BLASTX nr result

ID: Cephaelis21_contig00005493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005493
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511795.1| peroxisomal biogenesis factor, putative [Ric...   222   3e-56
ref|NP_001234463.1| uncharacterized protein LOC543655 [Solanum l...   218   5e-55
ref|NP_001235755.1| peroxisomal biogenesis factor 11 family prot...   217   7e-55
ref|XP_002889352.1| peroxisomal biogenesis factor 11 family prot...   215   3e-54
ref|NP_563636.1| peroxisomal membrane protein 11C [Arabidopsis t...   213   1e-53

>ref|XP_002511795.1| peroxisomal biogenesis factor, putative [Ricinus communis]
           gi|223548975|gb|EEF50464.1| peroxisomal biogenesis
           factor, putative [Ricinus communis]
          Length = 235

 Score =  222 bits (565), Expect = 3e-56
 Identities = 106/125 (84%), Positives = 122/125 (97%)
 Frame = +3

Query: 12  GTPLPIILLGKSKNALLSSFLLLDQIVWLGRTGIYKNKERTELIGRISLYCWLGSSICTT 191
           GTPLP++LLGKSKNALLS+FL LDQIVWLGR+GIYKNKER +LIGRISLYCW+GSS+CTT
Sbjct: 79  GTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERADLIGRISLYCWMGSSVCTT 138

Query: 192 LVELGELGRLSASVKKLERELKNTDKYKNEQYRAKLQKSNDRSLALIKAGMDIIVAVGLL 371
           LVE+GELGRLSAS+KKLE+ELKN+DK++NEQYRAKLQKSN+RSLAL+KA MDI+VAVGLL
Sbjct: 139 LVEIGELGRLSASLKKLEKELKNSDKHQNEQYRAKLQKSNERSLALVKAAMDIVVAVGLL 198

Query: 372 QLAPK 386
           QLAPK
Sbjct: 199 QLAPK 203


>ref|NP_001234463.1| uncharacterized protein LOC543655 [Solanum lycopersicum]
           gi|8489788|gb|AAF75750.1|AF261140_1 unknown [Solanum
           lycopersicum]
          Length = 235

 Score =  218 bits (554), Expect = 5e-55
 Identities = 106/127 (83%), Positives = 120/127 (94%)
 Frame = +3

Query: 6   APGTPLPIILLGKSKNALLSSFLLLDQIVWLGRTGIYKNKERTELIGRISLYCWLGSSIC 185
           APGTPLP+ILLGKSKNALLS++L LDQ VWLGR+GIYKNKE+TELIGRIS + W+GSSIC
Sbjct: 77  APGTPLPLILLGKSKNALLSTYLFLDQFVWLGRSGIYKNKEQTELIGRISFFSWMGSSIC 136

Query: 186 TTLVELGELGRLSASVKKLERELKNTDKYKNEQYRAKLQKSNDRSLALIKAGMDIIVAVG 365
           T LVE+GELGRLS+S+KKLE+ELKNTDKY NEQYR+KLQKSN+RSLALIKAG DI+VAVG
Sbjct: 137 TALVEIGELGRLSSSMKKLEKELKNTDKYMNEQYRSKLQKSNERSLALIKAGTDIVVAVG 196

Query: 366 LLQLAPK 386
           LLQLAPK
Sbjct: 197 LLQLAPK 203


>ref|NP_001235755.1| peroxisomal biogenesis factor 11 family protein [Glycine max]
           gi|218117595|dbj|BAH03205.1| peroxisomal biogenesis
           factor 11 family protein [Glycine max]
           gi|255632590|gb|ACU16645.1| unknown [Glycine max]
          Length = 235

 Score =  217 bits (553), Expect = 7e-55
 Identities = 107/129 (82%), Positives = 121/129 (93%), Gaps = 1/129 (0%)
 Frame = +3

Query: 3   PAP-GTPLPIILLGKSKNALLSSFLLLDQIVWLGRTGIYKNKERTELIGRISLYCWLGSS 179
           P P GTPLP+ILLGKSKNALLS+FL LDQ VWLGRTGIY+NKERTELIGRISLYCWLGSS
Sbjct: 75  PTPQGTPLPLILLGKSKNALLSTFLFLDQFVWLGRTGIYQNKERTELIGRISLYCWLGSS 134

