BLASTX nr result

ID: Cephaelis21_contig00004825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00004825
         (742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305858.1| histone 2 [Populus trichocarpa] gi|224106525...   174   2e-41
ref|XP_002301712.1| histone 2 [Populus trichocarpa] gi|118489629...   174   2e-41
ref|NP_195877.1| histone H2B [Arabidopsis thaliana] gi|75181188|...   173   3e-41
ref|XP_003538012.1| PREDICTED: probable histone H2B.1-like [Glyc...   173   4e-41
ref|NP_001237892.1| uncharacterized protein LOC100305866 [Glycin...   173   4e-41

>ref|XP_002305858.1| histone 2 [Populus trichocarpa] gi|224106525|ref|XP_002314196.1|
           histone 2 [Populus trichocarpa]
           gi|222848822|gb|EEE86369.1| histone 2 [Populus
           trichocarpa] gi|222850604|gb|EEE88151.1| histone 2
           [Populus trichocarpa]
          Length = 93

 Score =  174 bits (440), Expect = 2e-41
 Identities = 87/93 (93%), Positives = 93/93 (100%)
 Frame = +2

Query: 203 RSSETYKIYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLSRYNKKPTITS 382
           +S+ETYKIY+FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRL+RYNKKPTITS
Sbjct: 1   KSTETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITS 60

Query: 383 REIQTAVKLVLPGELAKHAVSEGTKAVTKFTSA 481
           REIQTAV+LVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 61  REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 93


>ref|XP_002301712.1| histone 2 [Populus trichocarpa] gi|118489629|gb|ABK96616.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|222843438|gb|EEE80985.1| histone 2 [Populus
           trichocarpa]
          Length = 148

 Score =  174 bits (440), Expect = 2e-41
 Identities = 87/93 (93%), Positives = 93/93 (100%)
 Frame = +2

Query: 203 RSSETYKIYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLSRYNKKPTITS 382
           +S+ETYKIY+FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRL+RYNKKPTITS
Sbjct: 56  KSTETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITS 115

Query: 383 REIQTAVKLVLPGELAKHAVSEGTKAVTKFTSA 481
           REIQTAV+LVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 116 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148


>ref|NP_195877.1| histone H2B [Arabidopsis thaliana]
           gi|75181188|sp|Q9LZ45.3|H2B9_ARATH RecName: Full=Histone
           H2B.9; AltName: Full=HTB10 gi|7413646|emb|CAB85994.1|
           putative protein [Arabidopsis thaliana]
           gi|332003108|gb|AED90491.1| histone H2B [Arabidopsis
           thaliana]
          Length = 132

 Score =  173 bits (439), Expect = 3e-41
 Identities = 87/106 (82%), Positives = 96/106 (90%)
 Frame = +2

Query: 164 GSGDLXXXXXXXXRSSETYKIYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS 343
           G+ ++        +S+ETYKIY+FKVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESS
Sbjct: 27  GTSEIVKKKKKTKKSTETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESS 86

Query: 344 RLSRYNKKPTITSREIQTAVKLVLPGELAKHAVSEGTKAVTKFTSA 481
           RL+RYNKKPTITSREIQTAV+LVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 87  RLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 132


>ref|XP_003538012.1| PREDICTED: probable histone H2B.1-like [Glycine max]
          Length = 143

 Score =  173 bits (438), Expect = 4e-41
 Identities = 89/106 (83%), Positives = 95/106 (89%)
 Frame = +2

Query: 164 GSGDLXXXXXXXXRSSETYKIYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS 343
           G+G          +S ETYKIY+FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS
Sbjct: 38  GAGGEGKKKKRNKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS 97

Query: 344 RLSRYNKKPTITSREIQTAVKLVLPGELAKHAVSEGTKAVTKFTSA 481
           RL+RYNKKPTITSREIQTAV+LVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 98  RLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 143


>ref|NP_001237892.1| uncharacterized protein LOC100305866 [Glycine max]
           gi|356539038|ref|XP_003538007.1| PREDICTED: probable
           histone H2B.1-like isoform 1 [Glycine max]
           gi|356539040|ref|XP_003538008.1| PREDICTED: probable
           histone H2B.1-like isoform 2 [Glycine max]
           gi|356539044|ref|XP_003538010.1| PREDICTED: probable
           histone H2B.1-like isoform 1 [Glycine max]
           gi|356539046|ref|XP_003538011.1| PREDICTED: probable
           histone H2B.1-like isoform 2 [Glycine max]
           gi|255626827|gb|ACU13758.1| unknown [Glycine max]
          Length = 148

 Score =  173 bits (438), Expect = 4e-41
 Identities = 89/106 (83%), Positives = 95/106 (89%)
 Frame = +2

Query: 164 GSGDLXXXXXXXXRSSETYKIYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS 343
           G+G          +S ETYKIY+FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS
Sbjct: 43  GAGGEGKKKKRNKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS 102

Query: 344 RLSRYNKKPTITSREIQTAVKLVLPGELAKHAVSEGTKAVTKFTSA 481
           RL+RYNKKPTITSREIQTAV+LVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 103 RLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148


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