BLASTX nr result
ID: Cephaelis21_contig00005353
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00005353
(2788 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD43283.1| bromodomain-containing RNA-binding protein 1 [So... 605 e-170
emb|CAD43284.1| bromodomain-containing RNA-binding protein 1 [Ni... 598 e-168
ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum ly... 597 e-168
emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Ni... 591 e-166
emb|CAD43285.1| bromodomain-containing RNA-binding protein 2 [Ni... 586 e-164
>emb|CAD43283.1| bromodomain-containing RNA-binding protein 1 [Solanum tuberosum]
Length = 602
Score = 605 bits (1560), Expect = e-170
Identities = 349/579 (60%), Positives = 395/579 (68%), Gaps = 23/579 (3%)
Frame = -2
Query: 2544 MASAVLASGNESSWAQSGG---GFMGXXXXXXXXXXXXXXXXXXXXQ--FHHSANGGRNN 2380
MASAVLAS NESSWAQSGG GFMG Q FHH++NG +
Sbjct: 1 MASAVLASRNESSWAQSGGAGGGFMGKTPFSHTQLNPNHNPNPKKKQKQFHHTSNG--RH 58
Query: 2379 HDYSPAVTQTASDDAYSFNQKPT-AEINRNGFNHGGYMTYNVASYTKTELSELRKRLISE 2203
D SPAVTQTASDDAYSFNQ+P + N +G N GGY+T+NV SY K E++ELR RL++E
Sbjct: 59 IDESPAVTQTASDDAYSFNQRPIESTTNVDGLNFGGYLTFNVVSYNKGEVNELRSRLLAE 118
Query: 2202 LEQIRSLRDRIESGQFSGGXXXXXXXXXXXXXXXXXKRPIPSGSGSNKDPKRFCNGIDKX 2023
+EQIR+L+DRIESGQ S KRP PSGS +KDPK+ NG++
Sbjct: 119 VEQIRNLKDRIESGQLS---TTNPRSQGKSKKLSGNKRPTPSGS--SKDPKKLPNGVENR 173
Query: 2022 XXXXXXXXXV----DYEGWLKECRQILTKLMKHKHGWIFNTPVDAKTLGLHDYHQIVKRP 1855
E +KECRQIL KLMKHK+GWIFN PVDA+ LGLHDYHQI+KRP
Sbjct: 174 NFGNPVGGGGVKAIGTESMMKECRQILAKLMKHKNGWIFNIPVDAEALGLHDYHQIIKRP 233
Query: 1854 MDLGTVKSNLAKSSYLSPAEFAADVRLTFNNALLYNPKTDQVHGWAEMLLARFENLFRPI 1675
+DLGTVKSNLAK+ Y SP EFAADVRLTFNNALLYNPKTDQV+G+AE LL RFE++FRP+
Sbjct: 234 IDLGTVKSNLAKNFYPSPFEFAADVRLTFNNALLYNPKTDQVNGFAEQLLGRFEDMFRPL 293
Query: 1674 LDKMGS---DRREYIXXXXXXXXXXGLVEELQASSWNHIPTPERAKKPKNSPVP--KKQQ 1510
DKM RR+Y V+ELQ SSWNHIPTPER KKPK +PVP K+Q
Sbjct: 294 QDKMNKLEGGRRDYHP-----------VDELQGSSWNHIPTPERVKKPKATPVPHISKKQ 342
Query: 1509 ERMQXXXXXXXXXXXXXXXXXXXXXXP-VPTPSPMRATPVIPQQAGK-GAIGKQPKPRAK 1336
ERMQ + TPSP+RA P P+ A K A+GKQPKPRAK
Sbjct: 343 ERMQNHSSASTPSLPVPPPNPPARQQSPLSTPSPVRAPPSKPESAAKVPAMGKQPKPRAK 402
Query: 1335 DPNKREMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQEGDEIELDIEALDTETL 1156
DPNKR M+MEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQ+GDEIELDIEALDTETL
Sbjct: 403 DPNKRVMNMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETL 462
Query: 1155 WELDRFVTNWKKMVSKTKRQALMTNNNTP------AAAPSTSNAEVDGGATSERIDSAKK 994
