BLASTX nr result

ID: Cephaelis21_contig00005780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005780
         (881 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [...   142   1e-31
gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamari...   140   4e-31
ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycin...   139   7e-31
gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sa...   139   1e-30
ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycin...   138   1e-30

>ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 134

 Score =  142 bits (357), Expect = 1e-31
 Identities = 75/122 (61%), Positives = 89/122 (72%)
 Frame = -1

Query: 749 MAFFNRVGSLLSQSSKANASIAPVPISSMLNTIRSMSSMKLFVGGLSYGTDDSSLKEAFS 570
           MAF N++GSL+ QS   N     VP+SSMLN+IR MSS KLF+GGLSYGT+D SLK+AFS
Sbjct: 1   MAFCNKIGSLVRQSVAQNGK---VPVSSMLNSIRCMSSSKLFIGGLSYGTNDDSLKDAFS 57

Query: 569 GFGEVIEAKVITDRESGRSRGFGFVXXXXXXXXXXXXXAMDGQALQGRNIRVSFAQERPA 390
           GFG+V+ A+VITDR++GRSRGFGFV             AMDGQ L GRNIRVS+A ER  
Sbjct: 58  GFGDVVTARVITDRDTGRSRGFGFVDFSSVDSASSALSAMDGQELHGRNIRVSYATERAP 117

Query: 389 AP 384
            P
Sbjct: 118 RP 119


>gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamarix hispida]
          Length = 143

 Score =  140 bits (353), Expect = 4e-31
 Identities = 75/122 (61%), Positives = 89/122 (72%)
 Frame = -1

Query: 749 MAFFNRVGSLLSQSSKANASIAPVPISSMLNTIRSMSSMKLFVGGLSYGTDDSSLKEAFS 570
           MAF NR+GSL+ Q+   N++    PI SMLN+IR MSS +LFVGGLS+GTDD SLK+AFS
Sbjct: 1   MAFCNRIGSLIRQTVSQNSA----PIDSMLNSIRCMSSSRLFVGGLSWGTDDQSLKDAFS 56

Query: 569 GFGEVIEAKVITDRESGRSRGFGFVXXXXXXXXXXXXXAMDGQALQGRNIRVSFAQERPA 390
            FGEV +AKVITDRE+GRSRGFGFV             +MDG  L GR+IRVSFAQER +
Sbjct: 57  SFGEVTDAKVITDRETGRSRGFGFVNFVDNEAAGSALSSMDGVELNGRSIRVSFAQERSS 116

Query: 389 AP 384
            P
Sbjct: 117 GP 118


>ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
           gi|255631812|gb|ACU16273.1| unknown [Glycine max]
          Length = 138

 Score =  139 bits (351), Expect = 7e-31
 Identities = 73/122 (59%), Positives = 89/122 (72%)
 Frame = -1

Query: 749 MAFFNRVGSLLSQSSKANASIAPVPISSMLNTIRSMSSMKLFVGGLSYGTDDSSLKEAFS 570
           MAF N+VG++L Q +   A     P+SSMLN IR MSS KLF+GGLSYG DD SLK+AFS
Sbjct: 1   MAFCNKVGNVLRQGA---ARSTQAPVSSMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFS 57

Query: 569 GFGEVIEAKVITDRESGRSRGFGFVXXXXXXXXXXXXXAMDGQALQGRNIRVSFAQERPA 390
           GFG+V++AKVITDR+SGRSRGFGFV             AMDG+ L GR+IRVS+A +RP+
Sbjct: 58  GFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLDGRSIRVSYANDRPS 117

Query: 389 AP 384
            P
Sbjct: 118 GP 119


>gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
           gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding
           protein [Pisum sativum]
          Length = 146

 Score =  139 bits (349), Expect = 1e-30
 Identities = 71/122 (58%), Positives = 90/122 (73%)
 Frame = -1

Query: 749 MAFFNRVGSLLSQSSKANASIAPVPISSMLNTIRSMSSMKLFVGGLSYGTDDSSLKEAFS 570
           MAF N++G+LL Q +  ++     P+SSMLN +R MSS KLF+GGLSYG DD SLK+AF+
Sbjct: 1   MAFCNKLGNLLRQGATQSSH---APVSSMLNYLRHMSSSKLFIGGLSYGVDDQSLKDAFA 57

Query: 569 GFGEVIEAKVITDRESGRSRGFGFVXXXXXXXXXXXXXAMDGQALQGRNIRVSFAQERPA 390
            +GEV+EA+VITDR++GRSRGFGFV             AMDGQ L GRNIRVS+A +RP+
Sbjct: 58  SYGEVVEARVITDRDTGRSRGFGFVNFTSDESATSALSAMDGQDLNGRNIRVSYANDRPS 117

Query: 389 AP 384
           AP
Sbjct: 118 AP 119


>ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycine max]
           gi|255627057|gb|ACU13873.1| unknown [Glycine max]
          Length = 143

 Score =  138 bits (348), Expect = 1e-30
 Identities = 72/122 (59%), Positives = 90/122 (73%)
 Frame = -1

Query: 749 MAFFNRVGSLLSQSSKANASIAPVPISSMLNTIRSMSSMKLFVGGLSYGTDDSSLKEAFS 570
           MAF N+VG++L Q +   A     P++SMLN IR MSS KLF+GGLSYG DD SLK+AFS
Sbjct: 1   MAFCNKVGNVLRQGA---ARSTHAPVASMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFS 57

Query: 569 GFGEVIEAKVITDRESGRSRGFGFVXXXXXXXXXXXXXAMDGQALQGRNIRVSFAQERPA 390
           GFG+V++AKVITDR+SGRSRGFGFV             AMDG+ L GR+IRVS+A ++P+
Sbjct: 58  GFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLNGRSIRVSYANDKPS 117

Query: 389 AP 384
           AP
Sbjct: 118 AP 119


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