BLASTX nr result

ID: Cephaelis21_contig00005693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005693
         (1070 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531675.1| poly-A binding protein, putative [Ricinus co...   328   1e-87
ref|XP_002306300.1| predicted protein [Populus trichocarpa] gi|2...   325   2e-86
ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2-l...   320   4e-85
ref|XP_004146877.1| PREDICTED: polyadenylate-binding protein 2-l...   319   8e-85
ref|XP_002309968.1| predicted protein [Populus trichocarpa] gi|2...   318   1e-84

>ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis]
           gi|223528706|gb|EEF30719.1| poly-A binding protein,
           putative [Ricinus communis]
          Length = 218

 Score =  328 bits (842), Expect = 1e-87
 Identities = 161/211 (76%), Positives = 174/211 (82%), Gaps = 1/211 (0%)
 Frame = +3

Query: 72  VYGGEIPD-EGEMEGDNADVDMTNPDDDAVKXXXXXXXXXXXXXXXXXXXXXXQAKVEKE 248
           VYGGEIPD EG+++  N D+DM+  DDDAVK                      QAKVEKE
Sbjct: 8   VYGGEIPDMEGDIDPHNVDMDMSAADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKE 67

Query: 249 MGAVQDPANAAASQANKEEVDSRSIFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 428
           MGAVQDPA+AAA+QANKEE DSRS+FVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG
Sbjct: 68  MGAVQDPASAAANQANKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 127

Query: 429 HPKGFAYVEFLEQEAVQEAVVLNESELHGRQLKVMAKRTNVPGMKQYRGRRFNPYVGLRG 608
            PKGFAYVEFLE EA+QEA++LNESELHGRQLKV+ KRTNVPGMKQYR RRFNPY+G R 
Sbjct: 128 QPKGFAYVEFLEVEAIQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMGYRF 187

Query: 609 RRPYVPPYFYSPYGYGKVPRFRRPTRYMPYY 701
           RRPYVPPYFYSPYGYGK PRFRRP RYMPYY
Sbjct: 188 RRPYVPPYFYSPYGYGKAPRFRRPMRYMPYY 218


>ref|XP_002306300.1| predicted protein [Populus trichocarpa] gi|222855749|gb|EEE93296.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  325 bits (832), Expect = 2e-86
 Identities = 162/211 (76%), Positives = 170/211 (80%), Gaps = 1/211 (0%)
 Frame = +3

Query: 72  VYGGEIPD-EGEMEGDNADVDMTNPDDDAVKXXXXXXXXXXXXXXXXXXXXXXQAKVEKE 248
           VYGGEIPD EG+M+  NADVDM+  DDDAVK                      QAKVEKE
Sbjct: 8   VYGGEIPDVEGDMDPHNADVDMSAADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKE 67

Query: 249 MGAVQDPANAAASQANKEEVDSRSIFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 428
           MGAVQDPA AAA+QAN+EE DSRS+FVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG
Sbjct: 68  MGAVQDPATAAANQANREEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 127

Query: 429 HPKGFAYVEFLEQEAVQEAVVLNESELHGRQLKVMAKRTNVPGMKQYRGRRFNPYVGLRG 608
            PKGFAYVEFLE EAVQEA+ LNESELHGRQLKV  KRTNVPGMKQYR RR NPY+G R 
Sbjct: 128 QPKGFAYVEFLEVEAVQEALALNESELHGRQLKVSPKRTNVPGMKQYRPRRINPYMGYRF 187

Query: 609 RRPYVPPYFYSPYGYGKVPRFRRPTRYMPYY 701
           RRPY PPYFYSPYGYGKVPRFRR  RYMPYY
Sbjct: 188 RRPYAPPYFYSPYGYGKVPRFRRSMRYMPYY 218


>ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
          Length = 215

 Score =  320 bits (820), Expect = 4e-85
 Identities = 159/211 (75%), Positives = 172/211 (81%), Gaps = 1/211 (0%)
 Frame = +3