WELDRFVTNWKKMVSKTKRQALM NN P A+A +TS AE DG TSE+ DS KK
Sbjct: 463 WELDRFVTNWKKMVSKTKRQALMINNLGPPSASAAASAATTSVAEADGPTTSEKNDSFKK 522
Query: 993 PKKGEAGXXXXXXXXDMPATSFPPVEIEKDEGVGQEHGN 877
PKKG+ G D PAT FPPVEIEKDEG G++ N
Sbjct: 523 PKKGDVGEEDVEIEDDEPATHFPPVEIEKDEGGGRDQEN 561
>emb|CAD43284.1| bromodomain-containing RNA-binding protein 1 [Nicotiana benthamiana]
Length = 615
Score = 598 bits (1541), Expect = e-168
Identities = 355/595 (59%), Positives = 395/595 (66%), Gaps = 38/595 (6%)
Frame = -2
Query: 2544 MASAVLASGNESSWAQSGG---GFMGXXXXXXXXXXXXXXXXXXXXQ--FHHSANGGRNN 2380
MASAVLAS NESSWAQSGG GFMG Q FHH++NG +N
Sbjct: 1 MASAVLASRNESSWAQSGGAGGGFMGKTPYSHTHLNPNSNPKPKKKQKQFHHASNGRQN- 59
Query: 2379 HDYSPAVTQTASDDAYSFNQKPT-AEINRNGFNHGGYMTYNVASYTKTELSELRKRLISE 2203
D SPAVTQTASDDAYSFNQ+P + N +G N GGYMTYNVASY KTEL ELR RL++E
Sbjct: 60 -DESPAVTQTASDDAYSFNQRPIESSTNVDGLNLGGYMTYNVASYNKTELHELRSRLVAE 118
Query: 2202 LEQIRSLRDRIESGQFSGGXXXXXXXXXXXXXXXXXKRPIPSGSGSNKDPKRFCNGIDKX 2023
LEQIRSL+DRIESGQ S R PSGS +KDPK+ NG+D
Sbjct: 119 LEQIRSLKDRIESGQLSTSNPRSHGKSKKLSGNK---RATPSGS--SKDPKKLPNGVDNR 173
Query: 2022 XXXXXXXXXVD----YEGWLKECRQILTKLMKHKHGWIFNTPVDAKTLGLHDYHQIVKRP 1855
V E +KECRQ+L KLMKHK GWIFNTPVDA+ LGLHDYHQI+KRP
Sbjct: 174 NFGNPGGVGVKGIIGMENMMKECRQVLGKLMKHKSGWIFNTPVDAEALGLHDYHQIIKRP 233
Query: 1854 MDLGTVKSNLAKSSYLSPAEFAADVRLTFNNALLYNPKTDQVHGWAEMLLARFENLFRPI 1675
MDLGTVKSNL+ Y +P EFAADVRLTFNNALLYNPKTDQVHG+AE LLARFE++FRPI
Sbjct: 234 MDLGTVKSNLSNCFYPTPFEFAADVRLTFNNALLYNPKTDQVHGFAEQLLARFEDMFRPI 293
Query: 1674 LDKM-----GSDRREYIXXXXXXXXXXGLVEELQASSWNHIPTPERAKKPKNSPVP---K 1519
DK+ GSDRR++ +ELQ SWNHIPTPER KKPK +P P K
Sbjct: 294 QDKLNKLDGGSDRRDFHP-----------TDELQGISWNHIPTPERVKKPKPTPAPHISK 342
Query: 1518 KQQERMQXXXXXXXXXXXXXXXXXXXXXXP--VPTPSPMRATPVIPQQAGKGA----IGK 1357
KQ+ MQ + TPSP+RA P Q+ A +GK
Sbjct: 343 KQERMMQNHSSALTLPVQQPPDNTPVVRQQSLLSTPSPVRAPPAPKPQSSVAAKVPPMGK 402
Query: 1356 QPKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQEGDEIELDIE 1177
QPKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQ+GDEIELDIE
Sbjct: 403 QPKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIE 462
Query: 1176 ALDTETLWELDRFVTNWKKMVSKTKRQALMTNNNTP-------AAAPSTSNAEVDGGATS 1018
ALDTETLWELDRFVTNWKKMVSKTKRQAL+ N P +AA +TS AE D +TS
Sbjct: 463 ALDTETLWELDRFVTNWKKMVSKTKRQALINNLGQPPSASAAASAATTTSVAEADAPSTS 522
Query: 1017 ERIDSAKKPKK-GEAG-XXXXXXXXDMPATSFPPVEIEKDE-----GVGQEHGNN 874
E+ DS KKPKK G+AG D PAT FPPVEI+KDE GVGQ+ NN
