BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005157
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...    82   1e-19
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    84   4e-19
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    78   3e-18
gb|AAB84340.1| putative non-LTR retroelement reverse transcripta...    82   4e-18
gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]      78   4e-18

>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score = 81.6 bits (200), Expect(2) = 1e-19
 Identities = 39/72 (54%), Positives = 49/72 (68%)
 Frame = -2

Query: 290 LSKPVQKEEVRKAVFSMKPNSAPGPDGMTPLFFQKFWHIIQHDIFIAVKYFFTSGRILQS 111
           L KPV +EEVR  VF M    APGPDG+  +F+QK W I+  DI+ AV +FFT+G ILQ 
Sbjct: 437 LIKPVTREEVRNVVFQMGSLKAPGPDGIPAIFYQKHWSIVGEDIWRAVSHFFTTGYILQE 496

Query: 110 INHTLVSLIPKI 75
            N T + LIPK+
Sbjct: 497 WNQTNICLIPKV 508



 Score = 39.3 bits (90), Expect(2) = 1e-19
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = -1

Query: 66  ENLQQFRPISLCNVLYKIISKI 1
           E   QFRPISLCNV+YKIISKI
Sbjct: 512 EQACQFRPISLCNVIYKIISKI 533


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 84.3 bits (207), Expect(2) = 4e-19
 Identities = 37/88 (42%), Positives = 58/88 (65%)
 Frame = -2

Query: 314 ISQSMNKRLSKPVQKEEVRKAVFSMKPNSAPGPDGMTPLFFQKFWHIIQHDIFIAVKYFF 135
           +S++ N  L+  V  EE++ AVF + P+ +PGPDG  P FFQK+W +I   +  AV+ FF
Sbjct: 432 VSEADNAYLTSAVSPEEIKNAVFDLAPDKSPGPDGFPPYFFQKYWTLIGKSVCRAVQAFF 491

Query: 134 TSGRILQSINHTLVSLIPKIPNAKISNN 51
            SG +L+ +NHT ++LIPK+     +N+
Sbjct: 492 HSGYMLKEVNHTFLALIPKVDKPVNANH 519



 Score = 35.0 bits (79), Expect(2) = 4e-19
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = -1

Query: 63  NLQQFRPISLCNVLYKIISKI 1
           N   FRPISLC+ +YK+ISKI
Sbjct: 516 NANHFRPISLCSTIYKVISKI 536


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 78.2 bits (191), Expect(2) = 3e-18
 Identities = 37/84 (44%), Positives = 51/84 (60%)
 Frame = -2

Query: 314 ISQSMNKRLSKPVQKEEVRKAVFSMKPNSAPGPDGMTPLFFQKFWHIIQHDIFIAVKYFF 135
           +S  MN  L  P+ KEEV++A FS+ P+  PGPDGM    +Q+FW  +   I   V+ FF
Sbjct: 416 VSDQMNNNLLAPITKEEVQRATFSINPHKCPGPDGMNGFLYQQFWETMGDQITEMVQAFF 475

Query: 134 TSGRILQSINHTLVSLIPKIPNAK 63
            SG I + +N T + LIPKI  A+
Sbjct: 476 RSGSIEEGMNKTNICLIPKILKAE 499



 Score = 38.5 bits (88), Expect(2) = 3e-18
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = -1

Query: 72  KCENLQQFRPISLCNVLYKIISKI 1
           K E +  FRPISLCNV+YK+I K+
Sbjct: 497 KAEKMTDFRPISLCNVIYKVIGKL 520


>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1094

 Score = 82.4 bits (202), Expect(2) = 4e-18
 Identities = 37/85 (43%), Positives = 58/85 (68%)
 Frame = -2

Query: 329 GLPRTISQSMNKRLSKPVQKEEVRKAVFSMKPNSAPGPDGMTPLFFQKFWHIIQHDIFIA 150
           G  + +++ MN+ L+K V ++E+ KAVFS+   SAPGPDG T LFFQ+ W ++++ I   
Sbjct: 140 GFNKRVTEDMNQDLTKKVNEQEIYKAVFSINAESAPGPDGFTALFFQRQWPLVKNQIISD 199

Query: 149 VKYFFTSGRILQSINHTLVSLIPKI 75
           ++ FF +G + +  NHT + LIPKI
Sbjct: 200 IELFFQTGILPEDWNHTHLCLIPKI 224



 Score = 33.5 bits (75), Expect(2) = 4e-18
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = -1

Query: 72  KCENLQQFRPISLCNVLYKIISKI 1
           K   +   RPISLC+V+YKIISKI
Sbjct: 226 KPARMADIRPISLCSVMYKIISKI 249


>gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]
          Length = 381

 Score = 78.2 bits (191), Expect(2) = 4e-18
 Identities = 37/84 (44%), Positives = 51/84 (60%)
 Frame = -2

Query: 320 RTISQSMNKRLSKPVQKEEVRKAVFSMKPNSAPGPDGMTPLFFQKFWHIIQHDIFIAVKY 141
           R +S   N  LS+ V  EEVR +VFS+    APGPDG+T  F+Q +W I+   +   V++
Sbjct: 216 RVVSDECNAYLSRDVTAEEVRISVFSIGATRAPGPDGLTASFYQTYWDIVGPAVVEEVRH 275

Query: 140 FFTSGRILQSINHTLVSLIPKIPN 69
           FF +G     +NHT + LIPKI N
Sbjct: 276 FFNTGEFYSDLNHTNLCLIPKITN 299



 Score = 37.7 bits (86), Expect(2) = 4e-18
 Identities = 18/28 (64%), Positives = 22/28 (78%), Gaps = 3/28 (10%)
 Frame = -1

Query: 75  PKCEN---LQQFRPISLCNVLYKIISKI 1
           PK  N   ++ FRPI+LCNV+YKIISKI
Sbjct: 295 PKITNPITMKDFRPIALCNVMYKIISKI 322