BLASTX nr result

ID: Cephaelis21_contig00005355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005355
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234444.1| 30S ribosomal protein S16 [Solanum lycopersi...   207   3e-51
ref|XP_002331484.1| predicted protein [Populus trichocarpa] gi|2...   207   4e-51
dbj|BAG49074.1| 30S ribosomal protein S16 [Populus alba]              207   4e-51
ref|XP_002281553.1| PREDICTED: 30S ribosomal protein S16 [Vitis ...   207   5e-51
ref|NP_200504.1| ribosomal protein S16 family protein [Arabidops...   206   8e-51

>ref|NP_001234444.1| 30S ribosomal protein S16 [Solanum lycopersicum]
           gi|190609945|dbj|BAG49073.1| 30S ribosomal protein S16
           [Solanum lycopersicum]
          Length = 132

 Score =  207 bits (528), Expect = 3e-51
 Identities = 102/131 (77%), Positives = 111/131 (84%), Gaps = 4/131 (3%)
 Frame = +3

Query: 510 MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGQKRMGLNFDRVK 689
           MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDG KRMGLNFDR+K
Sbjct: 1   MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRLK 60

Query: 690 YWLSVGAQPSEPVQRLLFRSGXXXXXXXAAMGRKGGPRDMRPVDPMTGRFLTPETSKN-- 863
           YWLSVGAQPS+PVQRLLFR+G        AMG+KGGPRD R VDPMTGR  TPE++K+  
Sbjct: 61  YWLSVGAQPSDPVQRLLFRAGVLPPPPMLAMGQKGGPRDTRLVDPMTGRITTPESTKSAV 120

Query: 864 --VNLEFDDDE 890
             V  E D+D+
Sbjct: 121 PTVGSEVDEDK 131


>ref|XP_002331484.1| predicted protein [Populus trichocarpa] gi|222873562|gb|EEF10693.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  207 bits (527), Expect = 4e-51
 Identities = 98/116 (84%), Positives = 103/116 (88%)
 Frame = +3

Query: 510 MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGQKRMGLNFDRVK 689
           MVVR+RLSRFGC NKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDG KRMGLNF+RVK
Sbjct: 1   MVVRIRLSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVK 60

Query: 690 YWLSVGAQPSEPVQRLLFRSGXXXXXXXAAMGRKGGPRDMRPVDPMTGRFLTPETS 857
           YWLSVGAQPSEPVQR+LFR+G         MGRKGGPRD RPVDPMTGRFL+PE S
Sbjct: 61  YWLSVGAQPSEPVQRILFRAGVLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKS 116


>dbj|BAG49074.1| 30S ribosomal protein S16 [Populus alba]
          Length = 136

 Score =  207 bits (527), Expect = 4e-51
 Identities = 98/116 (84%), Positives = 103/116 (88%)
 Frame = +3

Query: 510 MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGQKRMGLNFDRVK 689
           MVVR+RLSRFGC NKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDG KRMGLNF+RVK
Sbjct: 1   MVVRIRLSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVK 60

Query: 690 YWLSVGAQPSEPVQRLLFRSGXXXXXXXAAMGRKGGPRDMRPVDPMTGRFLTPETS 857
           YWLSVGAQPSEPVQR+LFR+G         MGRKGGPRD RPVDPMTGRFL+PE S
Sbjct: 61  YWLSVGAQPSEPVQRILFRAGLLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKS 116


>ref|XP_002281553.1| PREDICTED: 30S ribosomal protein S16 [Vitis vinifera]
           gi|297738652|emb|CBI27897.3| unnamed protein product
           [Vitis vinifera]
          Length = 136

 Score =  207 bits (526), Expect = 5e-51
 Identities = 98/132 (74%), Positives = 110/132 (83%)
 Frame = +3

Query: 510 MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGQKRMGLNFDRVK 689
           MVVR+RLSRFGCKN+PFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDG KRMGLNFDRVK
Sbjct: 1   MVVRIRLSRFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVK 60

Query: 690 YWLSVGAQPSEPVQRLLFRSGXXXXXXXAAMGRKGGPRDMRPVDPMTGRFLTPETSKNVN 869
           YWLSVGAQPS+PVQ++LFR+G        AMGRKGG RD RPVDP+TGR LTP    +V 
Sbjct: 61  YWLSVGAQPSDPVQQILFRAGLLPPPPMVAMGRKGGHRDTRPVDPLTGRILTPNKPTDVE 120

Query: 870 LEFDDDEVEDES 905
              DD++  ++S
Sbjct: 121 QPKDDEDGNEDS 132


>ref|NP_200504.1| ribosomal protein S16 family protein [Arabidopsis thaliana]
           gi|8777434|dbj|BAA97024.1| 30S ribosomal protein S16
           [Arabidopsis thaliana] gi|14334472|gb|AAK59434.1|
           putative 30S ribosomal protein S16 [Arabidopsis
           thaliana] gi|16323518|gb|AAL15253.1| putative 30S
           ribosomal protein S16 [Arabidopsis thaliana]
           gi|332009442|gb|AED96825.1| ribosomal protein S16 family
           protein [Arabidopsis thaliana]
          Length = 135

 Score =  206 bits (524), Expect = 8e-51
 Identities = 101/136 (74%), Positives = 112/136 (82%)
 Frame = +3

Query: 510 MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGQKRMGLNFDRVK 689
           MVVR+RLSRFGCKN+PF+RVMAADSRSPRDGKHLEVLGY+NPLPGQDG KRMGL FDR+K
Sbjct: 1   MVVRIRLSRFGCKNRPFFRVMAADSRSPRDGKHLEVLGYFNPLPGQDGGKRMGLKFDRIK 60

Query: 690 YWLSVGAQPSEPVQRLLFRSGXXXXXXXAAMGRKGGPRDMRPVDPMTGRFLTPETSKNVN 869
           YWLSVGAQPS+PVQRLLFRSG        AMGRKGG RD RPVDPMTGR++  E +K VN
Sbjct: 61  YWLSVGAQPSDPVQRLLFRSGLLPPPPMVAMGRKGGARDTRPVDPMTGRYVDAE-NKTVN 119

Query: 870 LEFDDDEVEDESAKSA 917
              +  + ED  AKSA
Sbjct: 120 ANDNQPKEEDTEAKSA 135


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