Sbjct: 523 EKNDSFKKPKKGGDAGDEDDVEIEDDEPATHFPPVEIDKDEGGGGGGVGQDRDNN 577
>ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
gi|10179602|gb|AAG13810.1|AF190891_1 PSTVd RNA-binding
protein Virp1a [Solanum lycopersicum]
gi|10179604|gb|AAG13811.1|AF190892_1 PSTVd RNA-binding
protein Virp1b [Solanum lycopersicum]
gi|10179606|gb|AAG13812.1|AF190893_1 PSTVd RNA-binding
protein Virp1c [Solanum lycopersicum]
gi|10179608|gb|AAG13813.1|AF190894_1 PSTVd RNA-binding
protein Virp1d [Solanum lycopersicum]
gi|13186132|emb|CAC33448.1| PSTVd RNA-biding protein,
Virp1 [Solanum lycopersicum] gi|13186134|emb|CAC33449.1|
PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186136|emb|CAC33450.1| PSTVd RNA-biding protein,
Virp1 [Solanum lycopersicum] gi|13186138|emb|CAC33451.1|
PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
Length = 602
Score = 597 bits (1538), Expect = e-168
Identities = 346/578 (59%), Positives = 390/578 (67%), Gaps = 22/578 (3%)
Frame = -2
Query: 2544 MASAVLASGNESSWAQSGG---GFMGXXXXXXXXXXXXXXXXXXXXQ--FHHSANGGRNN 2380
MASAVLAS NESSWAQSGG GFMG Q FHH++NG +
Sbjct: 1 MASAVLASRNESSWAQSGGAGGGFMGKTPYSHTQLNPNHNPNPKKKQKQFHHTSNG--RH 58
Query: 2379 HDYSPAVTQTASDDAYSFNQKPT-AEINRNGFNHGGYMTYNVASYTKTELSELRKRLISE 2203
D SPAVTQTASDDAYSFNQ+P + N +G N GGY+T+NV SY K E++ELR RL++E
Sbjct: 59 MDDSPAVTQTASDDAYSFNQRPIESTTNVDGLNFGGYLTFNVVSYNKAEVNELRSRLMAE 118
Query: 2202 LEQIRSLRDRIESGQFSGGXXXXXXXXXXXXXXXXXKRPIPSGSGSNKDPKRFCNGIDKX 2023
+EQIR+L+DRIESGQ S KRP PSGS +KD K+ NG++
Sbjct: 119 VEQIRNLKDRIESGQLS---TTNPRSQGKSKKQSGNKRPTPSGS--SKDLKKLPNGVENR 173
Query: 2022 XXXXXXXXXV----DYEGWLKECRQILTKLMKHKHGWIFNTPVDAKTLGLHDYHQIVKRP 1855
E +KECRQIL KLMKHK+GWIFN PVDA+ LGLHDYHQI+KRP
Sbjct: 174 NFGNPGGVDGVKAIGTESMMKECRQILAKLMKHKNGWIFNIPVDAEALGLHDYHQIIKRP 233
Query: 1854 MDLGTVKSNLAKSSYLSPAEFAADVRLTFNNALLYNPKTDQVHGWAEMLLARFENLFRPI 1675
MDLGTVKSNLAK+ Y SP EFAADVRLTFNNALLYNPKTDQV+ +AE LL RFE++FRP+
Sbjct: 234 MDLGTVKSNLAKNFYPSPFEFAADVRLTFNNALLYNPKTDQVNAFAEQLLGRFEDMFRPL 293
Query: 1674 LDKMGS---DRREYIXXXXXXXXXXGLVEELQASSWNHIPTPERAKKPKNSPVPK--KQQ 1510
DKM RR+Y V+ELQ SSWNHIPTPER KKPK +PVP K+Q
Sbjct: 294 QDKMNKLEGGRRDYHP-----------VDELQGSSWNHIPTPERVKKPKPTPVPNISKKQ 342
Query: 1509 ERMQXXXXXXXXXXXXXXXXXXXXXXP-VPTPSPMRATPVIPQQAGK-GAIGKQPKPRAK 1336
ERMQ + TPSP+RA PQ A K +GKQPKPRAK
Sbjct: 343 ERMQNHSSASTPSLPVPPPNPPARQQSPLSTPSPVRAPAAKPQSAAKVPTMGKQPKPRAK 402
Query: 1335 DPNKREMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQEGDEIELDIEALDTETL 1156
