BLASTX nr result

ID: Cephaelis21_contig00005290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005290
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002890152.1| TMS membrane family protein [Arabidopsis lyr...   147   5e-43
ref|NP_173069.1| serinc-domain containing protein [Arabidopsis t...   145   1e-42
ref|XP_004158797.1| PREDICTED: probable serine incorporator-like...   145   6e-42
ref|XP_002270610.1| PREDICTED: probable serine incorporator [Vit...   142   1e-41
ref|XP_002512768.1| Membrane protein PB1A10.07c, putative [Ricin...   142   2e-41

>ref|XP_002890152.1| TMS membrane family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335994|gb|EFH66411.1| TMS membrane family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 412

 Score =  147 bits (371), Expect(2) = 5e-43
 Identities = 65/80 (81%), Positives = 75/80 (93%)
 Frame = -2

Query: 241 TPDREWFQTDAVLRVSLGNFLFFTILSVIMIGVKNQRDPRDSVHHGGWMMKVISWFVLVI 62
           TPDREWF+TDAVLRVSLGNFLFF+ILSV+MIGVKNQ+DPRD +HHGGWMMK+I W +LVI
Sbjct: 69  TPDREWFETDAVLRVSLGNFLFFSILSVMMIGVKNQKDPRDGIHHGGWMMKIICWCILVI 128

Query: 61  LMFFIPNGVISFYETTSKFG 2
           LMFF+PN +ISFYE+ SKFG
Sbjct: 129 LMFFLPNEIISFYESMSKFG 148



 Score = 52.4 bits (124), Expect(2) = 5e-43
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = -3

Query: 441 RTVVSGISRKSARIAYCGLFALSLIVS 361
           RTVVSGISR+SARIAYCGLFALSLIVS
Sbjct: 20  RTVVSGISRRSARIAYCGLFALSLIVS 46


>ref|NP_173069.1| serinc-domain containing protein [Arabidopsis thaliana]
           gi|334182610|ref|NP_001185008.1| serinc-domain
           containing protein [Arabidopsis thaliana]
           gi|6587821|gb|AAF18512.1|AC010924_25 Contains similarity
           to gb|AF181686 membrane protein TMS1d from Drosophila
           melanogaster. ESTs gb|R64994, gb|AI994832, gb|Z47674
           come from this gene [Arabidopsis thaliana]
           gi|332191295|gb|AEE29416.1| serinc-domain containing
           protein [Arabidopsis thaliana]
           gi|332191296|gb|AEE29417.1| serinc-domain containing
           protein [Arabidopsis thaliana]
          Length = 412

 Score =  145 bits (367), Expect(2) = 1e-42
 Identities = 64/80 (80%), Positives = 74/80 (92%)
 Frame = -2

Query: 241 TPDREWFQTDAVLRVSLGNFLFFTILSVIMIGVKNQRDPRDSVHHGGWMMKVISWFVLVI 62
           TPDREWF+TDAVLRVSLGNFLFF+ILSV+MIGVKNQ+DPRD +HHGGWMMK+I W +LVI
Sbjct: 69  TPDREWFETDAVLRVSLGNFLFFSILSVMMIGVKNQKDPRDGIHHGGWMMKIICWCILVI 128

Query: 61  LMFFIPNGVISFYETTSKFG 2
            MFF+PN +ISFYE+ SKFG
Sbjct: 129 FMFFLPNEIISFYESMSKFG 148



 Score = 52.4 bits (124), Expect(2) = 1e-42
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = -3

Query: 441 RTVVSGISRKSARIAYCGLFALSLIVS 361
           RTVVSGISR+SARIAYCGLFALSLIVS
Sbjct: 20  RTVVSGISRRSARIAYCGLFALSLIVS 46


>ref|XP_004158797.1| PREDICTED: probable serine incorporator-like [Cucumis sativus]
          Length = 411

