BLASTX nr result

ID: Cephaelis21_contig00005632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005632
         (1140 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containi...   166   1e-38
emb|CBI35665.3| unnamed protein product [Vitis vinifera]              166   1e-38
ref|XP_002303755.1| predicted protein [Populus trichocarpa] gi|2...   163   7e-38
ref|XP_002299341.1| predicted protein [Populus trichocarpa] gi|2...   158   2e-36
ref|XP_002512657.1| pentatricopeptide repeat-containing protein,...   151   3e-34

>ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
            chloroplastic-like [Vitis vinifera]
          Length = 835

 Score =  166 bits (420), Expect = 1e-38
 Identities = 81/128 (63%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
 Frame = -1

Query: 594  WAARVLVNSDEACNHGRKDIGLPSQVARFSKTFRAIPRTPKSKTSAFLDKCGMFAS-DGP 418
            WAARVLVNSDEAC HGRK +GLPSQVARFSK   AIPR  +SKT+ FL+  G+  + + P
Sbjct: 619  WAARVLVNSDEACVHGRKAVGLPSQVARFSKRITAIPRQQRSKTNGFLNMIGIGNTFNSP 678

Query: 417  KSCMDIQVTEIKGLSAMNLCNINLSTSGLELESSKWMGPHVKMSLPSYSGRTKYNSDLLK 238
            K CMD+QVTEI+G +A + C++NL+T+   L+  KWMGP +KMSLPS+SG T YN +LLK
Sbjct: 679  KDCMDVQVTEIEGHTAADACSVNLNTAVPLLKPEKWMGPAIKMSLPSFSGHTVYNPNLLK 738

Query: 237  YSCDIECR 214
            YSC IECR
Sbjct: 739  YSCQIECR 746


>emb|CBI35665.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score =  166 bits (420), Expect = 1e-38
 Identities = 81/128 (63%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
 Frame = -1

Query: 594 WAARVLVNSDEACNHGRKDIGLPSQVARFSKTFRAIPRTPKSKTSAFLDKCGMFAS-DGP 418
           WAARVLVNSDEAC HGRK +GLPSQVARFSK   AIPR  +SKT+ FL+  G+  + + P
Sbjct: 107 WAARVLVNSDEACVHGRKAVGLPSQVARFSKRITAIPRQQRSKTNGFLNMIGIGNTFNSP 166

Query: 417 KSCMDIQVTEIKGLSAMNLCNINLSTSGLELESSKWMGPHVKMSLPSYSGRTKYNSDLLK 238
           K CMD+QVTEI+G +A + C++NL+T+   L+  KWMGP +KMSLPS+SG T YN +LLK
Sbjct: 167 KDCMDVQVTEIEGHTAADACSVNLNTAVPLLKPEKWMGPAIKMSLPSFSGHTVYNPNLLK 226

Query: 237 YSCDIECR 214
           YSC IECR
Sbjct: 227 YSCQIECR 234


>ref|XP_002303755.1| predicted protein [Populus trichocarpa] gi|222841187|gb|EEE78734.1|
           predicted protein [Populus trichocarpa]
          Length = 292

 Score =  163 bits (413), Expect = 7e-38
 Identities = 80/128 (62%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
 Frame = -1

Query: 594 WAARVLVNSDEACNHGRKDIGLPSQVARFSKTFRAIPRTPKSKTSAFLDKCGM-FASDGP 418
           WAARVLVNS +AC+HGRK++GLPSQVA+FSK   AIPR  KSK + FLDK G+  AS   
Sbjct: 93  WAARVLVNSGDACDHGRKEVGLPSQVAKFSKKITAIPRQRKSKFTGFLDKIGLGTASSST 152

Query: 417 KSCMDIQVTEIKGLSAMNLCNINLSTSGLELESSKWMGPHVKMSLPSYSGRTKYNSDLLK 238
           KSCMD+ VTE    S  ++CNINL+  G++ +  KW GP +KMSLPS+SGRT+YN  LLK
Sbjct: 153 KSCMDVLVTETNDRSTTDICNINLTAVGMKFD--KWKGPAIKMSLPSFSGRTEYNPSLLK 210

Query: 237 YSCDIECR 214
           YSC+IECR
Sbjct: 211 YSCNIECR 218


>ref|XP_002299341.1| predicted protein [Populus trichocarpa] gi|222846599|gb|EEE84146.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score =  158 bits (400), Expect = 2e-36
 Identities = 80/131 (61%), Positives = 97/131 (74%), Gaps = 4/131 (3%)
 Frame = -1

Query: 594 WAARVLVNSDEACNHGRKDIGLPSQVARFSKTF---RAIPRTPKSKTSAFLDKCGM-FAS 427
           WAARVLVNS +AC+HGRKD+GLPSQVA+FSK      AIPR  KSK + FLD  G+  AS
Sbjct: 93  WAARVLVNSGDACDHGRKDVGLPSQVAKFSKVIFKITAIPRRRKSKFNGFLDMIGLGTAS 152

Query: 426 DGPKSCMDIQVTEIKGLSAMNLCNINLSTSGLELESSKWMGPHVKMSLPSYSGRTKYNSD 247
              K CMD+ VTE  G SA ++CNI L+TS   ++  KW GP +KMSLPS+SGRT+YN +
Sbjct: 153 SSTKDCMDVLVTETNGPSATDICNIKLTTSVPGVKFDKWKGPAIKMSLPSFSGRTEYNPN 212

Query: 246 LLKYSCDIECR 214
           LLKY+C IECR
Sbjct: 213 LLKYTCSIECR 223


>ref|XP_002512657.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548618|gb|EEF50109.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 837

 Score =  151 bits (382), Expect = 3e-34
 Identities = 77/128 (60%), Positives = 95/128 (74%), Gaps = 1/128 (0%)
 Frame = -1

Query: 594 WAARVLVNSDEACNHGRKDIGLPSQVARFSKTFRAIPRTPKSKTSAFLDKCGM-FASDGP 418
           WAARVLV+SD+AC+HGRK++GLPS VARFSK    I R   SK + FLD  G+  A   P
Sbjct: 624 WAARVLVSSDDACDHGRKEVGLPSHVARFSKRNATIARQRTSKYNHFLDPFGLGTALSRP 683

Query: 417 KSCMDIQVTEIKGLSAMNLCNINLSTSGLELESSKWMGPHVKMSLPSYSGRTKYNSDLLK 238
              MD+QVTEI G S  N+CNINL+T+   +   KWMGP +KMSLPS+SGRT++N +LLK
Sbjct: 684 DDRMDVQVTEINGASTTNICNINLATA---VPGIKWMGPAIKMSLPSFSGRTEHNPNLLK 740

Query: 237 YSCDIECR 214
           YSC+IECR
Sbjct: 741 YSCNIECR 748


Top