BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005831
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34321.1| RNase H family protein [Solanum demissum]               72   7e-11
gb|ABN08796.1| Ribonuclease H [Medicago truncatula]                    71   2e-10
gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    70   4e-10
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    69   8e-10
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    67   2e-09

>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 53/169 (31%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
 Frame = -1

Query: 577  VVTWLNPSPSCFKINVDXXXXXXXXXXXXGVIIRDEYGNFVAAQCSFFGHATSLQAEISA 398
            +V W  P+ +C KIN D              I+RD     + A       +++  AE  A
Sbjct: 744  IVHWNTPNINCVKINTDGSFSSGNAGLGW--IVRDHTRRMIMAFSIPSSCSSNNLAEALA 801

Query: 397  AISGLQLARLLGLTSCVLELDSKLVVDMILGNAGWPWRYHALLFQLQQHSSVMNCQIYHI 218
            A  G+      G  +C LELDSKLVVDM+        +   ++  + Q  + MNC++ H 
Sbjct: 802  ARFGILWCLQQGFHNCYLELDSKLVVDMVRNGQATNLKIKGVVEDIIQVVAKMNCEVNHC 861

Query: 217  YREANAVADGLSRIA-SSQEATGRIQYNELHLYIRGLIALDRVHYPYFR 74
            YREAN VAD L++ A  S EA     + ++     G   LD++  P  R
Sbjct: 862  YREANQVADALAKHAVISNEAHMYHDWRDIPKLAVGSYQLDKMQMPSIR 910


>gb|ABN08796.1| Ribonuclease H [Medicago truncatula]
          Length = 221

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 49/167 (29%), Positives = 71/167 (42%)
 Frame = -1

Query: 574 VTWLNPSPSCFKINVDXXXXXXXXXXXXGVIIRDEYGNFVAAQCSFFGHATSLQAEISAA 395
           + W  P     KIN D            G++IRD   +F+ A  S  G+AT L+AE  A 
Sbjct: 51  IIWKPPIGDIVKINCDGSSVGRHPCGSIGIVIRDSNHHFLGAISSNIGNATPLEAEFCAG 110

Query: 394 ISGLQLARLLGLTSCVLELDSKLVVDMILGNAGWPWRYHALLFQLQQHSSVMNCQIYHIY 215
           +  ++ A+ + L    LE DS  VV+      G PW+  A           ++C   HI 
Sbjct: 111 MMAMEKAQEMQLMHVCLETDSLKVVNAFNKGLGVPWQMRARWQNCWDFCDSISCSCVHIL 170

Query: 214 REANAVADGLSRIASSQEATGRIQYNELHLYIRGLIALDRVHYPYFR 74
           RE N VAD L++            +     +I  L+  DR+  PY R
Sbjct: 171 REGNMVADALAKHGQGLSLYYTQLWTSPPPFIYHLLLRDRLGLPYTR 217


>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 1/173 (0%)
 Frame = -1

Query: 589  RSTIVVTWLNPSPSCFKINVDXXXXXXXXXXXXGVIIRDEYGNFVAAQCSFFGHATSLQA 410
            ++ I V W+ P     K+N D              I+R+  G  + A     G  TS  A
Sbjct: 985  KNVIRVNWIKPPTMFAKLNTDGSCVNGRCGGGG--ILRNALGQVIMAFTIKLGEGTSSWA 1042

Query: 409  EISAAISGLQLARLLGLTSCVLELDSKLVVDMILGNAGWPWRYHALLFQLQQHSSVMNCQ 230
            E  + + G+QL    G+   + E DS L+   I  N   PWR +  + ++Q+        
Sbjct: 1043 EAMSMLHGMQLCIQRGVNMIIGETDSILLAKAITENWSIPWRMYIPVKKIQKMVEEHGFI 1102

Query: 229  IYHIYREANAVADGLSRIASSQEATGRIQ-YNELHLYIRGLIALDRVHYPYFR 74
            I H  REAN  AD L+ I+ S +     + Y  L   ++GL+ LDR++ P FR
Sbjct: 1103 INHCLREANQPADKLASISLSTDVNHVFKSYANLPSLVKGLVNLDRMNLPTFR 1155


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 68.9 bits (167), Expect = 8e-10
 Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
 Frame = -1

Query: 574 VTWLNPSPSCFKINVDXXXXXXXXXXXXGVIIRDEYGNFVAAQCSFFGHATSLQAEISAA 395
           + W+ P   C KIN D            GVI R     F  A     G+AT+L+AE SA 
Sbjct: 243 IIWVPPHGGCMKINCDGSVVGSPSCGSIGVIFRASQTMFCGAFAQNIGYATALEAEYSAC 302

Query: 394 ISGLQLARLLGLTSCVLELDSKLVVDMILGNAGWPWRYHALLFQLQQHSSVMNCQ----- 230
           +  ++ A+ L LT+  +E DS  V+     N G PW+ H     ++ H+ ++ C+     
Sbjct: 303 MFAIEKAKELHLTNIWIETDSVNVIRAFHFNTGVPWKMH-----IRWHNCLLFCRSIRSL 357

Query: 229 IYHIYREANAVADGLSR 179
             H+ RE N VAD L++
Sbjct: 358 CTHVNREGNLVADALAK 374


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 42/132 (31%), Positives = 60/132 (45%)
 Frame = -1

Query: 574 VTWLNPSPSCFKINVDXXXXXXXXXXXXGVIIRDEYGNFVAAQCSFFGHATSLQAEISAA 395
           + W  P     KIN D            G++IRD   +F+ A  S  G+AT L+AE  A 
Sbjct: 214 IIWKPPIGDIVKINCDGSSVGRHPCGSIGIVIRDSNHHFLGAISSNIGNATPLEAEFCAG 273

Query: 394 ISGLQLARLLGLTSCVLELDSKLVVDMILGNAGWPWRYHALLFQLQQHSSVMNCQIYHIY 215
           +  ++ A+ + L    LE DS  VV+      G PW+  A           ++C   HI 
Sbjct: 274 MMAMEKAQEMQLMHVCLETDSLKVVNAFNKGLGVPWQMRARWQNCWDFCDSISCSCVHIL 333

Query: 214 REANAVADGLSR 179
           RE N VAD L++
Sbjct: 334 REGNMVADALAK 345