BLASTX nr result

ID: Cephaelis21_contig00005354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005354
         (1011 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234444.1| 30S ribosomal protein S16 [Solanum lycopersi...   134   3e-29
dbj|BAG49074.1| 30S ribosomal protein S16 [Populus alba]              133   8e-29
ref|XP_004172096.1| PREDICTED: 30S ribosomal protein S16-like [C...   132   1e-28
ref|XP_002863022.1| ribosomal protein S16 family protein [Arabid...   132   2e-28
ref|XP_002331484.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-28

>ref|NP_001234444.1| 30S ribosomal protein S16 [Solanum lycopersicum]
           gi|190609945|dbj|BAG49073.1| 30S ribosomal protein S16
           [Solanum lycopersicum]
          Length = 132

 Score =  134 bits (337), Expect = 3e-29
 Identities = 72/132 (54%), Positives = 88/132 (66%), Gaps = 17/132 (12%)
 Frame = +2

Query: 437 MVVRLRLSRFGCKNKPFYRVLASNSRSSS*WQAFGSSWLLQPSP---------------R 571
           MVVRLRLSRFGCKNKPFYRV+A++SRS    +         P P               +
Sbjct: 1   MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRLK 60

Query: 572 YWLSVGAQPSEPVQRLLYRSGLLPPQPFAAMGRKGGPRDMRSVDPMTGRFLTPETLKNV- 748
           YWLSVGAQPS+PVQRLL+R+G+LPP P  AMG+KGGPRD R VDPMTGR  TPE+ K+  
Sbjct: 61  YWLSVGAQPSDPVQRLLFRAGVLPPPPMLAMGQKGGPRDTRLVDPMTGRITTPESTKSAV 120

Query: 749 -DLEFDVDDAED 781
             +  +VD+ +D
Sbjct: 121 PTVGSEVDEDKD 132


>dbj|BAG49074.1| 30S ribosomal protein S16 [Populus alba]
          Length = 136

 Score =  133 bits (334), Expect = 8e-29
 Identities = 68/114 (59%), Positives = 78/114 (68%), Gaps = 15/114 (13%)
 Frame = +2

Query: 437 MVVRLRLSRFGCKNKPFYRVLASNSRSSS*WQAFGSSWLLQPSP---------------R 571
           MVVR+RLSRFGC NKPFYRV+A++SRS    +         P P               +
Sbjct: 1   MVVRIRLSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVK 60

Query: 572 YWLSVGAQPSEPVQRLLYRSGLLPPQPFAAMGRKGGPRDMRSVDPMTGRFLTPE 733
           YWLSVGAQPSEPVQR+L+R+GLLPP P   MGRKGGPRD R VDPMTGRFL+PE
Sbjct: 61  YWLSVGAQPSEPVQRILFRAGLLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPE 114


>ref|XP_004172096.1| PREDICTED: 30S ribosomal protein S16-like [Cucumis sativus]
          Length = 127

 Score =  132 bits (333), Expect = 1e-28
 Identities = 67/113 (59%), Positives = 79/113 (69%), Gaps = 15/113 (13%)
 Frame = +2

Query: 437 MVVRLRLSRFGCKNKPFYRVLASNSRSSS*WQAFGSSWLLQPSP---------------R 571
           MVVR+RLSRFGCKNKPFYRV+A++SRS    +         P P               +
Sbjct: 1   MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVK 60

Query: 572 YWLSVGAQPSEPVQRLLYRSGLLPPQPFAAMGRKGGPRDMRSVDPMTGRFLTP 730
           YWLSVGAQPS+PVQR+L+RSGLLPP P  AMGRKGGPRD R VDP++GRF+TP
Sbjct: 61  YWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDTRPVDPLSGRFVTP 113


>ref|XP_002863022.1| ribosomal protein S16 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297793207|ref|XP_002864488.1| ribosomal
           protein S16 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297308822|gb|EFH39281.1| ribosomal protein
           S16 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310323|gb|EFH40747.1| ribosomal protein S16 family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 135

 Score =  132 bits (331), Expect = 2e-28
 Identities = 72/135 (53%), Positives = 88/135 (65%), Gaps = 17/135 (12%)
 Frame = +2

Query: 437 MVVRLRLSRFGCKNKPFYRVLASNSRSSS*WQAFGSSWLLQPSP---------------R 571
           MVVR+RLSRFGCKN+PF+RV+A++SRS    +         P P               +
Sbjct: 1   MVVRIRLSRFGCKNRPFFRVMAADSRSPRDGKHLEVLGYFNPLPGQDGGKRMGLKFDRIK 60

Query: 572 YWLSVGAQPSEPVQRLLYRSGLLPPQPFAAMGRKGGPRDMRSVDPMTGRFLTPE--TLKN 745
           YWLSVGAQPS+PVQRLL+RSGLLPP P  AMGRKGG RD R VDPMTGR++  E  T+  
Sbjct: 61  YWLSVGAQPSDPVQRLLFRSGLLPPPPMVAMGRKGGARDTRPVDPMTGRYVDAENKTVNA 120

Query: 746 VDLEFDVDDAEDESA 790
            D +   +D ED+SA
Sbjct: 121 SDNQPKEEDTEDKSA 135


>ref|XP_002331484.1| predicted protein [Populus trichocarpa] gi|222873562|gb|EEF10693.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  132 bits (331), Expect = 2e-28
 Identities = 67/114 (58%), Positives = 78/114 (68%), Gaps = 15/114 (13%)
 Frame = +2

Query: 437 MVVRLRLSRFGCKNKPFYRVLASNSRSSS*WQAFGSSWLLQPSP---------------R 571
           MVVR+RLSRFGC NKPFYRV+A++SRS    +         P P               +
Sbjct: 1   MVVRIRLSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVK 60

Query: 572 YWLSVGAQPSEPVQRLLYRSGLLPPQPFAAMGRKGGPRDMRSVDPMTGRFLTPE 733
           YWLSVGAQPSEPVQR+L+R+G+LPP P   MGRKGGPRD R VDPMTGRFL+PE
Sbjct: 61  YWLSVGAQPSEPVQRILFRAGVLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPE 114


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