BLASTX nr result

ID: Cephaelis21_contig00005467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005467
         (1240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516232.1| groes chaperonin, putative [Ricinus communis...   361   3e-99
ref|XP_002326137.1| predicted protein [Populus trichocarpa] gi|1...   356   4e-98
ref|XP_002324138.1| predicted protein [Populus trichocarpa] gi|2...   362   1e-97
ref|XP_002276749.1| PREDICTED: 20 kDa chaperonin, chloroplastic ...   361   2e-97
gb|ABK96728.1| unknown [Populus trichocarpa x Populus deltoides]      355   3e-97

>ref|XP_002516232.1| groes chaperonin, putative [Ricinus communis]
           gi|223544718|gb|EEF46234.1| groes chaperonin, putative
           [Ricinus communis]
          Length = 253

 Score =  361 bits (926), Expect(2) = 3e-99
 Identities = 179/207 (86%), Positives = 200/207 (96%)
 Frame = +3

Query: 324 LVVKAATVVAPKYTSLRPLGDRVLVKIKVPEEKTVGGILLPSAAQTKPQGGEVVAVGEGR 503
           LVVKAATVVAPKYTS++PLGDRVL+KIKV EEKT GGILLP++AQTKPQGGEVVAVGEGR
Sbjct: 47  LVVKAATVVAPKYTSIKPLGDRVLLKIKVAEEKTDGGILLPTSAQTKPQGGEVVAVGEGR 106

Query: 504 TIGKTKVEISLKTGTQIVYSKYAGTEVEFDGSSHLILKEDDIVGILDTDDVKDMKPLNDR 683
           TIGK K++IS+KTG Q+VYSKYAGTEVEF+GSSHLILKEDDIVG+L+TDD+KD+KPLNDR
Sbjct: 107 TIGKNKLDISVKTGAQVVYSKYAGTEVEFNGSSHLILKEDDIVGVLETDDIKDLKPLNDR 166

Query: 684 VLIKIAEAEEITAGGLLLTEASKEKPSIGTVVAVGPGPLDEEGNRKPLSVSPGNTVLYSK 863
           V IKIA+AEE TAGGLLLTEA+KEKPSIGTV+AVGPG LDEEGNR+PLSVSPGN+VLYSK
Sbjct: 167 VFIKIADAEEKTAGGLLLTEATKEKPSIGTVIAVGPGTLDEEGNRRPLSVSPGNSVLYSK 226

Query: 864 YAGNDFKGSDGSNYIALRASDVMAILS 944
           YAGNDFKGSDG+NYIALRASDVMA+LS
Sbjct: 227 YAGNDFKGSDGTNYIALRASDVMAVLS 253



 Score = 28.9 bits (63), Expect(2) = 3e-99
 Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
 Frame = +2

Query: 143 MATTQLTASTIS-AAKCFVSFDGLR 214
           MAT QLTAS++S +A+   SF+GLR
Sbjct: 1   MATAQLTASSVSLSARNLTSFEGLR 25


>ref|XP_002326137.1| predicted protein [Populus trichocarpa] gi|118488687|gb|ABK96154.1|
           unknown [Populus trichocarpa]
           gi|222833330|gb|EEE71807.1| predicted protein [Populus
           trichocarpa]
          Length = 256

 Score =  356 bits (913), Expect(2) = 4e-98
 Identities = 177/207 (85%), Positives = 198/207 (95%)
 Frame = +3

Query: 324 LVVKAATVVAPKYTSLRPLGDRVLVKIKVPEEKTVGGILLPSAAQTKPQGGEVVAVGEGR 503
           LVVKAATVVAPKYTS++PLGDRVLVKIK  EEK+ GGILLPS+AQTKPQ GEVVAVGEG+
Sbjct: 50  LVVKAATVVAPKYTSIKPLGDRVLVKIKTVEEKSEGGILLPSSAQTKPQAGEVVAVGEGK 109

