BLASTX nr result

ID: Cephaelis21_contig00005273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005273
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK61821.1| RRM-containing protein [Citrus unshiu]                 99   4e-19
ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257...    97   1e-18
ref|XP_002280083.1| PREDICTED: uncharacterized protein LOC100257...    97   1e-18
ref|XP_002308540.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|NP_001242381.1| uncharacterized protein LOC100816255 [Glycin...    67   1e-09

>dbj|BAK61821.1| RRM-containing protein [Citrus unshiu]
          Length = 231

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 64/166 (38%), Positives = 81/166 (48%), Gaps = 2/166 (1%)
 Frame = -3

Query: 496 STPKPSFPGYLLSEASTLTTHHQWSSNDVRRSSEFLDNDXXXXXXXXXXXXXXXXXXXXX 317
           S  +PSF GYL SEA +LT+    SSN  R +S+FL  +                     
Sbjct: 17  SVARPSFAGYLTSEAPSLTSQQPLSSNGFRGASDFLHREVTPMRPG-------------- 62

Query: 316 XXXXXXXXXXXAYGIDDVRGF--HSEAGLGGLTGVSRSRGYLSPSRDPILQGQRPDVGSH 143
                      A G+ D  G   H E G+ G+T V+  +GY SP  DP L GQR D+   
Sbjct: 63  -----------ALGLVDTAGVGVHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIAPG 111

Query: 142 VGPGIRETSYERPSSLRRADGLSLAPRDSNILFVDGLPPDCSRREV 5
           + P I +     PSSLR   G  L   +SN+LFVDGLP DC+RREV
Sbjct: 112 INPTIPDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREV 157


>ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257637 isoform 1 [Vitis
           vinifera] gi|296081671|emb|CBI20676.3| unnamed protein
           product [Vitis vinifera]
          Length = 239

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 61/169 (36%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
 Frame = -3

Query: 499 GSTPKPSFPGYLLSEASTLTTHHQWSSNDVRRS-SEFLDNDXXXXXXXXXXXXXXXXXXX 323
           GS P+ SFPGYL  + S    HH W +ND+  + S++   D                   
Sbjct: 15  GSIPRSSFPGYLPLDPSVSAAHHLWGTNDLHGAPSDYPPKDILPVRPG------------ 62

Query: 322 XXXXXXXXXXXXXAYGIDDVRGFH--SEAGLGGLTGVSRSRGYLSPSRDPILQGQRPDVG 149
                        A+  DD+ G     +  +GG T  +  +GY +P  DP L GQR DV 
Sbjct: 63  -------------AHDFDDIMGIRVPPKPVIGGFTATTNIKGYPNPVEDPNLIGQRRDVA 109

Query: 148 SHVGPGIRETSYERPSSLRRADGLSLAPRDSNILFVDGLPPDCSRREVG 2
             + PGI +   ERPSS    + L    ++SNILFVDGLP DC+RREVG
Sbjct: 110 HGISPGIPDI--ERPSSFGNVESLPPPVQESNILFVDGLPKDCTRREVG 156


>ref|XP_002280083.1| PREDICTED: uncharacterized protein LOC100257637 isoform 2 [Vitis
           vinifera]
          Length = 229

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 61/169 (36%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
 Frame = -3

Query: 499 GSTPKPSFPGYLLSEASTLTTHHQWSSNDVRRS-SEFLDNDXXXXXXXXXXXXXXXXXXX 323
           GS P+ SFPGYL  + S    HH W +ND+  + S++   D                   
Sbjct: 15  GSIPRSSFPGYLPLDPSVSAAHHLWGTNDLHGAPSDYPPKDILPVRPG------------ 62

Query: 322 XXXXXXXXXXXXXAYGIDDVRGFH--SEAGLGGLTGVSRSRGYLSPSRDPILQGQRPDVG 149
                        A+  DD+ G     +  +GG T  +  +GY +P  DP L GQR DV 
Sbjct: 63  -------------AHDFDDIMGIRVPPKPVIGGFTATTNIKGYPNPVEDPNLIGQRRDVA 109

Query: 148 SHVGPGIRETSYERPSSLRRADGLSLAPRDSNILFVDGLPPDCSRREVG 2
             + PGI +   ERPSS    + L    ++SNILFVDGLP DC+RREVG
Sbjct: 110 HGISPGIPDI--ERPSSFGNVESLPPPVQESNILFVDGLPKDCTRREVG 156


>ref|XP_002308540.1| predicted protein [Populus trichocarpa] gi|222854516|gb|EEE92063.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 61/177 (34%), Positives = 77/177 (43%), Gaps = 11/177 (6%)
 Frame = -3

Query: 499 GSTPKPSFPGYLLSEASTLTTHHQWSSNDVR-RSSEFLDNDXXXXXXXXXXXXXXXXXXX 323
           GS  + SFPGY+ +EA  L +H    S +    SS+FL  D                   
Sbjct: 15  GSVSRLSFPGYVSTEAPPLASHSFPVSTEFPGASSDFLQRDINPLQLGSYGLNGYSGVGF 74

Query: 322 XXXXXXXXXXXXXA-----YGIDDV-----RGFHSEAGLGGLTGVSRSRGYLSPSRDPIL 173
                        +       ++D      RG  S   +GG    S  +GY SP  DP L
Sbjct: 75  RPEPVIGGVMPGASGKGYSSPLEDPSLLAQRGDASMHAIGGAIPGSTGKGYPSPLEDPSL 134

Query: 172 QGQRPDVGSHVGPGIRETSYERPSSLRRADGLSLAPRDSNILFVDGLPPDCSRREVG 2
             QR D    V   I +   +RP SLR ADG  +   +SNILFVDGLP DC+RREVG
Sbjct: 135 LSQRGDASVRVTAAIPDMINDRPGSLRSADGPPVPKGESNILFVDGLPTDCTRREVG 191


>ref|NP_001242381.1| uncharacterized protein LOC100816255 [Glycine max]
           gi|255647054|gb|ACU23995.1| unknown [Glycine max]
          Length = 220

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/90 (44%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
 Frame = -3

Query: 268 DVRGFHSEAG-LGGLTGVSRSRGYLSPSRDPILQGQRPDVGSHVGPGIRETSYERPSSLR 92
           D+  F+S  G LG        +GY SP  DP L  +R      +  G+ + S ERP+S  
Sbjct: 49  DIGLFYSADGTLGSRVHSEPVKGY-SPLADPCLSKKRDTTPLGINNGVPDVSSERPASKS 107

Query: 91  RADGLSLAPRDSNILFVDGLPPDCSRREVG 2
             DGL ++  DSNILFV GLP DC+RREVG
Sbjct: 108 SYDGLPISAADSNILFVGGLPKDCTRREVG 137


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