Query: 180 ICTTLVELGELGRLSASVKKLERELKNTDKYKNEQYRAKLQKSNDRSLALIKAGMDIIVA 359
           +CTTLVELGELGRLS+S+KKLE++LKN +KY NEQYRAKL KSN+R+L+LIKAG+D +VA
Sbjct: 135 VCTTLVELGELGRLSSSMKKLEKDLKNKNKYDNEQYRAKLNKSNERTLSLIKAGIDTVVA 194

Query: 360 VGLLQLAPK 386
           VGLLQLAPK
Sbjct: 195 VGLLQLAPK 203


>ref|XP_002889352.1| peroxisomal biogenesis factor 11 family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297335194|gb|EFH65611.1| peroxisomal
           biogenesis factor 11 family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 235

 Score =  215 bits (547), Expect = 3e-54
 Identities = 103/129 (79%), Positives = 122/129 (94%), Gaps = 1/129 (0%)
 Frame = +3

Query: 3   PAP-GTPLPIILLGKSKNALLSSFLLLDQIVWLGRTGIYKNKERTELIGRISLYCWLGSS 179
           P P GTPLP++LLGKSKNALLS+FL LDQIVWLGRTGIYK+KER EL+GRISL+CW+GSS
Sbjct: 75  PVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRTGIYKDKERAELLGRISLFCWMGSS 134

Query: 180 ICTTLVELGELGRLSASVKKLERELKNTDKYKNEQYRAKLQKSNDRSLALIKAGMDIIVA 359
           +CT+LVE+GELGRLSAS+KKLE+E+ N DK++NEQYRAKL+KSN+RSLALIKAGMD++VA
Sbjct: 135 VCTSLVEVGELGRLSASIKKLEKEIGNKDKHQNEQYRAKLEKSNERSLALIKAGMDVVVA 194

Query: 360 VGLLQLAPK 386
            GLLQLAPK
Sbjct: 195 FGLLQLAPK 203


>ref|NP_563636.1| peroxisomal membrane protein 11C [Arabidopsis thaliana]
           gi|75180079|sp|Q9LQ73.1|PX11C_ARATH RecName:
           Full=Peroxisomal membrane protein 11C; AltName:
           Full=Peroxin-11C; Short=AtPEX11c
           gi|8671852|gb|AAF78415.1|AC009273_21 Contains similarity
           to an unknown protein F4I18.28 gi|7486466 from
           Arabidopsis thaliana BAC F4I18 gb|AC004665. ESTs
           gb|F14309, gb|AI998750, gb|995247, gb|T14224 and
           gb|AI995247 come from this gene [Arabidopsis thaliana]
           gi|12083290|gb|AAG48804.1|AF332441_1 unknown protein
           [Arabidopsis thaliana] gi|17381255|gb|AAL36046.1|
           At1g01820/T1N6_18 [Arabidopsis thaliana]
           gi|20453367|gb|AAM19922.1| At1g01820/T1N6_18
           [Arabidopsis thaliana] gi|21555588|gb|AAM63892.1|
           unknown [Arabidopsis thaliana]
           gi|57157092|dbj|BAD83578.1| unnamed protein product
           [Arabidopsis thaliana] gi|332189218|gb|AEE27339.1|
           peroxisomal membrane protein 11C [Arabidopsis thaliana]
          Length = 235

 Score =  213 bits (542), Expect = 1e-53
 Identities = 101/129 (78%), Positives = 122/129 (94%), Gaps = 1/129 (0%)
 Frame = +3

Query: 3   PAP-GTPLPIILLGKSKNALLSSFLLLDQIVWLGRTGIYKNKERTELIGRISLYCWLGSS 179
           P P GTPLP++LLGKSKNALLS+FL LDQIVWLGRTGIYK+KER E++GRISL+CW+GSS
Sbjct: 75  PVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRTGIYKDKERAEILGRISLFCWMGSS 134

Query: 180 ICTTLVELGELGRLSASVKKLERELKNTDKYKNEQYRAKLQKSNDRSLALIKAGMDIIVA 359
           +CT+LVE+GELGRLSAS+KKLE+E+ N DK++NEQYRAK++KSN+RSLALIKAGMD++VA
Sbjct: 135 VCTSLVEVGELGRLSASIKKLEKEIGNKDKHQNEQYRAKVEKSNERSLALIKAGMDVVVA 194

Query: 360 VGLLQLAPK 386
            GLLQLAPK
Sbjct: 195 FGLLQLAPK 203


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