 Score =  145 bits (367), Expect(2) = 6e-42
 Identities = 63/80 (78%), Positives = 76/80 (95%)
 Frame = -2

Query: 241 TPDREWFQTDAVLRVSLGNFLFFTILSVIMIGVKNQRDPRDSVHHGGWMMKVISWFVLVI 62
           TP R+WFQTDAVLRVSLGNFLFFTILSV+M+GVK+QRDPRD++HHGGWM+KVI WF+LV+
Sbjct: 69  TPSRDWFQTDAVLRVSLGNFLFFTILSVMMVGVKSQRDPRDNIHHGGWMVKVICWFLLVV 128

Query: 61  LMFFIPNGVISFYETTSKFG 2
           LMFF+PN +I+FYE+ SKFG
Sbjct: 129 LMFFVPNEIITFYESISKFG 148



 Score = 50.1 bits (118), Expect(2) = 6e-42
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -3

Query: 441 RTVVSGISRKSARIAYCGLFALSLIVS 361
           RTVVS ISR+SARIAYCGLFALSLIVS
Sbjct: 20  RTVVSSISRRSARIAYCGLFALSLIVS 46


>ref|XP_002270610.1| PREDICTED: probable serine incorporator [Vitis vinifera]
           gi|298204750|emb|CBI25248.3| unnamed protein product
           [Vitis vinifera]
          Length = 413

 Score =  142 bits (359), Expect(2) = 1e-41
 Identities = 62/80 (77%), Positives = 73/80 (91%)
 Frame = -2

Query: 241 TPDREWFQTDAVLRVSLGNFLFFTILSVIMIGVKNQRDPRDSVHHGGWMMKVISWFVLVI 62
           TP+REWF+TDAVLRVS GNFLFFTIL+++MIGVKNQ+DPRD +HHGGWMMK+I W +LVI
Sbjct: 69  TPNREWFETDAVLRVSFGNFLFFTILAILMIGVKNQKDPRDGMHHGGWMMKIICWCILVI 128

Query: 61  LMFFIPNGVISFYETTSKFG 2
             FF+PN +ISFYETTSKFG
Sbjct: 129 FTFFLPNELISFYETTSKFG 148



 Score = 52.4 bits (124), Expect(2) = 1e-41
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = -3

Query: 441 RTVVSGISRKSARIAYCGLFALSLIVS 361
           RTVVSGISR+SARIAYCGLFALSLIVS
Sbjct: 20  RTVVSGISRRSARIAYCGLFALSLIVS 46


>ref|XP_002512768.1| Membrane protein PB1A10.07c, putative [Ricinus communis]
           gi|223547779|gb|EEF49271.1| Membrane protein PB1A10.07c,
           putative [Ricinus communis]
          Length = 413

 Score =  142 bits (357), Expect(2) = 2e-41
 Identities = 61/80 (76%), Positives = 73/80 (91%)
 Frame = -2

Query: 241 TPDREWFQTDAVLRVSLGNFLFFTILSVIMIGVKNQRDPRDSVHHGGWMMKVISWFVLVI 62
           TPDREWF+TDAVLRVSLGNFLFFTIL+ +M+GVK+Q+DPRD +HHGGWMMK+I W VLVI
Sbjct: 69  TPDREWFETDAVLRVSLGNFLFFTILATLMVGVKSQKDPRDGLHHGGWMMKIICWCVLVI 128

Query: 61  LMFFIPNGVISFYETTSKFG 2
            MFF+PN ++SFYE+ SKFG
Sbjct: 129 FMFFLPNEIVSFYESMSKFG 148



 Score = 52.4 bits (124), Expect(2) = 2e-41
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = -3

Query: 441 RTVVSGISRKSARIAYCGLFALSLIVS 361
           RTVVSGISR+SARIAYCGLFALSLIVS
Sbjct: 20  RTVVSGISRRSARIAYCGLFALSLIVS 46


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