BLASTX nr result

ID: Cephaelis21_contig00005796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005796
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523208.1| PREDICTED: small nuclear ribonucleoprotein E...   132   2e-31
ref|XP_003542280.1| PREDICTED: small nuclear ribonucleoprotein E...   132   2e-31
ref|XP_004139778.1| PREDICTED: small nuclear ribonucleoprotein E...   133   4e-31
ref|XP_003597961.1| Small nuclear ribonucleoprotein E [Medicago ...   131   4e-31
ref|XP_002522808.1| Small nuclear ribonucleoprotein E, putative ...   131   4e-31

>ref|XP_003523208.1| PREDICTED: small nuclear ribonucleoprotein E-like [Glycine max]
           gi|356516401|ref|XP_003526883.1| PREDICTED: small
           nuclear ribonucleoprotein E [Glycine max]
           gi|388501720|gb|AFK38926.1| unknown [Lotus japonicus]
          Length = 88

 Score =  132 bits (333), Expect(2) = 2e-31
 Identities = 66/71 (92%), Positives = 68/71 (95%)
 Frame = +2

Query: 101 TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLMIEGRIIGFDEYMNLVLDEAEEVNTK 280
           TKVQR+MTQPINLIFRFLQSKARIQIWLFEQKDL IEGRIIGFDEYMNLVLD+AEEVN K
Sbjct: 4   TKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVNVK 63

Query: 281 KKSRKQLGRIL 313
           KKSRK LGRIL
Sbjct: 64  KKSRKTLGRIL 74



 Score = 28.9 bits (63), Expect(2) = 2e-31
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +1

Query: 316 GDNITLMMNTGK 351
           GDNITLMMNTGK
Sbjct: 77  GDNITLMMNTGK 88


>ref|XP_003542280.1| PREDICTED: small nuclear ribonucleoprotein E-like [Glycine max]
           gi|255627911|gb|ACU14300.1| unknown [Glycine max]
          Length = 88

 Score =  132 bits (332), Expect(2) = 2e-31
 Identities = 66/71 (92%), Positives = 68/71 (95%)
 Frame = +2

Query: 101 TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLMIEGRIIGFDEYMNLVLDEAEEVNTK 280
           TKVQR+MTQPINLIFRFLQSKARIQIWLFEQKDL IEGRIIGFDEYMNLVLD+AEEVN K
Sbjct: 4   TKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVNIK 63

Query: 281 KKSRKQLGRIL 313
           KKSRK LGRIL
Sbjct: 64  KKSRKTLGRIL 74



 Score = 28.9 bits (63), Expect(2) = 2e-31
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +1

Query: 316 GDNITLMMNTGK 351
           GDNITLMMNTGK
Sbjct: 77  GDNITLMMNTGK 88


>ref|XP_004139778.1| PREDICTED: small nuclear ribonucleoprotein E-like [Cucumis sativus]
           gi|449444032|ref|XP_004139779.1| PREDICTED: small
           nuclear ribonucleoprotein E-like [Cucumis sativus]
           gi|449502888|ref|XP_004161771.1| PREDICTED: small
           nuclear ribonucleoprotein E-like [Cucumis sativus]
          Length = 88

 Score =  133 bits (334), Expect(2) = 4e-31
 Identities = 67/71 (94%), Positives = 68/71 (95%)
 Frame = +2

Query: 101 TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLMIEGRIIGFDEYMNLVLDEAEEVNTK 280
           TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDL IEGRIIGFDEYMNLVLD+AEEVN K
Sbjct: 4   TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVNVK 63

Query: 281 KKSRKQLGRIL 313
           KKSRK LGRIL
Sbjct: 64  KKSRKTLGRIL 74



 Score = 27.3 bits (59), Expect(2) = 4e-31
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +1

Query: 316 GDNITLMMNTGK 351
           GDNITLMMN+GK
Sbjct: 77  GDNITLMMNSGK 88


>ref|XP_003597961.1| Small nuclear ribonucleoprotein E [Medicago truncatula]
           gi|357491039|ref|XP_003615807.1| Small nuclear
           ribonucleoprotein E [Medicago truncatula]
           gi|355487009|gb|AES68212.1| Small nuclear
           ribonucleoprotein E [Medicago truncatula]
           gi|355517142|gb|AES98765.1| Small nuclear
           ribonucleoprotein E [Medicago truncatula]
           gi|388498322|gb|AFK37227.1| unknown [Medicago
           truncatula]
          Length = 88

 Score =  131 bits (330), Expect(2) = 4e-31
 Identities = 65/71 (91%), Positives = 68/71 (95%)
 Frame = +2

Query: 101 TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLMIEGRIIGFDEYMNLVLDEAEEVNTK 280
           TKVQR+MTQPINLIFRFLQSKARIQIWLFEQKDL IEGRIIGFDEYMNLVLD+AEEVN K
Sbjct: 4   TKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVNVK 63

Query: 281 KKSRKQLGRIL 313
           KKS+K LGRIL
Sbjct: 64  KKSKKTLGRIL 74



 Score = 28.9 bits (63), Expect(2) = 4e-31
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +1

Query: 316 GDNITLMMNTGK 351
           GDNITLMMNTGK
Sbjct: 77  GDNITLMMNTGK 88


>ref|XP_002522808.1| Small nuclear ribonucleoprotein E, putative [Ricinus communis]
           gi|223538046|gb|EEF39659.1| Small nuclear
           ribonucleoprotein E, putative [Ricinus communis]
          Length = 88

 Score =  131 bits (330), Expect(2) = 4e-31
 Identities = 66/71 (92%), Positives = 67/71 (94%)
 Frame = +2

Query: 101 TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLMIEGRIIGFDEYMNLVLDEAEEVNTK 280
           TKVQRIMTQPINLIFRFLQSKARIQ WLFEQKDL IEGRIIGFDEYMNLVLD+AEEVN K
Sbjct: 4   TKVQRIMTQPINLIFRFLQSKARIQFWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVNVK 63

Query: 281 KKSRKQLGRIL 313
           KKSRK LGRIL
Sbjct: 64  KKSRKTLGRIL 74



 Score = 28.9 bits (63), Expect(2) = 4e-31
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +1

Query: 316 GDNITLMMNTGK 351
           GDNITLMMNTGK
Sbjct: 77  GDNITLMMNTGK 88


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