BLASTX nr result

ID: Cephaelis21_contig00005612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005612
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135834.1| PREDICTED: probable histone H2A variant 3-li...   224   1e-56
ref|XP_002285266.1| PREDICTED: probable histone H2A variant 3 [V...   223   3e-56
ref|XP_002517561.1| histone h2a, putative [Ricinus communis] gi|...   222   6e-56
ref|NP_001237008.1| uncharacterized protein LOC100306322 [Glycin...   221   1e-55
ref|XP_002284738.1| PREDICTED: probable histone H2A variant 3 [V...   221   1e-55

>ref|XP_004135834.1| PREDICTED: probable histone H2A variant 3-like [Cucumis sativus]
           gi|449519192|ref|XP_004166619.1| PREDICTED: probable
           histone H2A variant 3-like [Cucumis sativus]
          Length = 134

 Score =  224 bits (572), Expect = 1e-56
 Identities = 121/134 (90%), Positives = 123/134 (91%), Gaps = 3/134 (2%)
 Frame = -2

Query: 617 MSGKGAKGLITGKL---NXXXXXXKPVSRSSRAGLQFPVGRVHRQLKTRVSANGRVGATA 447
           MSGKGAKGLI GK    N      KPVSRSSRAGLQFPVGRVHRQLK+RV+ANGRVGATA
Sbjct: 1   MSGKGAKGLIMGKSAANNKDKDKKKPVSRSSRAGLQFPVGRVHRQLKSRVAANGRVGATA 60

Query: 446 AVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVI 267
           AVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVI
Sbjct: 61  AVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVI 120

Query: 266 PHIHKSLINKSSKE 225
           PHIHKSLINKSSKE
Sbjct: 121 PHIHKSLINKSSKE 134


>ref|XP_002285266.1| PREDICTED: probable histone H2A variant 3 [Vitis vinifera]
           gi|147787162|emb|CAN64650.1| hypothetical protein
           VITISV_002812 [Vitis vinifera]
           gi|297743375|emb|CBI36242.3| unnamed protein product
           [Vitis vinifera]
          Length = 136

 Score =  223 bits (569), Expect = 3e-56
 Identities = 121/136 (88%), Positives = 122/136 (89%), Gaps = 5/136 (3%)
 Frame = -2

Query: 617 MSGKGAKGLITGKL-----NXXXXXXKPVSRSSRAGLQFPVGRVHRQLKTRVSANGRVGA 453
           MSGKGAKGLI GK      N      KP+SRSSRAGLQFPVGRVHR LKTRVSANGRVGA
Sbjct: 1   MSGKGAKGLIMGKSSTLNGNKDKDKKKPISRSSRAGLQFPVGRVHRLLKTRVSANGRVGA 60

Query: 452 TAAVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG 273
           TAAVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG
Sbjct: 61  TAAVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG 120

Query: 272 VIPHIHKSLINKSSKE 225
           VIPHIHKSLINKSSKE
Sbjct: 121 VIPHIHKSLINKSSKE 136


>ref|XP_002517561.1| histone h2a, putative [Ricinus communis]
           gi|223543193|gb|EEF44725.1| histone h2a, putative
           [Ricinus communis]
          Length = 135

 Score =  222 bits (566), Expect = 6e-56
 Identities = 123/135 (91%), Positives = 123/135 (91%), Gaps = 4/135 (2%)
 Frame = -2

Query: 617 MSGKGAKGLIT-GKL---NXXXXXXKPVSRSSRAGLQFPVGRVHRQLKTRVSANGRVGAT 450
           MSGKGAKGLIT GK    N      KPVSRSSRAGLQFPVGRVHR LKTRVSANGRVGAT
Sbjct: 1   MSGKGAKGLITAGKSTLNNKDKDKKKPVSRSSRAGLQFPVGRVHRLLKTRVSANGRVGAT 60

Query: 449 AAVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGV 270
           AAVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGV
Sbjct: 61  AAVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGV 120

Query: 269 IPHIHKSLINKSSKE 225
           IPHIHKSLINKSSKE
Sbjct: 121 IPHIHKSLINKSSKE 135


>ref|NP_001237008.1| uncharacterized protein LOC100306322 [Glycine max]
           gi|255628199|gb|ACU14444.1| unknown [Glycine max]
          Length = 136

 Score =  221 bits (563), Expect = 1e-55
 Identities = 118/136 (86%), Positives = 122/136 (89%), Gaps = 5/136 (3%)
 Frame = -2

Query: 617 MSGKGAKGLITGKLNXXXXXXK-----PVSRSSRAGLQFPVGRVHRQLKTRVSANGRVGA 453
           MSGKGAKGLITGK +            PVSRSSRAGLQFPVGR+HR LK+RVSANGRVGA
Sbjct: 1   MSGKGAKGLITGKTSASAKDKDKDKKKPVSRSSRAGLQFPVGRIHRLLKSRVSANGRVGA 60

Query: 452 TAAVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG 273
           TAAVY+AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG
Sbjct: 61  TAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG 120

Query: 272 VIPHIHKSLINKSSKE 225
           VIPHIHKSLINKSSKE
Sbjct: 121 VIPHIHKSLINKSSKE 136


>ref|XP_002284738.1| PREDICTED: probable histone H2A variant 3 [Vitis vinifera]
           gi|296081964|emb|CBI20969.3| unnamed protein product
           [Vitis vinifera]
          Length = 134

 Score =  221 bits (563), Expect = 1e-55
 Identities = 118/134 (88%), Positives = 123/134 (91%), Gaps = 3/134 (2%)
 Frame = -2

Query: 617 MSGKGAKGLITGK---LNXXXXXXKPVSRSSRAGLQFPVGRVHRQLKTRVSANGRVGATA 447
           MSGKGAKGLI GK   LN      KPVSRSSRAGLQFPVGR+HR LK+RV+ANGRVGATA
Sbjct: 1   MSGKGAKGLIMGKSPALNKDKDKKKPVSRSSRAGLQFPVGRIHRLLKSRVTANGRVGATA 60

Query: 446 AVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVI 267
           AVY+AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVI
Sbjct: 61  AVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVI 120

Query: 266 PHIHKSLINKSSKE 225
           PHIHKSLINKSSK+
Sbjct: 121 PHIHKSLINKSSKD 134


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