Query: 504 TIGKTKVEISLKTGTQIVYSKYAGTEVEFDGSSHLILKEDDIVGILDTDDVKDMKPLNDR 683
           +IGKTK++IS+KTG ++VYSKYAGTEVEFDGSSHLILKEDDI+GIL+TDD+KD+KPLNDR
Sbjct: 110 SIGKTKLDISVKTGARVVYSKYAGTEVEFDGSSHLILKEDDIIGILETDDIKDLKPLNDR 169

Query: 684 VLIKIAEAEEITAGGLLLTEASKEKPSIGTVVAVGPGPLDEEGNRKPLSVSPGNTVLYSK 863
           V IK+AEAEE TAGGLLLTEA+KEKPSIGTV+AVGPGPLDEEGNRK L VSPG+TVLYSK
Sbjct: 170 VFIKLAEAEEKTAGGLLLTEATKEKPSIGTVIAVGPGPLDEEGNRKALPVSPGSTVLYSK 229

Query: 864 YAGNDFKGSDGSNYIALRASDVMAILS 944
           YAGNDFKGSDG+NYIAL+ASDVMAILS
Sbjct: 230 YAGNDFKGSDGANYIALKASDVMAILS 256



 Score = 30.0 bits (66), Expect(2) = 4e-98
 Identities = 17/26 (65%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
 Frame = +2

Query: 143 MATTQLTASTIS-AAKCFVSFDGLRA 217
           MAT QLTAS+IS +A+   SF+GLRA
Sbjct: 1   MATAQLTASSISVSARNLSSFEGLRA 26


>ref|XP_002324138.1| predicted protein [Populus trichocarpa] gi|222865572|gb|EEF02703.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  362 bits (929), Expect = 1e-97
 Identities = 182/208 (87%), Positives = 198/208 (95%)
 Frame = +3

Query: 321 GLVVKAATVVAPKYTSLRPLGDRVLVKIKVPEEKTVGGILLPSAAQTKPQGGEVVAVGEG 500
           GLVVKAATVVAPKYTS+ PLGDRVLVKIK  EEKT  GILLPS+AQ+KPQGGEVVAVGEG
Sbjct: 51  GLVVKAATVVAPKYTSITPLGDRVLVKIKTVEEKTESGILLPSSAQSKPQGGEVVAVGEG 110

Query: 501 RTIGKTKVEISLKTGTQIVYSKYAGTEVEFDGSSHLILKEDDIVGILDTDDVKDMKPLND 680
           +TIGK K++IS+KTGTQ+VYSKYAGTEVEFDGSSHLILKEDDIVGIL+TDD+KD+KPLND
Sbjct: 111 KTIGKAKLDISVKTGTQVVYSKYAGTEVEFDGSSHLILKEDDIVGILETDDIKDLKPLND 170

Query: 681 RVLIKIAEAEEITAGGLLLTEASKEKPSIGTVVAVGPGPLDEEGNRKPLSVSPGNTVLYS 860
           RV IK+AEAEE TAGGLLLTEA+KEKPSIGTV+A+GPGPLDEEGNRK LSVSPGNTVLYS
Sbjct: 171 RVFIKVAEAEEKTAGGLLLTEATKEKPSIGTVIAIGPGPLDEEGNRKALSVSPGNTVLYS 230

Query: 861 KYAGNDFKGSDGSNYIALRASDVMAILS 944
           KYAGNDFKGSDG+ YIALRASDVMAILS
Sbjct: 231 KYAGNDFKGSDGAIYIALRASDVMAILS 258


>ref|XP_002276749.1| PREDICTED: 20 kDa chaperonin, chloroplastic [Vitis vinifera]
           gi|50660327|gb|AAT80888.1| chloroplast chaperonin 21
           [Vitis vinifera] gi|297738526|emb|CBI27771.3| unnamed
           protein product [Vitis vinifera]
          Length = 251

 Score =  361 bits (927), Expect = 2e-97
 Identities = 180/207 (86%), Positives = 198/207 (95%)
 Frame = +3

