BLASTX nr result

ID: Cephaelis21_contig00005356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005356
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG49074.1| 30S ribosomal protein S16 [Populus alba]              119   8e-40
ref|XP_002331484.1| predicted protein [Populus trichocarpa] gi|2...   118   2e-39
ref|NP_001234444.1| 30S ribosomal protein S16 [Solanum lycopersi...   116   6e-39
ref|XP_002281553.1| PREDICTED: 30S ribosomal protein S16 [Vitis ...   115   2e-38
ref|XP_004172096.1| PREDICTED: 30S ribosomal protein S16-like [C...   114   4e-38

>dbj|BAG49074.1| 30S ribosomal protein S16 [Populus alba]
          Length = 136

 Score =  119 bits (298), Expect(2) = 8e-40
 Identities = 57/84 (67%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
 Frame = +1

Query: 109 KQMGLNFDRVKYWISVGAQPSEPVQH-LFRSGLLPPPPLATMGRKGGPRDMRPVDPMTGR 285
           K+MGLNF+RVKYW+SVGAQPSEPVQ  LFR+GLLPPPP+  MGRKGGPRD RPVDPMTGR
Sbjct: 50  KRMGLNFERVKYWLSVGAQPSEPVQRILFRAGLLPPPPMMVMGRKGGPRDTRPVDPMTGR 109

Query: 286 FLTPETSKNVNLEFDVDEDEDESA 357
           FL+PE S + + + +  +++ E+A
Sbjct: 110 FLSPEKSPS-SSQSNASKNDTEAA 132



 Score = 69.7 bits (169), Expect(2) = 8e-40
 Identities = 33/41 (80%), Positives = 35/41 (85%)
 Frame = +2

Query: 2   KPFYRVMAADSRSVHDGKHMEVLGYYNPFPGQDDGQNRWGL 124
           KPFYRVMAADSRS  DGKH+EVLGYYNP PGQD G+ R GL
Sbjct: 15  KPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGK-RMGL 54


>ref|XP_002331484.1| predicted protein [Populus trichocarpa] gi|222873562|gb|EEF10693.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  118 bits (295), Expect(2) = 2e-39
 Identities = 56/84 (66%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
 Frame = +1

Query: 109 KQMGLNFDRVKYWISVGAQPSEPVQH-LFRSGLLPPPPLATMGRKGGPRDMRPVDPMTGR 285
           K+MGLNF+RVKYW+SVGAQPSEPVQ  LFR+G+LPPPP+  MGRKGGPRD RPVDPMTGR
Sbjct: 50  KRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMMVMGRKGGPRDTRPVDPMTGR 109

Query: 286 FLTPETSKNVNLEFDVDEDEDESA 357
           FL+PE S + + + +  +++ E+A
Sbjct: 110 FLSPEKSPS-SSQSNASKNDTEAA 132



 Score = 69.7 bits (169), Expect(2) = 2e-39
 Identities = 33/41 (80%), Positives = 35/41 (85%)
 Frame = +2

Query: 2   KPFYRVMAADSRSVHDGKHMEVLGYYNPFPGQDDGQNRWGL 124
           KPFYRVMAADSRS  DGKH+EVLGYYNP PGQD G+ R GL
Sbjct: 15  KPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGK-RMGL 54


>ref|NP_001234444.1| 30S ribosomal protein S16 [Solanum lycopersicum]
           gi|190609945|dbj|BAG49073.1| 30S ribosomal protein S16
           [Solanum lycopersicum]
          Length = 132

 Score =  116 bits (290), Expect(2) = 6e-39
 Identities = 55/83 (66%), Positives = 69/83 (83%), Gaps = 3/83 (3%)
 Frame = +1

Query: 109 KQMGLNFDRVKYWISVGAQPSEPVQHL-FRSGLLPPPPLATMGRKGGPRDMRPVDPMTGR 285
           K+MGLNFDR+KYW+SVGAQPS+PVQ L FR+G+LPPPP+  MG+KGGPRD R VDPMTGR
Sbjct: 50  KRMGLNFDRLKYWLSVGAQPSDPVQRLLFRAGVLPPPPMLAMGQKGGPRDTRLVDPMTGR 109

Query: 286 FLTPETSKNV--NLEFDVDEDED 348
             TPE++K+    +  +VDED+D
Sbjct: 110 ITTPESTKSAVPTVGSEVDEDKD 132



 Score = 69.7 bits (169), Expect(2) = 6e-39
 Identities = 33/41 (80%), Positives = 35/41 (85%)
 Frame = +2

Query: 2   KPFYRVMAADSRSVHDGKHMEVLGYYNPFPGQDDGQNRWGL 124
           KPFYRVMAADSRS  DGKH+EVLGYYNP PGQD G+ R GL
Sbjct: 15  KPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGK-RMGL 54


>ref|XP_002281553.1| PREDICTED: 30S ribosomal protein S16 [Vitis vinifera]
           gi|297738652|emb|CBI27897.3| unnamed protein product
           [Vitis vinifera]
          Length = 136

 Score =  115 bits (289), Expect(2) = 2e-38
 Identities = 57/84 (67%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
 Frame = +1

Query: 109 KQMGLNFDRVKYWISVGAQPSEPVQH-LFRSGLLPPPPLATMGRKGGPRDMRPVDPMTGR 285
           K+MGLNFDRVKYW+SVGAQPS+PVQ  LFR+GLLPPPP+  MGRKGG RD RPVDP+TGR
Sbjct: 50  KRMGLNFDRVKYWLSVGAQPSDPVQQILFRAGLLPPPPMVAMGRKGGHRDTRPVDPLTGR 109

Query: 286 FLTPETSKNVNLEFDVDEDEDESA 357
            LTP    +V    D DED +E +
Sbjct: 110 ILTPNKPTDVEQPKD-DEDGNEDS 132



 Score = 68.6 bits (166), Expect(2) = 2e-38
 Identities = 32/41 (78%), Positives = 35/41 (85%)
 Frame = +2

Query: 2   KPFYRVMAADSRSVHDGKHMEVLGYYNPFPGQDDGQNRWGL 124
           +PFYRVMAADSRS  DGKH+EVLGYYNP PGQD G+ R GL
Sbjct: 15  RPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGK-RMGL 54


>ref|XP_004172096.1| PREDICTED: 30S ribosomal protein S16-like [Cucumis sativus]
          Length = 127

 Score =  114 bits (284), Expect(2) = 4e-38
 Identities = 51/64 (79%), Positives = 59/64 (92%), Gaps = 1/64 (1%)
 Frame = +1

Query: 109 KQMGLNFDRVKYWISVGAQPSEPVQH-LFRSGLLPPPPLATMGRKGGPRDMRPVDPMTGR 285
           K+MGLNF+RVKYW+SVGAQPS+PVQ  LFRSGLLPPPP+  MGRKGGPRD RPVDP++GR
Sbjct: 50  KRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDTRPVDPLSGR 109

Query: 286 FLTP 297
           F+TP
Sbjct: 110 FVTP 113



 Score = 69.3 bits (168), Expect(2) = 4e-38
 Identities = 32/41 (78%), Positives = 35/41 (85%)
 Frame = +2

Query: 2   KPFYRVMAADSRSVHDGKHMEVLGYYNPFPGQDDGQNRWGL 124
           KPFYRVMAADSRS  DGKH+E+LGYYNP PGQD G+ R GL
Sbjct: 15  KPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGK-RMGL 54


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