BLASTX nr result

ID: Cephaelis21_contig00005321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005321
         (872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313617.1| predicted protein [Populus trichocarpa] gi|2...   194   3e-47
ref|XP_002883147.1| 60S ribosomal protein L30 [Arabidopsis lyrat...   193   5e-47
ref|XP_002281037.1| PREDICTED: 60S ribosomal protein L30 [Vitis ...   193   5e-47
ref|NP_565164.1| 60S ribosomal protein L30-2 [Arabidopsis thalia...   192   6e-47
ref|XP_002889167.1| 60S ribosomal protein L30 [Arabidopsis lyrat...   192   6e-47

>ref|XP_002313617.1| predicted protein [Populus trichocarpa]
           gi|224131730|ref|XP_002328094.1| predicted protein
           [Populus trichocarpa] gi|118483895|gb|ABK93838.1|
           unknown [Populus trichocarpa]
           gi|222837609|gb|EEE75974.1| predicted protein [Populus
           trichocarpa] gi|222850025|gb|EEE87572.1| predicted
           protein [Populus trichocarpa]
          Length = 112

 Score =  194 bits (492), Expect = 3e-47
 Identities = 91/101 (90%), Positives = 99/101 (98%)
 Frame = +2

Query: 272 HENINSRLALVMKSGKYSLGYKTVLKTLRNSKGKLILISNNCPPLRKSEIEYYAMLAKVG 451
           HE+IN+RLALVMKSGKY+LGYKTVLK+LRNSKGKLI+ISNNCPPLRKSEIEYYAMLAKVG
Sbjct: 11  HESINNRLALVMKSGKYTLGYKTVLKSLRNSKGKLIIISNNCPPLRKSEIEYYAMLAKVG 70

Query: 452 VHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPSN 574
           VHHYNGNNVDLGTACGKYFRV CLSI+DPGDSDIIKS+P +
Sbjct: 71  VHHYNGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKSVPGD 111


>ref|XP_002883147.1| 60S ribosomal protein L30 [Arabidopsis lyrata subsp. lyrata]
           gi|297846666|ref|XP_002891214.1| 60S ribosomal protein
           L30 [Arabidopsis lyrata subsp. lyrata]
           gi|297328987|gb|EFH59406.1| 60S ribosomal protein L30
           [Arabidopsis lyrata subsp. lyrata]
           gi|297337056|gb|EFH67473.1| 60S ribosomal protein L30
           [Arabidopsis lyrata subsp. lyrata]
          Length = 112

 Score =  193 bits (490), Expect = 5e-47
 Identities = 92/102 (90%), Positives = 100/102 (98%)
 Frame = +2

Query: 272 HENINSRLALVMKSGKYSLGYKTVLKTLRNSKGKLILISNNCPPLRKSEIEYYAMLAKVG 451
           HE INSRLALVMKSGKY+LGYK+VLK+LR+SKGKLILIS+NCPPLR+SEIEYYAMLAKVG
Sbjct: 11  HEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLAKVG 70

Query: 452 VHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPSNQ 577
           VHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIK+LP +Q
Sbjct: 71  VHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKALPGDQ 112


>ref|XP_002281037.1| PREDICTED: 60S ribosomal protein L30 [Vitis vinifera]
           gi|296082469|emb|CBI21474.3| unnamed protein product
           [Vitis vinifera]
          Length = 112

 Score =  193 bits (490), Expect = 5e-47
 Identities = 91/101 (90%), Positives = 100/101 (99%)
 Frame = +2

Query: 272 HENINSRLALVMKSGKYSLGYKTVLKTLRNSKGKLILISNNCPPLRKSEIEYYAMLAKVG 451
           HE+IN+RLALVMKSGKY+LGYKTVLK+LR+SKGKLILISNNCPPLRKSEIEYYAMLAKVG
Sbjct: 11  HESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLILISNNCPPLRKSEIEYYAMLAKVG 70

Query: 452 VHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPSN 574
           VHH+NGNNVDLGTACGKYFRVSCLSI+DPGDSDIIK+LP +
Sbjct: 71  VHHFNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGD 111


>ref|NP_565164.1| 60S ribosomal protein L30-2 [Arabidopsis thaliana]
           gi|75161573|sp|Q8VZ19.1|RL302_ARATH RecName: Full=60S
           ribosomal protein L30-2 gi|17529170|gb|AAL38811.1|
           putative ribosomal protein L30 [Arabidopsis thaliana]
           gi|21280849|gb|AAM45084.1| putative ribosomal protein
           L30 [Arabidopsis thaliana] gi|21554013|gb|AAM63094.1|
           ribosomal protein L30, putative [Arabidopsis thaliana]
           gi|28466813|gb|AAO44015.1| At1g77940 [Arabidopsis
           thaliana] gi|110736052|dbj|BAE99998.1| similar to
           ribosomal protein L30 [Arabidopsis thaliana]
           gi|332197928|gb|AEE36049.1| 60S ribosomal protein L30-2
           [Arabidopsis thaliana]
          Length = 112

 Score =  192 bits (489), Expect = 6e-47
 Identities = 92/102 (90%), Positives = 98/102 (96%)
 Frame = +2

Query: 272 HENINSRLALVMKSGKYSLGYKTVLKTLRNSKGKLILISNNCPPLRKSEIEYYAMLAKVG 451
           HE INSRLALVMKSGKY+LGYK+VLK+LR SKGKLILIS NCPPLR+SEIEYYAMLAKVG
Sbjct: 11  HEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEIEYYAMLAKVG 70

Query: 452 VHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPSNQ 577
           VHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKS+P +Q
Sbjct: 71  VHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIPGDQ 112


>ref|XP_002889167.1| 60S ribosomal protein L30 [Arabidopsis lyrata subsp. lyrata]
           gi|297335008|gb|EFH65426.1| 60S ribosomal protein L30
           [Arabidopsis lyrata subsp. lyrata]
          Length = 112

 Score =  192 bits (489), Expect = 6e-47
 Identities = 92/102 (90%), Positives = 98/102 (96%)
 Frame = +2

Query: 272 HENINSRLALVMKSGKYSLGYKTVLKTLRNSKGKLILISNNCPPLRKSEIEYYAMLAKVG 451
           HE INSRLALVMKSGKY+LGYK+VLK+LR SKGKLILIS NCPPLR+SEIEYYAMLAKVG
Sbjct: 11  HEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEIEYYAMLAKVG 70

Query: 452 VHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPSNQ 577
           VHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKS+P +Q
Sbjct: 71  VHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIPGDQ 112


Top