Query: 324 LVVKAATVVAPKYTSLRPLGDRVLVKIKVPEEKTVGGILLPSAAQTKPQGGEVVAVGEGR 503
           LVV+AATVV PKYTSL+PLGDRVLVKIK  EEKTVGGILLP+ AQTKPQGGEVVAVGEG+
Sbjct: 45  LVVRAATVVTPKYTSLKPLGDRVLVKIKTAEEKTVGGILLPTTAQTKPQGGEVVAVGEGK 104

Query: 504 TIGKTKVEISLKTGTQIVYSKYAGTEVEFDGSSHLILKEDDIVGILDTDDVKDMKPLNDR 683
           TIGK K++I +KTG Q+VYSKYAGTEVEF+GS+HLILKEDDIVGIL+TDDVKD+KPLNDR
Sbjct: 105 TIGKNKLDICVKTGAQVVYSKYAGTEVEFNGSNHLILKEDDIVGILETDDVKDLKPLNDR 164

Query: 684 VLIKIAEAEEITAGGLLLTEASKEKPSIGTVVAVGPGPLDEEGNRKPLSVSPGNTVLYSK 863
           VLIK+AEAEE TAGGLLLTEASKEKPSIGTVVAVGPGPLDE+G RKPLSVSPGNTVLYSK
Sbjct: 165 VLIKVAEAEEKTAGGLLLTEASKEKPSIGTVVAVGPGPLDEDGKRKPLSVSPGNTVLYSK 224

Query: 864 YAGNDFKGSDGSNYIALRASDVMAILS 944
           YAGNDFKGSDGS+YIAL+ASD+MA+LS
Sbjct: 225 YAGNDFKGSDGSDYIALKASDIMAVLS 251


>gb|ABK96728.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 256

 Score =  355 bits (912), Expect(2) = 3e-97
 Identities = 177/207 (85%), Positives = 198/207 (95%)
 Frame = +3

Query: 324 LVVKAATVVAPKYTSLRPLGDRVLVKIKVPEEKTVGGILLPSAAQTKPQGGEVVAVGEGR 503
           LVVKAATVVAPKYTS++PLGDRVLVKIK  EEK+ GGILLPS+AQTKPQ GEVVAVGEG+
Sbjct: 50  LVVKAATVVAPKYTSIKPLGDRVLVKIKTVEEKSEGGILLPSSAQTKPQAGEVVAVGEGK 109

Query: 504 TIGKTKVEISLKTGTQIVYSKYAGTEVEFDGSSHLILKEDDIVGILDTDDVKDMKPLNDR 683
           + GKTK++IS+KTG ++VYSKYAGTEVEFDGSSHLILKEDDI+GIL+TDD++D+KPLNDR
Sbjct: 110 STGKTKLDISVKTGARVVYSKYAGTEVEFDGSSHLILKEDDIIGILETDDIRDLKPLNDR 169

Query: 684 VLIKIAEAEEITAGGLLLTEASKEKPSIGTVVAVGPGPLDEEGNRKPLSVSPGNTVLYSK 863
           V IKIAEAEE TAGGLLLTEA+KEKPSIGTV+AVGPGPLDEEGNRK LSVSPG+TVLYSK
Sbjct: 170 VFIKIAEAEEKTAGGLLLTEATKEKPSIGTVIAVGPGPLDEEGNRKALSVSPGSTVLYSK 229

Query: 864 YAGNDFKGSDGSNYIALRASDVMAILS 944
           YAGNDFKGSDG+NYIAL+ASDVMAILS
Sbjct: 230 YAGNDFKGSDGANYIALKASDVMAILS 256



 Score = 27.7 bits (60), Expect(2) = 3e-97
 Identities = 16/26 (61%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
 Frame = +2

Query: 143 MATTQLTASTIS-AAKCFVSFDGLRA 217
           MAT QLTAS+IS +A+   S +GLRA
Sbjct: 1   MATAQLTASSISVSARNLSSLEGLRA 26


Top