BLASTX nr result

ID: Cephaelis21_contig00005209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005209
         (2124 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA15421.1| HMR1 protein [Antirrhinum majus]                      107   1e-20
ref|XP_003634203.1| PREDICTED: uncharacterized protein LOC100853...   105   6e-20
ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis] g...   101   9e-19
gb|AAA50196.1| DNA-binding protein [Nicotiana tabacum]                 99   5e-18
ref|NP_001236260.1| HMG I/Y like protein [Glycine max] gi|157062...    97   2e-17

>emb|CAA15421.1| HMR1 protein [Antirrhinum majus]
          Length = 400

 Score =  107 bits (267), Expect = 1e-20
 Identities = 55/99 (55%), Positives = 74/99 (74%)
 Frame = +2

Query: 500 SSSPQIPQFGQVANPTPNLVSVPVTNNHPPYAQMITEAIAALKDKNGSSKRAIAKYIERV 679
           +++ + P    VANPTP        +NHPPYA+MIT AI+AL ++NGSSKRAIAKY+E  
Sbjct: 27  TTTAEAPIPNPVANPTPKRAPA---HNHPPYAEMITSAISALNERNGSSKRAIAKYVESN 83

Query: 680 YSNSHLPATHSALLTHNLKRLKEQGNIVMVKHSYKLPNA 796
           ++   LPATH++LL  +LKRLK+ G+I+MVKHSYKLP +
Sbjct: 84  FTG--LPATHASLLATHLKRLKDTGDILMVKHSYKLPRS 120



 Score = 79.7 bits (195), Expect = 3e-12
 Identities = 74/235 (31%), Positives = 92/235 (39%), Gaps = 48/235 (20%)
 Frame = +2

Query: 1082 KRRPGRPKKTDAGGAPAALQPNPTLGKKSPGRPRXXXXXXXXXXXXXXXXXXXXXXXXPR 1261
            KRRPGRP+K +     AA+   P    +                              PR
Sbjct: 134  KRRPGRPRKDNPQNLQAAV---PVFAPQVD--INAAPEIAVEQGSVYVELGPINGPSPPR 188

Query: 1262 GQPRLKADGTPAKPRGRPPKKNVPVQAPSNAGVPVPATGFLAPAVYV------------- 1402
            G+ R    G   + RGRPPK  V   A + A VP      +APA  V             
Sbjct: 189  GRGRPPKQGGRGRGRGRPPKTAVAPPAAAAAAVPGAPAAAVAPAAQVKGPGRPRGRPPKP 248

Query: 1403 -----GEGALATVASPAG----------------KRRGRPPS----------KTQNGPKM 1489
                 G    A VA PAG                KRRGRPP           +T   PK 
Sbjct: 249  INVVEGGAVAAPVAVPAGGVLPVAGGSVVAGVAPKRRGRPPKAGGEAKKPRLQTVVKPKT 308

Query: 1490 PRKLSGKPLGRPRKITSPTVAQ----QQPSAYNEMKQKFGIFQSKIKHTVSVLKP 1642
            PRKLSGKPLGRP+K  +  V+Q    Q   AY ++K K    QS++K   +V+KP
Sbjct: 309  PRKLSGKPLGRPKKNAAAAVSQVADTQLLVAYLDLKGKLENLQSRVKLAANVIKP 363


>ref|XP_003634203.1| PREDICTED: uncharacterized protein LOC100853898 [Vitis vinifera]
           gi|147815426|emb|CAN74749.1| hypothetical protein
           VITISV_021497 [Vitis vinifera]
           gi|297734307|emb|CBI15554.3| unnamed protein product
           [Vitis vinifera]
          Length = 355

 Score =  105 bits (261), Expect = 6e-20
 Identities = 56/101 (55%), Positives = 70/101 (69%)
 Frame = +2

Query: 494 PASSSPQIPQFGQVANPTPNLVSVPVTNNHPPYAQMITEAIAALKDKNGSSKRAIAKYIE 673
           PA+S   +      ANPTP   S    +NHPPYA+MIT AI AL ++ GSSK+AIAKYIE
Sbjct: 18  PAASEAHV---AHAANPTP---SHGPPHNHPPYAEMITTAIGALNERTGSSKKAIAKYIE 71

