI+YAKK
Sbjct: 179 FQQYPGFREVRMIEAKPGIAFVEFEDDVQSSMAMQALQGFKITPQNPMAITYAKK 233


>ref|XP_002271864.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Vitis vinifera]
           gi|297745807|emb|CBI15863.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  310 bits (795), Expect = 3e-82
 Identities = 159/234 (67%), Positives = 181/234 (77%), Gaps = 3/234 (1%)
 Frame = -1

Query: 933 MLTGDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTTKLRGQAWVVFS 754
           ML+GDIPPNQ+IYI            KRSLY LFSQYGRILD+VALKT KLRGQAWVVFS
Sbjct: 1   MLSGDIPPNQSIYIKNLNEKVKKEELKRSLYCLFSQYGRILDVVALKTPKLRGQAWVVFS 60

Query: 753 EVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCIAKAEGTY---DXXXXXXXXXXXXXXX 583
           EVTAASNAVRQMQNFPFYDKPMR+QYAKTKSDC+AKA+GT+   +               
Sbjct: 61  EVTAASNAVRQMQNFPFYDKPMRVQYAKTKSDCVAKADGTFVPREKKKKQEEKAEKKRRA 120

Query: 582 XXXXQTATTNGPRSDSNGGPAASSRPGRPGAQEAVTDPNKLLFIQNLPYETTSMMLEVLF 403
               Q+   NG  +++NGGP    R G  GA+E    PN +LFIQNLP++TTSMML+VLF
Sbjct: 121 EEAQQSGNANGRNAETNGGPTPPFRQGNQGAREPEAAPNNILFIQNLPHQTTSMMLQVLF 180

Query: 402 KQYPGFREVRMIEAKPGIAFVEFEDDIQSSVAMQALQGFKITPQNPMAISYAKK 241
           +QYPGFREVRMIEAKPGIAFVEFEDD+QSS+AM+ALQGFKITPQNPMAI+YAKK
Sbjct: 181 QQYPGFREVRMIEAKPGIAFVEFEDDVQSSMAMEALQGFKITPQNPMAIAYAKK 234


>ref|NP_001241278.1| uncharacterized protein LOC100805822 [Glycine max]
           gi|255647802|gb|ACU24361.1| unknown [Glycine max]
          Length = 232

 Score =  300 bits (769), Expect = 3e-79
 Identities = 159/234 (67%), Positives = 177/234 (75%), Gaps = 3/234 (1%)
 Frame = -1

Query: 933 MLTGDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTTKLRGQAWVVFS 754
           ML+GDIPPNQTIYI            KRSLY LFSQYGRILD++ALKT KLRGQAWV FS
Sbjct: 1   MLSGDIPPNQTIYIKNINEKVKKDELKRSLYCLFSQYGRILDVIALKTPKLRGQAWVCFS 60

Query: 753 EVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCIAKAEGTY---DXXXXXXXXXXXXXXX 583
           EVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCIAK EGTY   +               
Sbjct: 61  EVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCIAKEEGTYVPREKKKKQEEKAERKRRA 120

Query: 582 XXXXQTATTNGPRSDSNGGPAASSRPGRPGAQEAVTDPNKLLFIQNLPYETTSMMLEVLF 403
               Q+   NG  S SNGGP AS R G PGAQE    PN +LFI+NLP+ETT  MLE+LF
Sbjct: 121 EEAQQSGVANGTHSASNGGPTASFRQG-PGAQETAA-PNNILFIENLPHETTGRMLEMLF 178

Query: 402 KQYPGFREVRMIEAKPGIAFVEFEDDIQSSVAMQALQGFKITPQNPMAISYAKK 241
           +QYPGF+EVR+IEAKPGIAFV+FED++QSS+AMQAL GFKITPQNPM I++AKK
Sbjct: 179 EQYPGFKEVRLIEAKPGIAFVDFEDEVQSSMAMQALHGFKITPQNPMIITFAKK 232


>ref|XP_002517742.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
           communis] gi|223543140|gb|EEF44674.1| small nuclear
           ribonucleoprotein U)1a,U)2b, putative [Ricinus communis]
          Length = 233

 Score =  296 bits (759), Expect = 4e-78
 Identities = 162/235 (68%), Positives = 175/235 (74%), Gaps = 4/235 (1%)
 Frame = -1

Query: 933 MLTGDIPPNQTIYIXXXXXXXXXXXXKRSLYALFSQYGRILDIVALKTTKLRGQAWVVFS 754
           MLTGDIPPNQTIYI            KRSLY LFSQYGRILD+VALKT KLRGQAWV FS
Sbjct: 1   MLTGDIPPNQTIYIKNLNEKVKKEELKRSLYCLFSQYGRILDVVALKTPKLRGQAWVCFS 60

Query: 753 EVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCIAKAEGTYD----XXXXXXXXXXXXXX 586
           EV AASNAVRQMQ FPFYDKPMRIQYAKTKSDC+ +AEG YD                  
Sbjct: 61  EVMAASNAVRQMQGFPFYDKPMRIQYAKTKSDCLVEAEGNYDPNAKKKKKQEEKAERKRR 120

Query: 585 XXXXXQTATTNGPRSDSNGGPAASSRPGRPGAQEAVTDPNKLLFIQNLPYETTSMMLEVL 406
                Q+AT NG  + +N G  A  R G  G QEA   PN +LFIQNLP+ETTSMML+VL
Sbjct: 121 AEEAQQSATANGTSTVNNRG-TAPFRQGNRGEQEA-APPNNILFIQNLPHETTSMMLQVL 178

Query: 405 FKQYPGFREVRMIEAKPGIAFVEFEDDIQSSVAMQALQGFKITPQNPMAISYAKK 241
           F+QYPGFREVRMIEAKPGIAFVEFEDD+QSS+AMQALQ FKITPQNPMAI+YAKK
Sbjct: 179 FQQYPGFREVRMIEAKPGIAFVEFEDDVQSSMAMQALQSFKITPQNPMAITYAKK 233


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