BLASTX nr result

ID: Cephaelis21_contig00005417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005417
         (2894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein C...   470   e-129
ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein C...   466   e-128
gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 pr...   466   e-128
gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotia...   466   e-128
sp|P27524.1|CB4A_SOLLC RecName: Full=Chlorophyll a-b binding pro...   464   e-128

>ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
            [Vitis vinifera] gi|147804704|emb|CAN71620.1|
            hypothetical protein VITISV_015544 [Vitis vinifera]
          Length = 257

 Score =  470 bits (1209), Expect = e-129
 Identities = 222/257 (86%), Positives = 241/257 (93%)
 Frame = +2

Query: 536  MAATSAAVLNGLGSPFFTGGKKSQALLTLPVSSKVGGAAVAPKRFVVVAALPPKKSWLPG 715
            MAATSAAVLNGLGSPF TGGK+SQ+LL+  V++K G A  AP+R +VVAA P KKSWLPG
Sbjct: 1    MAATSAAVLNGLGSPFLTGGKRSQSLLSAGVAAKAGAAVPAPRRLIVVAAAP-KKSWLPG 59

Query: 716  VRGGGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMIAVVGIFVGQ 895
            V+ GGN VDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAM AVVGIFVGQ
Sbjct: 60   VKAGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ 119

Query: 896  AWSGVPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSR 1075
            AWSG+PWFEAGA PGA+APFSFG+LLGTQLLLMGWVESKRWVDFFNP+SQSVEWATPWSR
Sbjct: 120  AWSGIPWFEAGAAPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSR 179

Query: 1076 TAENFANATGEQGYPGGKFFDPLGLAGTLKNGVYIPDNEKLDRLKVAEIKHARLAMVAML 1255
            TAENFANATGEQGYPGGKFFDPL LAGT+K+GVYIPD EKL+RLK+AEIKHAR+AM+AML
Sbjct: 180  TAENFANATGEQGYPGGKFFDPLSLAGTIKDGVYIPDVEKLERLKLAEIKHARIAMLAML 239

Query: 1256 IFYFEAGQGKTPLGAIG 1306
            IFYFEAGQGKTPLGA+G
Sbjct: 240  IFYFEAGQGKTPLGALG 256


>ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
            [Glycine max]
          Length = 261

 Score =  466 bits (1200), Expect = e-128
 Identities = 220/258 (85%), Positives = 237/258 (91%), Gaps = 2/258 (0%)
 Frame = +2

Query: 539  AATSAAVLNGLGSPFFTGGKKSQALLTLPVSSKVGGAAV--APKRFVVVAALPPKKSWLP 712
            AATS AVLNGLGS F +GG +SQ LL   +  KVG AAV  +P+R +VVAA  PKKSWLP
Sbjct: 3    AATSGAVLNGLGSSFLSGGNRSQTLLATAIGGKVGAAAVTVSPRRLIVVAAAAPKKSWLP 62

Query: 713  GVRGGGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMIAVVGIFVG 892
            GVRGGGN VDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAM AV+GIFVG
Sbjct: 63   GVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVG 122

Query: 893  QAWSGVPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWS 1072
            QAWSGVPWFEAGADP AIAPFSFG+LLGTQL+LMGWVESKRWVDFFNPDSQSVEWATPWS
Sbjct: 123  QAWSGVPWFEAGADPNAIAPFSFGTLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWS 182

Query: 1073 RTAENFANATGEQGYPGGKFFDPLGLAGTLKNGVYIPDNEKLDRLKVAEIKHARLAMVAM 1252
            RT+ENFANATGEQGYPGGKFFDPL LAGT+K+GVYIPD EKL+RLK+AEIKHAR+AM+AM
Sbjct: 183  RTSENFANATGEQGYPGGKFFDPLSLAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAM 242

Query: 1253 LIFYFEAGQGKTPLGAIG 1306
            LIFYFEAGQGKTPLGA+G
Sbjct: 243  LIFYFEAGQGKTPLGALG 260


>gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]
          Length = 258

 Score =  466 bits (1198), Expect = e-128
 Identities = 219/256 (85%), Positives = 236/256 (92%)
 Frame = +2

Query: 539  AATSAAVLNGLGSPFFTGGKKSQALLTLPVSSKVGGAAVAPKRFVVVAALPPKKSWLPGV 718
            AATS AVLNGLGS F +GG +SQ LL   +  KVG  AV+P+R +VVAA  PKKSW+PGV
Sbjct: 3    AATSGAVLNGLGSSFLSGGSRSQTLLATSIGGKVG-VAVSPRRLIVVAAAAPKKSWIPGV 61

