BLASTX nr result

ID: Cephaelis21_contig00005089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00005089
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32365.3| unnamed protein product [Vitis vinifera]              169   1e-39
ref|XP_003521240.1| PREDICTED: small nuclear ribonucleoprotein S...   165   2e-38
ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein S...   165   2e-38
gb|AFK42989.1| unknown [Lotus japonicus]                              164   2e-38
gb|AFK42488.1| unknown [Medicago truncatula]                          164   2e-38

>emb|CBI32365.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  169 bits (427), Expect = 1e-39
 Identities = 85/86 (98%), Positives = 85/86 (98%)
 Frame = -1

Query: 593 SPTMKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDH 414
           SP MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDH
Sbjct: 28  SPKMKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDH 87

Query: 413 LSVRGNNIRYYILPDSLNLETLLVEE 336
           LSVRGNNIRYYILPDSLNLETLLVEE
Sbjct: 88  LSVRGNNIRYYILPDSLNLETLLVEE 113


>ref|XP_003521240.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 1
           [Glycine max] gi|356504918|ref|XP_003521241.1|
           PREDICTED: small nuclear ribonucleoprotein Sm D1-like
           isoform 2 [Glycine max]
          Length = 114

 Score =  165 bits (417), Expect = 2e-38
 Identities = 83/83 (100%), Positives = 83/83 (100%)
 Frame = -1

Query: 584 MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 405
           MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 404 RGNNIRYYILPDSLNLETLLVEE 336
           RGNNIRYYILPDSLNLETLLVEE
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEE 83


>ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 1
           [Vitis vinifera] gi|225436988|ref|XP_002277231.1|
           PREDICTED: small nuclear ribonucleoprotein Sm D1-like
           isoform 2 [Vitis vinifera]
          Length = 114

 Score =  165 bits (417), Expect = 2e-38
 Identities = 83/83 (100%), Positives = 83/83 (100%)
 Frame = -1

Query: 584 MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 405
           MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 404 RGNNIRYYILPDSLNLETLLVEE 336
           RGNNIRYYILPDSLNLETLLVEE
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEE 83


>gb|AFK42989.1| unknown [Lotus japonicus]
          Length = 116

 Score =  164 bits (416), Expect = 2e-38
 Identities = 82/83 (98%), Positives = 83/83 (100%)
 Frame = -1

Query: 584 MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 405
           MKLVRFLMKLNNETVSIELKNGT+VHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 404 RGNNIRYYILPDSLNLETLLVEE 336
           RGNNIRYYILPDSLNLETLLVEE
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEE 83


>gb|AFK42488.1| unknown [Medicago truncatula]
          Length = 115

 Score =  164 bits (416), Expect = 2e-38
 Identities = 82/83 (98%), Positives = 83/83 (100%)
 Frame = -1

Query: 584 MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 405
           MKLVRFLMKLNNETVSIELKNGT+VHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 404 RGNNIRYYILPDSLNLETLLVEE 336
           RGNNIRYYILPDSLNLETLLVEE
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEE 83


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