BLASTX nr result

ID: Cephaelis21_contig00005926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005926
         (1564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265287.1| PREDICTED: ribosomal RNA large subunit methy...   574   e-161
ref|XP_002300266.1| predicted protein [Populus trichocarpa] gi|2...   569   e-160
ref|XP_004136937.1| PREDICTED: dual-specificity RNA methyltransf...   548   e-153
ref|XP_003558557.1| PREDICTED: ribosomal RNA large subunit methy...   531   e-148
ref|XP_002465681.1| hypothetical protein SORBIDRAFT_01g043670 [S...   526   e-147

>ref|XP_002265287.1| PREDICTED: ribosomal RNA large subunit methyltransferase N [Vitis
            vinifera] gi|147817733|emb|CAN60150.1| hypothetical
            protein VITISV_044331 [Vitis vinifera]
            gi|296083052|emb|CBI22456.3| unnamed protein product
            [Vitis vinifera]
          Length = 372

 Score =  574 bits (1480), Expect = e-161
 Identities = 295/372 (79%), Positives = 317/372 (85%), Gaps = 2/372 (0%)
 Frame = -3

Query: 1331 MTYKSIFDSSTLI-EFRNAQINTHFIPLIWKYVLQNPNLEWEDIPSLPTAAYSLLRSKFK 1155
            M   SIFD   L  +F +A I+ +FIP IWKYV+QNPN +W+DI SLP+AAY LLRS FK
Sbjct: 1    MAISSIFDGGELRRQFHSAGISPNFIPFIWKYVVQNPNCDWDDITSLPSAAYPLLRSHFK 60

Query: 1154 PTTSSLQSVLDSTDQVTTKLLIKLQNGAFVEAVIMRYDTRLGKYKGKARPGGLRSTLCIS 975
            P+TSSL +V+DS+D VTTKLLIKLQNG+FVEAVIMRYDTRLGKY GK RPGG RSTLCIS
Sbjct: 61   PSTSSLHTVIDSSDNVTTKLLIKLQNGSFVEAVIMRYDTRLGKYGGKPRPGGPRSTLCIS 120

Query: 974  SQVGCKMGCNFCATGSMGFKNNLSPGEIVEQLVLASGLSPIRNVVFMGMGEPLNNYSALV 795
            SQVGCKMGC FCATGSMGFK+NLS GEIVEQLV AS  S IRNVVFMGMGEPLNNYSALV
Sbjct: 121  SQVGCKMGCKFCATGSMGFKSNLSSGEIVEQLVHASHFSQIRNVVFMGMGEPLNNYSALV 180

Query: 794  EAIRIMTSPPFRLSPKKITVSTVGIIHGIKKLQHDVPNLNLAVSLHAPVQDIRCQIMPAA 615
            EAI IM   PF+LSPKKITVSTVGIIH I KLQ D+PNLNLAVSLHAPVQDIRCQIMPAA
Sbjct: 181  EAIHIMQGSPFQLSPKKITVSTVGIIHAINKLQSDLPNLNLAVSLHAPVQDIRCQIMPAA 240

Query: 614  RAFPLDKLMDALEEYQKKCKQKIFIEYVMLDGVNDEEQHAHQLAKLLETFQVVVNLIPFN 435
            RAFPL+KLMD L  YQ    QKIFIEY+MLD VNDEEQHAHQL KLLETFQVVVNLIPFN
Sbjct: 241  RAFPLEKLMDTLRTYQTNSGQKIFIEYIMLDEVNDEEQHAHQLGKLLETFQVVVNLIPFN 300

Query: 434  PIGTLSHFKTSSEHKINRFQKILREAYNIRTTVRKQMGQDISGACGQLVVNMPKKTYTG- 258
            PIG LS+FKTSSE K+ RFQKILR  YNIRTTVRKQMGQDISGACGQLVVN P K  TG 
Sbjct: 301  PIGNLSYFKTSSEQKVARFQKILRGTYNIRTTVRKQMGQDISGACGQLVVNQPDKRSTGS 360

Query: 257  GDLVTDIEDLHV 222
              L+TDIEDLH+
Sbjct: 361  AGLLTDIEDLHL 372


>ref|XP_002300266.1| predicted protein [Populus trichocarpa] gi|222847524|gb|EEE85071.1|
            predicted protein [Populus trichocarpa]
          Length = 373

 Score =  569 bits (1467), Expect = e-160
 Identities = 290/365 (79%), Positives = 314/365 (86%), Gaps = 1/365 (0%)
 Frame = -3

