BLASTX nr result

ID: Cephaelis21_contig00004989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00004989
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containi...   226   1e-57
ref|XP_002306801.1| predicted protein [Populus trichocarpa] gi|2...   224   6e-57
emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]   223   1e-56
ref|XP_002520950.1| pentatricopeptide repeat-containing protein,...   203   1e-50
sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-c...   186   1e-45

>ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein At3g63370-like
            [Vitis vinifera]
          Length = 993

 Score =  226 bits (577), Expect = 1e-57
 Identities = 105/145 (72%), Positives = 121/145 (83%)
 Frame = -1

Query: 436  MLGRANHLEEAFHFVKMMKMEPTAAVWCALLGACQVHSNKRIGKIAASKLLELDPENPGN 257
            +LGRANHLEEA+ FVK M++EPTA VWCALLGACQ+HSNK +G+IAA KLLE+DPENPGN
Sbjct: 766  LLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGN 825

Query: 256  YVLVSNAYAATERWEDAEEVRLTMKGKGLKKDPACSWIEIGNKCHVFVAHDRSHQESVEI 77
            YVLVSN YAA  RW+D EEVR+ MK  GLKK+P CSWIE+GNK H F+A D+SH +S EI
Sbjct: 826  YVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEI 885

Query: 76   NQKLDQITEKLVREGGYVPQTKQVL 2
              KL QITEKL +EGGYV QTK VL
Sbjct: 886  YSKLSQITEKLAKEGGYVAQTKFVL 910


>ref|XP_002306801.1| predicted protein [Populus trichocarpa] gi|222856250|gb|EEE93797.1|
           predicted protein [Populus trichocarpa]
          Length = 787

 Score =  224 bits (571), Expect = 6e-57
 Identities = 101/145 (69%), Positives = 125/145 (86%)
 Frame = -1

Query: 436 MLGRANHLEEAFHFVKMMKMEPTAAVWCALLGACQVHSNKRIGKIAASKLLELDPENPGN 257
           +LGRANHLEEA+HFVK M++EPTA VWCA LGAC++HSNK++G+IAA KLL+LDP++PG+
Sbjct: 560 LLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGS 619

Query: 256 YVLVSNAYAATERWEDAEEVRLTMKGKGLKKDPACSWIEIGNKCHVFVAHDRSHQESVEI 77
           YVL+SN +AA+ RW+D EEVR+ MKG GLKK+P CSWIE+GNK H F+  D+SH ES +I
Sbjct: 620 YVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKI 679

Query: 76  NQKLDQITEKLVREGGYVPQTKQVL 2
            QKL QITEKL +EGGYVPQTK VL
Sbjct: 680 YQKLAQITEKLEKEGGYVPQTKLVL 704


>emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  223 bits (568), Expect = 1e-56
 Identities = 103/145 (71%), Positives = 120/145 (82%)
 Frame = -1

Query: 436  MLGRANHLEEAFHFVKMMKMEPTAAVWCALLGACQVHSNKRIGKIAASKLLELDPENPGN 257
            +LGRANHLEEA+ FVK M++EPTA VWCALLGACQ+HSNK +G+IAA KLLE+DPENPGN
Sbjct: 730  LLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGN 789

Query: 256  YVLVSNAYAATERWEDAEEVRLTMKGKGLKKDPACSWIEIGNKCHVFVAHDRSHQESVEI 77
            YVLVSN Y+A  RW+D E VR+ MK  GLKK+P CSWIE+GNK H F+A D+SH +S EI
Sbjct: 790  YVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEI 849

Query: 76   NQKLDQITEKLVREGGYVPQTKQVL 2
              KL QITEKL +EGGYV QTK VL
Sbjct: 850  YSKLSQITEKLAKEGGYVAQTKFVL 874


>ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223539787|gb|EEF41367.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 835

 Score =  203 bits (516), Expect = 1e-50
 Identities = 96/145 (66%), Positives = 114/145 (78%)
 Frame = -1

Query: 436  MLGRANHLEEAFHFVKMMKMEPTAAVWCALLGACQVHSNKRIGKIAASKLLELDPENPGN 257
            +LGR N LEEA+  VK M+ EPT  VWCALLGAC++HSNK IG++AA KLLELD +NPGN
Sbjct: 608  LLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGN 667

Query: 256  YVLVSNAYAATERWEDAEEVRLTMKGKGLKKDPACSWIEIGNKCHVFVAHDRSHQESVEI 77
            YVLVSN +AA  RW+D EEVR+ MKG GL K+P CSWIE+GNK H F++ D+ H E  +I
Sbjct: 668  YVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKI 727

Query: 76   NQKLDQITEKLVREGGYVPQTKQVL 2
             QKL Q+TEKL REGGYV QTK VL
Sbjct: 728  YQKLAQVTEKLKREGGYVAQTKFVL 752


>sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  186 bits (473), Expect = 1e-45
 Identities = 91/145 (62%), Positives = 106/145 (73%)
 Frame = -1

Query: 436  MLGRANHLEEAFHFVKMMKMEPTAAVWCALLGACQVHSNKRIGKIAASKLLELDPENPGN 257
            MLGRAN + EAF FVKMMK EPTA VWCALL AC+ HS K IG+IAA +LLEL+P+NPGN
Sbjct: 733  MLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGN 792

Query: 256  YVLVSNAYAATERWEDAEEVRLTMKGKGLKKDPACSWIEIGNKCHVFVAHDRSHQESVEI 77
             VLVSN +A   RW D E+VR  MK  G++K P CSWIE+  K H F A D+SH ES EI
Sbjct: 793  LVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEI 852

Query: 76   NQKLDQITEKLVREGGYVPQTKQVL 2
             +KL ++T KL RE GYV  TK VL
Sbjct: 853  YEKLSEVTRKLEREVGYVADTKFVL 877


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