Query: 674 RVYSNSHLPATHSALLTHNLKRLKEQGNIVMVKHSYKLPNA 796
           R + +  LP +H ALLTH+LKRL+  G +VMVKHSY LP +
Sbjct: 72  RTFGD--LPPSHPALLTHHLKRLRSSGQVVMVKHSYMLPRS 110



 Score = 71.2 bits (173), Expect = 1e-09
 Identities = 67/212 (31%), Positives = 87/212 (41%), Gaps = 26/212 (12%)
 Frame = +2

Query: 1082 KRRPGRPKKTDAGGAPAA--------LQPNPTLGKKSPGRPRXXXXXXXXXXXXXXXXXX 1237
            KR  GRP K      P +        L   P + K+ PGRP                   
Sbjct: 128  KRGRGRPPKPKIPVQPTSESVLVAVGLVDGPVVPKRGPGRPPKSGGV------------- 174

Query: 1238 XXXXXXPRGQPRLKADGTPAKPRGRPPKKNVPVQAPSNAGVPVPATGFLAPAVYVGEGA- 1414
                   RG PR K+   P +  GRPPK  +    P       P T  +      G    
Sbjct: 175  -------RG-PRPKSLDGPKRRPGRPPKAQLGGVIPGGVPRERPRTAGVTKVKVSGRPRG 226

Query: 1415 ----LATVASPAG-----KRRGRPPSKTQNGPKMPRKLSGKPLGRPRKITSP----TVAQ 1555
                + TV +  G     KRRGRPP    +GPK P+KL+G+P+GRPRK  +       A 
Sbjct: 227  RPPKILTVGAGVGGGLSVKRRGRPPKA--DGPKRPKKLTGRPVGRPRKKLATGEILPAAS 284

Query: 1556 QQPSA----YNEMKQKFGIFQSKIKHTVSVLK 1639
            +QP A    Y ++KQK    Q KIK +V VL+
Sbjct: 285  EQPVAEWMNYEDLKQKLEHIQGKIKLSVGVLR 316


>ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis]
           gi|223525178|gb|EEF27887.1| histone h1/h5, putative
           [Ricinus communis]
          Length = 435

 Score =  101 bits (251), Expect = 9e-19
 Identities = 52/73 (71%), Positives = 58/73 (79%)
 Frame = +2

Query: 578 NHPPYAQMITEAIAALKDKNGSSKRAIAKYIERVYSNSHLPATHSALLTHNLKRLKEQGN 757
           NHPPY  MI  AI ALK+++GSSKRAIAKYIERVY    LP THSALLTH+LKRLK  G 
Sbjct: 68  NHPPYTDMIYAAITALKERDGSSKRAIAKYIERVYPG--LPPTHSALLTHHLKRLKNTGL 125

Query: 758 IVMVKHSYKLPNA 796
           +VMVK SYKLP +
Sbjct: 126 LVMVKKSYKLPRS 138



 Score = 79.3 bits (194), Expect = 4e-12
 Identities = 67/196 (34%), Positives = 81/196 (41%), Gaps = 9/196 (4%)
 Frame = +2

Query: 1082 KRRPGRPKKTDAGGAPAALQPNPTLGKKSPGRPRXXXXXXXXXXXXXXXXXXXXXXXXPR 1261
            KR  GRPKK   GGA AA+     LG K  GRP                         P+
Sbjct: 239  KRGRGRPKKVAGGGAAAAV-----LGGKRRGRPPKSAGRPKKLKSVGANGVKKGPKRLPK 293

Query: 1262 GQPRLKADGTPA----KPRGRPPKKNVPVQAPSNAGVPVPATGFLAPAVYVGEGALATVA 1429
                  A G  A    +PRGRP K   P  AP   GV             VG G    V 
Sbjct: 294  SVVVPYATGAAAAVTARPRGRPKKGAAPAAAPGVGGV-------------VGIGGAVVVP 340