DPNKREM+MEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQ+GDEIELDIEALDTETL
Sbjct: 403 DPNKREMNMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETL 462
Query: 1155 WELDRFVTNWKKMVSKTKRQALMTNNNTP-----AAAPSTSNAEVDGGATSERIDSAKKP 991
WELDRFVTNWKKMVSKTKRQALM N P A+A +TS AE DG TSE+ DS KK
Sbjct: 463 WELDRFVTNWKKMVSKTKRQALMNNLGPPSASAAASAATTSVAEADGPTTSEKNDSFKKA 522
Query: 990 KKGEAGXXXXXXXXDMPATSFPPVEIEKDEGVGQEHGN 877
KKG+ G D PAT FPPVEIEKDEG G++ N
Sbjct: 523 KKGDVGEEDVEIEDDEPATHFPPVEIEKDEGGGRDQEN 560
>emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Nicotiana tabacum]
Length = 617
Score = 591 bits (1524), Expect = e-166
Identities = 352/597 (58%), Positives = 392/597 (65%), Gaps = 40/597 (6%)
Frame = -2
Query: 2544 MASAVLASGNESSWAQSGG---GFMGXXXXXXXXXXXXXXXXXXXXQ--FHHSANGGRNN 2380
MA AVLAS NESSWAQSGG GFMG Q FHH++NG N
Sbjct: 1 MAFAVLASRNESSWAQSGGAGGGFMGKTPYSHTHLNPNSNPNPKKKQKQFHHASNGRHN- 59
Query: 2379 HDYSPAVTQTASDDAYSFNQKPT-AEINRNGFNHGGYMTYNVASYTKTELSELRKRLISE 2203
D SPAVTQTASDDAYSFNQ+P + N +G N GGYMTYNVASY KTEL ELR RL++E
Sbjct: 60 -DESPAVTQTASDDAYSFNQRPIESSTNVDGLNLGGYMTYNVASYNKTELHELRSRLVAE 118
Query: 2202 LEQIRSLRDRIESGQFSGGXXXXXXXXXXXXXXXXXKRPIPSGSGSNKDPKRFCNGIDKX 2023
LEQIR+L+DRIESGQ S RP PSGS +KD K+ NG+D
Sbjct: 119 LEQIRNLKDRIESGQLSTSNPRSHGKSKKLSGNK---RPTPSGS--SKDRKKLLNGVDNR 173
Query: 2022 XXXXXXXXXV-----DYEGWLKECRQILTKLMKHKHGWIFNTPVDAKTLGLHDYHQIVKR 1858
E +KECRQ+L KLMKHK GWIFNTPVDAK +GLHDYHQI+KR
Sbjct: 174 NFGNPGGGGGVKGIIGMENMMKECRQVLAKLMKHKSGWIFNTPVDAKAMGLHDYHQIIKR 233
Query: 1857 PMDLGTVKSNLAKSSYLSPAEFAADVRLTFNNALLYNPKTDQVHGWAEMLLARFENLFRP 1678
PMDLGTVKSNL + Y +P EFAADVRLTFNNALLYNPKTDQVHG+AE LLARFE++FRP
Sbjct: 234 PMDLGTVKSNLINNFYPTPFEFAADVRLTFNNALLYNPKTDQVHGFAEQLLARFEDMFRP 293
Query: 1677 ILDKM-----GSDRREYIXXXXXXXXXXGLVEELQASSWNHIPTPERAKKPKNSPVP--- 1522
I DK+ G+ RR++ ++ELQ SSWNHIPTPER KKPK +P P
Sbjct: 294 IQDKLNKLDGGTGRRDF-----------RAIDELQGSSWNHIPTPERVKKPKPTPAPHIS 342
Query: 1521 KKQQERMQXXXXXXXXXXXXXXXXXXXXXXP----VPTPSPMRATPVIPQQAGKGA---- 1366
KKQ+ MQ + TPSP+RA P Q+ A
Sbjct: 343 KKQERMMQNHSSASTPSLPVQQPPDNPPVVRQQSPLSTPSPVRAPPAAKPQSSVAAKVPP 402
Query: 1365 IGKQPKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQEGDEIEL 1186
+GKQPKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQ+GDEIEL
Sbjct: 403 MGKQPKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIEL 462
Query: 1185 DIEALDTETLWELDRFVTNWKKMVSKTKRQALMTNNNTP-------AAAPSTSNAEVDGG 1027
DIEALDTETLWELDRFVTNWKKMVSKTKRQAL+ N P +AA +TS AE DG