Query: 1319 SIFDSSTL-IEFRNAQINTHFIPLIWKYVLQNPNLEWEDIPSLPTAAYSLLRSKFKPTTS 1143
            SIFD   +  EF  A INTHFIP IWKYV++NPN EW+DIP LP+AAYSLLRSKFK +TS
Sbjct: 5    SIFDGPDVRAEFEKAGINTHFIPFIWKYVIKNPNCEWDDIPDLPSAAYSLLRSKFKTSTS 64

Query: 1142 SLQSVLDSTDQVTTKLLIKLQNGAFVEAVIMRYDTRLGKYKGKARPGGLRSTLCISSQVG 963
            S+ SV++S D VTTKLL+KLQNGAFVEAVIMRYDTRLGKY GK RPGG RSTLCISSQVG
Sbjct: 65   SVDSVINSNDGVTTKLLVKLQNGAFVEAVIMRYDTRLGKYCGKPRPGGPRSTLCISSQVG 124

Query: 962  CKMGCNFCATGSMGFKNNLSPGEIVEQLVLASGLSPIRNVVFMGMGEPLNNYSALVEAIR 783
            CKMGC FCATGSMGFKNNLS GEIVEQLV AS LS IRNVVFMGMGEPLNNYSALVEA+R
Sbjct: 125  CKMGCKFCATGSMGFKNNLSSGEIVEQLVHASCLSQIRNVVFMGMGEPLNNYSALVEAVR 184

Query: 782  IMTSPPFRLSPKKITVSTVGIIHGIKKLQHDVPNLNLAVSLHAPVQDIRCQIMPAARAFP 603
             M+  PF+LSPK+ITVSTVGIIH I KL  D+P LNLAVSLHAPVQD+RCQIMPAARAFP
Sbjct: 185  AMSGVPFQLSPKRITVSTVGIIHAINKLHKDLPGLNLAVSLHAPVQDVRCQIMPAARAFP 244

Query: 602  LDKLMDALEEYQKKCKQKIFIEYVMLDGVNDEEQHAHQLAKLLETFQVVVNLIPFNPIGT 423
            L+KLMDAL+ YQK   QKIFIEY+MLDGVNDEEQHAHQL KLLETF VVVNLIPFNPIG+
Sbjct: 245  LEKLMDALQVYQKNSMQKIFIEYIMLDGVNDEEQHAHQLGKLLETFDVVVNLIPFNPIGS 304

Query: 422  LSHFKTSSEHKINRFQKILREAYNIRTTVRKQMGQDISGACGQLVVNMPKKTYTGGDLVT 243
            LS F+TSSE K+ RFQKILR   NIRTTVRKQMGQDISGACGQLVVN+P +       VT
Sbjct: 305  LSQFRTSSEEKVLRFQKILRGVNNIRTTVRKQMGQDISGACGQLVVNLPDEKKPPNLGVT 364

Query: 242  DIEDL 228
            DIEDL
Sbjct: 365  DIEDL 369


>ref|XP_004136937.1| PREDICTED: dual-specificity RNA methyltransferase RlmN 1-like
            [Cucumis sativus] gi|449495695|ref|XP_004159917.1|
            PREDICTED: dual-specificity RNA methyltransferase RlmN
            1-like [Cucumis sativus]
          Length = 384

 Score =  548 bits (1413), Expect = e-153
 Identities = 278/381 (72%), Positives = 320/381 (83%), Gaps = 13/381 (3%)
 Frame = -3

Query: 1325 YKSIFDSSTL-IEFRNAQINTHFIPLIWKYVLQNPN----------LEWEDI-PSLPTAA 1182
            ++S FD+  L  EF  A I T FIP IWK++L +PN           +WE + PSLP+AA
Sbjct: 4    FRSAFDAGELRTEFEKAGIKTTFIPFIWKHLLHDPNNIFNHNLASEFQWEQVVPSLPSAA 63

Query: 1181 YSLLRSKFKPTTSSLQSVLDSTDQVTTKLLIKLQNGAFVEAVIMRYDTRLGKYKGKARPG 1002
            YSLLR KFKP TS++ SV+DS+DQVTTKLLIKLQ+GAFVEAVIMRYDTRLGKY GK RPG
Sbjct: 64   YSLLRLKFKPLTSTVHSVVDSSDQVTTKLLIKLQSGAFVEAVIMRYDTRLGKYGGKPRPG 123

