BLASTX nr result

ID: Cephaelis21_contig00005970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005970
         (737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158063.1| PREDICTED: mediator of RNA polymerase II tra...    97   3e-18
ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II tra...    97   3e-18
ref|XP_002519035.1| conserved hypothetical protein [Ricinus comm...    97   3e-18
ref|XP_002329765.1| predicted protein [Populus trichocarpa] gi|2...    97   5e-18
ref|XP_002305810.1| predicted protein [Populus trichocarpa] gi|2...    96   6e-18

>ref|XP_004158063.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           16-like, partial [Cucumis sativus]
          Length = 133

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 46/53 (86%), Positives = 48/53 (90%)
 Frame = -2

Query: 160 SAVA*CGKLNAITCA*ETCTRIPSSHANPLFWIPIHIVIPEQPTECAVFNVIA 2
           SAVA CGKLNAI CA ETC RIPSS+ANP FWIPIHIVIPE+PTECAVFNVIA
Sbjct: 81  SAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIPERPTECAVFNVIA 133


>ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           16-like [Cucumis sativus]
          Length = 1220

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 46/53 (86%), Positives = 48/53 (90%)
 Frame = -2

Query: 160 SAVA*CGKLNAITCA*ETCTRIPSSHANPLFWIPIHIVIPEQPTECAVFNVIA 2
           SAVA CGKLNAI CA ETC RIPSS+ANP FWIPIHIVIPE+PTECAVFNVIA
Sbjct: 61  SAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIPERPTECAVFNVIA 113


>ref|XP_002519035.1| conserved hypothetical protein [Ricinus communis]
           gi|223541698|gb|EEF43246.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1255

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 46/53 (86%), Positives = 48/53 (90%)
 Frame = -2

Query: 160 SAVA*CGKLNAITCA*ETCTRIPSSHANPLFWIPIHIVIPEQPTECAVFNVIA 2
           SAVA CGKLNAI CA ETC RIPSS+ANP FWIPIHIVIPE+PTECAVFNVIA
Sbjct: 98  SAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIPERPTECAVFNVIA 150


>ref|XP_002329765.1| predicted protein [Populus trichocarpa] gi|222870827|gb|EEF07958.1|
           predicted protein [Populus trichocarpa]
          Length = 820

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 45/53 (84%), Positives = 48/53 (90%)
 Frame = -2

Query: 160 SAVA*CGKLNAITCA*ETCTRIPSSHANPLFWIPIHIVIPEQPTECAVFNVIA 2
           SAVA CGKLNAI CA ETC RIPSS+ANP FWIPIH+VIPE+PTECAVFNVIA
Sbjct: 72  SAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHVVIPERPTECAVFNVIA 124


>ref|XP_002305810.1| predicted protein [Populus trichocarpa] gi|222848774|gb|EEE86321.1|
           predicted protein [Populus trichocarpa]
          Length = 1328

 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 45/53 (84%), Positives = 48/53 (90%)
 Frame = -2

Query: 160 SAVA*CGKLNAITCA*ETCTRIPSSHANPLFWIPIHIVIPEQPTECAVFNVIA 2
           SAVA CGKLNAI CA ETC RIPSS+ANP FWIPIH+VIPE+PTECAVFNVIA
Sbjct: 89  SAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHLVIPERPTECAVFNVIA 141


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