Query: 72  VYGGEIPDEGEMEGDNADVDMTNPDDDA-VKXXXXXXXXXXXXXXXXXXXXXXQAKVEKE 248
           VYGGEIPDEGEMEGD   +DM+  DDDA VK                      QAKV+KE
Sbjct: 8   VYGGEIPDEGEMEGD---IDMSAADDDAAVKELDEMKRRLKEMEEEAAALREMQAKVDKE 64

Query: 249 MGAVQDPANAAASQANKEEVDSRSIFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 428
           +G+VQDPAN+AASQANKEE DSRS+FVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG
Sbjct: 65  IGSVQDPANSAASQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 124

Query: 429 HPKGFAYVEFLEQEAVQEAVVLNESELHGRQLKVMAKRTNVPGMKQYRGRRFNPYVGLRG 608
            PKGFAYVEF+E EAVQEA++LNESELHGRQLKV+ KRTNVPGMKQYR RRFNPY+    
Sbjct: 125 QPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMAYGF 184

Query: 609 RRPYVPPYFYSPYGYGKVPRFRRPTRYMPYY 701
           RRPY PPYFYSPYGYGKVPRFRRP RYMPY+
Sbjct: 185 RRPYTPPYFYSPYGYGKVPRFRRPNRYMPYH 215


>ref|XP_004146877.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
          Length = 212

 Score =  319 bits (817), Expect = 8e-85
 Identities = 161/210 (76%), Positives = 168/210 (80%)
 Frame = +3

Query: 72  VYGGEIPDEGEMEGDNADVDMTNPDDDAVKXXXXXXXXXXXXXXXXXXXXXXQAKVEKEM 251
           VYGGEIP EGEMEGD   VDM+  DDDAVK                      QAKVEKEM
Sbjct: 8   VYGGEIPVEGEMEGD---VDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEM 64

Query: 252 GAVQDPANAAASQANKEEVDSRSIFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGH 431
           GAVQDPA  +ASQA KEE DSRS+FVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 
Sbjct: 65  GAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ 124

Query: 432 PKGFAYVEFLEQEAVQEAVVLNESELHGRQLKVMAKRTNVPGMKQYRGRRFNPYVGLRGR 611
           PKGFAYVEFLE EAVQEA+VLNESELHGRQLKV+ KRTNVPGMKQYR RR+NPYVG   R
Sbjct: 125 PKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVGF--R 182

Query: 612 RPYVPPYFYSPYGYGKVPRFRRPTRYMPYY 701
           RPY PPYFYSPYGYGK+PRFRR  RYMPYY
Sbjct: 183 RPYAPPYFYSPYGYGKMPRFRRSMRYMPYY 212


>ref|XP_002309968.1| predicted protein [Populus trichocarpa] gi|222852871|gb|EEE90418.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  318 bits (816), Expect = 1e-84
 Identities = 159/211 (75%), Positives = 169/211 (80%), Gaps = 1/211 (0%)
 Frame = +3

Query: 72  VYGGEIPD-EGEMEGDNADVDMTNPDDDAVKXXXXXXXXXXXXXXXXXXXXXXQAKVEKE 248
           VYGGEIPD EG+M+  NADVDM+  +DDAVK                      QAKVEKE
Sbjct: 8   VYGGEIPDVEGDMDPHNADVDMSAAEDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKE 67

Query: 249 MGAVQDPANAAASQANKEEVDSRSIFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 428
           MGAV DPA+AAA+QANKEE DSRS+FVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG
Sbjct: 68  MGAVPDPASAAANQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 127

Query: 429 HPKGFAYVEFLEQEAVQEAVVLNESELHGRQLKVMAKRTNVPGMKQYRGRRFNPYVGLRG 608
            PKGFAYVEF+E EAVQEA+ LNESELHGRQLKV  KRTNVPGMKQY  R FNPY+G R 
Sbjct: 128 QPKGFAYVEFVEVEAVQEALALNESELHGRQLKVSPKRTNVPGMKQYHPRSFNPYMGNRF 187

Query: 609 RRPYVPPYFYSPYGYGKVPRFRRPTRYMPYY 701
           RRPY PPYFYSPYGYGKVPRFRR  RYMPYY
Sbjct: 188 RRPYAPPYFYSPYGYGKVPRFRRSMRYMPYY 218


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