Query: 719  RGGGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMIAVVGIFVGQA 898
            RGGGN VDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAM AV+GIFVGQA
Sbjct: 62   RGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA 121

Query: 899  WSGVPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRT 1078
            WSGVPWFEAGADP AIAPFSFGSLLGTQL+LMGWVESKRWVDFFNPDSQSVEWATPWS+T
Sbjct: 122  WSGVPWFEAGADPNAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWSKT 181

Query: 1079 AENFANATGEQGYPGGKFFDPLGLAGTLKNGVYIPDNEKLDRLKVAEIKHARLAMVAMLI 1258
            AENFANATGEQGYPGGKFFDPLG AGTLK+GVYIPD EKL+RLK+AEIKHAR+AM+AMLI
Sbjct: 182  AENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLI 241

Query: 1259 FYFEAGQGKTPLGAIG 1306
            FYFEAGQGKTPLGA+G
Sbjct: 242  FYFEAGQGKTPLGALG 257


>gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotiana tabacum]
          Length = 257

 Score =  466 bits (1198), Expect = e-128
 Identities = 220/257 (85%), Positives = 237/257 (92%)
 Frame = +2

Query: 536  MAATSAAVLNGLGSPFFTGGKKSQALLTLPVSSKVGGAAVAPKRFVVVAALPPKKSWLPG 715
            MA TSAAVLNGL S F TGGK SQALL  PV++++GG A  PKR +V AA  PKKSW+P 
Sbjct: 1    MATTSAAVLNGLSSSFLTGGKNSQALLGAPVAARIGGLAT-PKRCIVAAAAAPKKSWIPA 59

Query: 716  VRGGGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMIAVVGIFVGQ 895
            V+GGGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAM AV+GIFVGQ
Sbjct: 60   VKGGGNLLDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQ 119

Query: 896  AWSGVPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSR 1075
            AWSG+PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNP+SQSVEWATPWS+
Sbjct: 120  AWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSK 179

Query: 1076 TAENFANATGEQGYPGGKFFDPLGLAGTLKNGVYIPDNEKLDRLKVAEIKHARLAMVAML 1255
            TAENFAN TGEQGYPGGKFFDPL LAGTL++GVYIPD EKL+RLKVAEIKHARLAM+AML
Sbjct: 180  TAENFANFTGEQGYPGGKFFDPLSLAGTLQDGVYIPDTEKLERLKVAEIKHARLAMLAML 239

Query: 1256 IFYFEAGQGKTPLGAIG 1306
            IFYFEAGQGKTPLGA+G
Sbjct: 240  IFYFEAGQGKTPLGALG 256


>sp|P27524.1|CB4A_SOLLC RecName: Full=Chlorophyll a-b binding protein CP24 10A,
            chloroplastic; Short=CAB-10A; Short=LHCP; Flags:
            Precursor gi|170394|gb|AAA34143.1| a-binding protein
            [Solanum lycopersicum]
          Length = 256

 Score =  464 bits (1193), Expect = e-128
 Identities = 221/257 (85%), Positives = 237/257 (92%)
 Frame = +2

Query: 536  MAATSAAVLNGLGSPFFTGGKKSQALLTLPVSSKVGGAAVAPKRFVVVAALPPKKSWLPG 715
            MA TSAAVLNGL S F TGG KSQALL  P++++VGGAA  PKRF V+AA   KKSW+P 
Sbjct: 1    MATTSAAVLNGLSSSFLTGGNKSQALLAAPLAARVGGAAT-PKRFTVLAAAA-KKSWIPA 58

Query: 716  VRGGGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMIAVVGIFVGQ 895
            VRGGGN VDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAM AV+GIFVGQ
Sbjct: 59   VRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQ 118

Query: 896  AWSGVPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSR 1075
            AWSG+PWFEAGADPGAIAPFSFG+LLGTQL+LMGWVESKRWVDFF+PDSQSVEWATPWS+
Sbjct: 119  AWSGIPWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSK 178

Query: 1076 TAENFANATGEQGYPGGKFFDPLGLAGTLKNGVYIPDNEKLDRLKVAEIKHARLAMVAML 1255
            TAENFAN TGEQGYPGGKFFDPL LAGTL NGVY+PD EKL+RLKVAEIKHARLAM+AML
Sbjct: 179  TAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAML 238

Query: 1256 IFYFEAGQGKTPLGAIG 1306
            IFYFEAGQGKTPLGA+G
Sbjct: 239  IFYFEAGQGKTPLGALG 255


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