Query: 1001 GLRSTLCISSQVGCKMGCNFCATGSMGFKNNLSPGEIVEQLVLASGLSPIRNVVFMGMGE 822
            GLRSTLCISSQVGCKMGC FCATG+MGFK+NL+ GEIVEQLV AS  S IRN+VFMGMGE
Sbjct: 124  GLRSTLCISSQVGCKMGCRFCATGTMGFKSNLTSGEIVEQLVHASRFSQIRNIVFMGMGE 183

Query: 821  PLNNYSALVEAIRIMTSPPFRLSPKKITVSTVGIIHGIKKLQHDVPNLNLAVSLHAPVQD 642
            PLNNYS+LVEA+R M +PPF LSPK+IT+STVGIIH I KL  D+P LNLAVSLHAPVQD
Sbjct: 184  PLNNYSSLVEAVRAMMAPPFLLSPKRITISTVGIIHAINKLHSDLPGLNLAVSLHAPVQD 243

Query: 641  IRCQIMPAARAFPLDKLMDALEEYQKKCKQKIFIEYVMLDGVNDEEQHAHQLAKLLETFQ 462
            IRCQIMPAARAFPL KLMDAL+EYQKK +QKI IEY+MLDGVNDEEQHAHQL KLLETFQ
Sbjct: 244  IRCQIMPAARAFPLQKLMDALQEYQKKSQQKILIEYIMLDGVNDEEQHAHQLGKLLETFQ 303

Query: 461  VVVNLIPFNPIGTLSHFKTSSEHKINRFQKILREAYNIRTTVRKQMGQDISGACGQLVVN 282
            V+VNLIPFNPIG+ S FKTSS+ K++ FQ++LR  YNIRTT+RKQMGQDISGACGQLVV+
Sbjct: 304  VIVNLIPFNPIGSSSQFKTSSDEKVSVFQQVLRGTYNIRTTIRKQMGQDISGACGQLVVS 363

Query: 281  MPKKTYT-GGDLVTDIEDLHV 222
            +P ++ +    +V DIEDLH+
Sbjct: 364  LPNRSSSKQSSVVPDIEDLHL 384


>ref|XP_003558557.1| PREDICTED: ribosomal RNA large subunit methyltransferase N 2-like
            [Brachypodium distachyon]
          Length = 382

 Score =  531 bits (1369), Expect = e-148
 Identities = 262/370 (70%), Positives = 315/370 (85%), Gaps = 3/370 (0%)
 Frame = -3

Query: 1322 KSIFDSSTL-IEFRNAQINTHFIPLIWKYVLQNPNL-EWEDIPSLPTAAYSLLRSKFKPT 1149
            +S+FD++ +  EF  A I+ HFIPLIWKYVLQNP   + + +PSLP AAY+LLR+KF+PT
Sbjct: 13   RSVFDAAYIRAEFDGAGISPHFIPLIWKYVLQNPRCGDLDGVPSLPAAAYALLRNKFRPT 72

Query: 1148 TSSLQSVLDSTDQVTTKLLIKLQNGAFVEAVIMRYDTRLGKYKGKARPGGLRSTLCISSQ 969
            TS+L +  +S D+ TTKLLI+LQNG  VEAV+MRYDTRLGKY GK RPGG+RSTLC+SSQ
Sbjct: 73   TSTLTAAAESKDRTTTKLLIRLQNGESVEAVVMRYDTRLGKYDGKPRPGGVRSTLCVSSQ 132

Query: 968  VGCKMGCNFCATGSMGFKNNLSPGEIVEQLVLASGLSPIRNVVFMGMGEPLNNYSALVEA 789
            VGCKMGC FCATG+MGFK+NLS GEIVEQLV AS  S IRNVVFMGMGEPLNNY+A+VEA
Sbjct: 133  VGCKMGCRFCATGTMGFKSNLSSGEIVEQLVHASRYSQIRNVVFMGMGEPLNNYTAVVEA 192

Query: 788  IRIMTSPPFRLSPKKITVSTVGIIHGIKKLQHDVPNLNLAVSLHAPVQDIRCQIMPAARA 609
            I ++T PPF+LSPK+ITVSTVGIIH I K  +D+PN+NLAVSLHAP QDIRCQIMPAARA
Sbjct: 193  IHVLTGPPFQLSPKRITVSTVGIIHSINKFNNDLPNINLAVSLHAPDQDIRCQIMPAARA 252