Query: 1430 SPAGKRRGRPPSKTQNGPKMPRKLSGKPLGRPRKITSPTVA-----QQQPSAYNEMKQKF 1594
               GKR GRPP         P+K   +P+GRP+K  + + A     Q Q  AY ++K KF
Sbjct: 341  ---GKRAGRPPKVVGGVVVNPKK---RPVGRPKKNDNVSWAAAQASQLQSEAYGDLKMKF 394

Query: 1595 GIFQSKIKHTVSVLKP 1642
              FQSK++  V VL+P
Sbjct: 395  EFFQSKVRQAVGVLRP 410


>gb|AAA50196.1| DNA-binding protein [Nicotiana tabacum]
          Length = 546

 Score = 99.0 bits (245), Expect = 5e-18
 Identities = 55/101 (54%), Positives = 67/101 (66%), Gaps = 3/101 (2%)
 Frame = +2

Query: 494 PASSSPQIPQFGQVANPTPNLVSVPVTN---NHPPYAQMITEAIAALKDKNGSSKRAIAK 664
           P  +S Q+        PTP     P  +    HPPYA+MIT AI ALK+++GSS+ AIAK
Sbjct: 14  PTFNSAQV--VNHAPTPTPPQPPPPAPSFSPTHPPYAEMITAAITALKERDGSSRIAIAK 71

Query: 665 YIERVYSNSHLPATHSALLTHNLKRLKEQGNIVMVKHSYKL 787
           YI+RVY+N  LP  HSALLTH+LKRLK  G + MVKHSY L
Sbjct: 72  YIDRVYTN--LPPNHSALLTHHLKRLKNSGYLAMVKHSYML 110



 Score = 79.7 bits (195), Expect = 3e-12
 Identities = 74/211 (35%), Positives = 86/211 (40%), Gaps = 24/211 (11%)
 Frame = +2

Query: 1082 KRRPGRPKKTDAGGAPAALQPNPTLGKKSPGRPRXXXXXXXXXXXXXXXXXXXXXXXXPR 1261
            KRRPGRP K+    A     P   +G    GRPR                          
Sbjct: 309  KRRPGRPPKSVTVNAA----PGSAMGSGRRGRPRKNSVPGRRGRPRKNAAVAAANGGANV 364

Query: 1262 GQ--------PRLKADGTPA-----KPRGRPPKKNVPVQAPSNA-GVPVPA---TGFLAP 1390
                        + A G P      K RGRPP+ + P  A      VP+ A   T  L  
Sbjct: 365  ANIPSVGANVTNVPAGGVPGAITTPKRRGRPPRSSGPPAATVGVTDVPIAAAFDTENLPN 424

Query: 1391 AVYVGEGALATVASPAGKRRGRPPSKTQNGP-----KMPRKLSGKPLGRPRK-ITSPTVA 1552
            AV  G         P GKRRGRPP            K PRKLSGKPLGRPRK +TSP V+
Sbjct: 425  AVGGGGVTNNGALPPLGKRRGRPPKSYGAAAAAPTVKRPRKLSGKPLGRPRKNVTSPAVS 484

Query: 1553 QQQ-PSAYNEMKQKFGIFQSKIKHTVSVLKP 1642
              +   AY E+K K    QS+IK   + LKP
Sbjct: 485  DPKLVVAYEELKGKLEHMQSRIKEAANALKP 515


>ref|NP_001236260.1| HMG I/Y like protein [Glycine max] gi|15706274|emb|CAC69997.1| HMG
           I/Y like protein [Glycine max]
          Length = 413

 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 52/101 (51%), Positives = 66/101 (65%)
 Frame = +2

Query: 494 PASSSPQIPQFGQVANPTPNLVSVPVTNNHPPYAQMITEAIAALKDKNGSSKRAIAKYIE 673
           PA++ P   +      P  N        NHPPY +MI  AI ALK+K+GSSKRAI KY+E
Sbjct: 10  PATTVPFTVEPSNHVTPADN-----TNTNHPPYDEMIYTAIGALKEKDGSSKRAIGKYME 64

Query: 674 RVYSNSHLPATHSALLTHNLKRLKEQGNIVMVKHSYKLPNA 796
           +VY +  LP THSALLTH+L RLK  G +++VK SYKLP +
Sbjct: 65  QVYKD--LPPTHSALLTHHLNRLKSAGLLILVKKSYKLPGS 103


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