Sbjct: 463 DIEALDTETLWELDRFVTNWKKMVSKTKRQALINNLGQPPSASAAASAATTTSVAEADGP 522
Query: 1026 ATSERIDSAKKPKK-GEAG-XXXXXXXXDMPATSFPPVEIE--KDE--GVGQEHGNN 874
+TSE+ DS KKPKK G+AG D PAT FPPVEIE KDE G GQ NN
Sbjct: 523 STSEKNDSFKKPKKGGDAGDEDDVEIEDDEPATHFPPVEIEIDKDEGGGGGQVRDNN 579
>emb|CAD43285.1| bromodomain-containing RNA-binding protein 2 [Nicotiana benthamiana]
Length = 613
Score = 586 bits (1510), Expect = e-164
Identities = 345/585 (58%), Positives = 389/585 (66%), Gaps = 34/585 (5%)
Frame = -2
Query: 2544 MASAVLASGNESSWAQSGG---GFMGXXXXXXXXXXXXXXXXXXXXQ--FHHSANGGRNN 2380
MASAVLAS NESSWAQSGG GFMG Q FHH++NG N
Sbjct: 1 MASAVLASRNESSWAQSGGAGGGFMGKTPYSHTHLNPNSNPNPKKKQKQFHHASNGCHN- 59
Query: 2379 HDYSPAVTQTASDDAYSFNQKPT-AEINRNGFNHGGYMTYNVASYTKTELSELRKRLISE 2203
D PAVTQTASDDAYSFNQ+P + N +G N GGYMTYNVASY+KTEL +LR RL++E
Sbjct: 60 -DELPAVTQTASDDAYSFNQRPIESSANVDGLNLGGYMTYNVASYSKTELHDLRSRLVAE 118
Query: 2202 LEQIRSLRDRIESGQFSGGXXXXXXXXXXXXXXXXXKRPIPSGSGSNKDPKRFCNGIDKX 2023
LEQIR+L+DRIESGQ S RP PSGS +KDPK+ NG+D
Sbjct: 119 LEQIRNLKDRIESGQLSTSNPRSHGKSKKLSGNK---RPTPSGS--SKDPKKLPNGVDNR 173
Query: 2022 XXXXXXXXXVD----YEGWLKECRQILTKLMKHKHGWIFNTPVDAKTLGLHDYHQIVKRP 1855
V E +KECRQ+L KLMKHK GWIFNTPVDA+ LGLHDY QI+KRP
Sbjct: 174 NFGNPGGGGVKGIIGMENMMKECRQVLGKLMKHKSGWIFNTPVDAEALGLHDYRQIIKRP 233
Query: 1854 MDLGTVKSNLAKSSYLSPAEFAADVRLTFNNALLYNPKTDQVHGWAEMLLARFENLFRPI 1675
MDLGTVKSNL+ + Y +P EFAADVRLTFNNALLYNPKTDQVH +AE+LL RFE++FRP
Sbjct: 234 MDLGTVKSNLSNNLYPTPFEFAADVRLTFNNALLYNPKTDQVHVFAELLLTRFEDMFRPF 293
Query: 1674 LDKM-----GSDRREYIXXXXXXXXXXGLVEELQASSWNHIPTPERAKKPKNSPVP---K 1519
DK+ GS RR++ ++ELQ SSWNHIPTPER KKPK +P P K
Sbjct: 294 QDKLNKLDGGSGRRDF-----------HAIDELQGSSWNHIPTPERVKKPKPTPAPHISK 342
Query: 1518 KQQERMQXXXXXXXXXXXXXXXXXXXXXXP----VPTPSPMRATPVIPQQAGKGA----I 1363
KQ+ MQ + TPSP+RA P Q+ A +
Sbjct: 343 KQERMMQNHSSASTPSLPVQQPPDNPPVVQQQSPLSTPSPVRAPPAAKPQSSVAAKVPPM 402
Query: 1362 GKQPKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQEGDEIELD 1183
KQPKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQ+GDEIELD
Sbjct: 403 EKQPKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELD 462
Query: 1182 IEALDTETLWELDRFVTNWKKMVSKTKRQALMTNNNTP------AAAPSTSNAEVDGGAT 1021
IEALDTETLWELDRFVTNWKKMVSKTKRQAL+ N P A+A +TS AE DG +T
Sbjct: 463 IEALDTETLWELDRFVTNWKKMVSKTKRQALINNLGQPPSASAAASAATTSVAEADGPST 522
Query: 1020 SERIDSAKKPKK-GEAG-XXXXXXXXDMPATSFPPVEIEKDEGVG 892
SE+ DS KKPKK G+AG D PAT FPPVEI+KDEG G
Sbjct: 523 SEKNDSFKKPKKGGDAGDEDDVEIEDDEPATQFPPVEIDKDEGGG 567