Query: 608  FPLDKLMDALEEYQKKCKQKIFIEYVMLDGVNDEEQHAHQLAKLLETFQVVVNLIPFNPI 429
            FPL KLM+AL+ YQ + KQ IFIEY+MLDGVND+EQHAHQL KLLETF+ VVNLIPFNPI
Sbjct: 253  FPLGKLMNALQSYQNESKQTIFIEYIMLDGVNDQEQHAHQLGKLLETFKAVVNLIPFNPI 312

Query: 428  GTLSHFKTSSEHKINRFQKILREAYNIRTTVRKQMGQDISGACGQLVVNMPKKTYTGG-D 252
            G+ S+FKTSS+  + +FQK+LR  Y+IRTTVR++MGQDI+GACGQLVV++P +   GG  
Sbjct: 313  GSSSNFKTSSDQSVKKFQKVLRGVYSIRTTVRQEMGQDIAGACGQLVVSLPDERSAGGAT 372

Query: 251  LVTDIEDLHV 222
            L++DIEDL +
Sbjct: 373  LLSDIEDLRI 382


>ref|XP_002465681.1| hypothetical protein SORBIDRAFT_01g043670 [Sorghum bicolor]
            gi|241919535|gb|EER92679.1| hypothetical protein
            SORBIDRAFT_01g043670 [Sorghum bicolor]
          Length = 381

 Score =  526 bits (1354), Expect = e-147
 Identities = 262/370 (70%), Positives = 311/370 (84%), Gaps = 3/370 (0%)
 Frame = -3

Query: 1322 KSIFDSSTL-IEFRNAQINTHFIPLIWKYVLQNPNL-EWEDIPSLPTAAYSLLRSKFKPT 1149
            +S+FD++ +  EF  A I+ HFIPLIWKYVLQNP   + + +PSLP AAY+LLR KF+PT
Sbjct: 12   RSVFDAAYIRSEFSAAGISGHFIPLIWKYVLQNPRCSDLDGVPSLPAAAYALLRQKFRPT 71

Query: 1148 TSSLQSVLDSTDQVTTKLLIKLQNGAFVEAVIMRYDTRLGKYKGKARPGGLRSTLCISSQ 969
            TS+L +  DS D+ TTKLLI LQNG  VEAV+MRYDTRLGKY GK RPGGLRSTLC+SSQ
Sbjct: 72   TSTLTAAADSKDRTTTKLLISLQNGESVEAVVMRYDTRLGKYDGKPRPGGLRSTLCVSSQ 131

Query: 968  VGCKMGCNFCATGSMGFKNNLSPGEIVEQLVLASGLSPIRNVVFMGMGEPLNNYSALVEA 789
            VGCKMGC FCATG+MGFK+NLS GEI+EQLV AS  S IRNVVFMGMGEP+NNY+ALVEA
Sbjct: 132  VGCKMGCRFCATGTMGFKSNLSSGEIIEQLVHASRYSQIRNVVFMGMGEPMNNYNALVEA 191

Query: 788  IRIMTSPPFRLSPKKITVSTVGIIHGIKKLQHDVPNLNLAVSLHAPVQDIRCQIMPAARA 609
            I + T  PF+LSPK+ITVSTVGIIHGI K   D+P +NLAVSLHAP QDIRCQIMPAARA
Sbjct: 192  IGVFTGSPFQLSPKRITVSTVGIIHGINKFNADLPKVNLAVSLHAPDQDIRCQIMPAARA 251

Query: 608  FPLDKLMDALEEYQKKCKQKIFIEYVMLDGVNDEEQHAHQLAKLLETFQVVVNLIPFNPI 429
            FPL KLM+AL+ YQ + KQ IFIEY+MLDGVND+E+HAHQL KLLETF+ VVNLIPFNPI
Sbjct: 252  FPLVKLMNALQSYQNESKQTIFIEYIMLDGVNDQEEHAHQLGKLLETFKAVVNLIPFNPI 311

Query: 428  GTLSHFKTSSEHKINRFQKILREAYNIRTTVRKQMGQDISGACGQLVVNMPKKTYTGG-D 252
            G+LS+FKTSS+  + +FQK+L+  Y+IRTTVR+QMGQDI+GACGQLVV++P +   GG  
Sbjct: 312  GSLSNFKTSSDQNVKKFQKVLKGIYHIRTTVRQQMGQDIAGACGQLVVSLPDERSAGGAT 371

Query: 251  LVTDIEDLHV 222
            L++DIEDL +
Sbjct: 372  LLSDIEDLRI 381


Top