BLASTX nr result

ID: Cephaelis21_contig00004799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00004799
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-...   376   e-102
emb|CBI25280.3| unnamed protein product [Vitis vinifera]              363   5e-98
ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotei...   359   6e-97
ref|XP_002525006.1| RNA-binding protein with multiple splicing, ...   357   2e-96
ref|NP_683582.2| RNA recognition motif-containing protein [Arabi...   345   1e-92

>ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-like [Vitis vinifera]
          Length = 328

 Score =  376 bits (965), Expect = e-102
 Identities = 197/307 (64%), Positives = 207/307 (67%)
 Frame = +1

Query: 148  MAGAGIHPYHQQWXXXXXXXXXXXXXXXXXXXXXXXXXXXMDTRSRLPNDEVRTIFISGL 327
            MAGAGIHPYHQQW                           ++  +R  +DEVRTIFISGL
Sbjct: 1    MAGAGIHPYHQQWPPAPAPQPSAPGAPPAPAHPPPIL---VENPNRPNSDEVRTIFISGL 57

Query: 328  PEDVKERELLNLLRWLPGYEASQVNFKGEHPMGFALFSTPQLAVAAKDALQDMVFDTESN 507
            PEDVKEREL NLLRWLPGYEASQVNFKGEHPMGFALFSTPQLAVAAKDALQ+MVFD ES 
Sbjct: 58   PEDVKERELQNLLRWLPGYEASQVNFKGEHPMGFALFSTPQLAVAAKDALQEMVFDAESK 117

Query: 508  SVLHIEMAKKNLFVKRGIVADSNAYDQSKRMRTGGDYTHTAYXXXXXXXXXXXXVWGPHG 687
            SVLH EMAKKNLFVKRGIVADS+AYDQSKR+RTGGDYTHT Y            VWGPHG
Sbjct: 118  SVLHTEMAKKNLFVKRGIVADSSAYDQSKRLRTGGDYTHTGYSSPSPFHPPPAPVWGPHG 177

Query: 688  XXXXXXXXXXXXXGYXXXXXXXXXXXXXXXXXXXXXXQNTKDNPPCNTLFXXXXXXXXXX 867
                          Y                      QNTKDNPPCNTLF          
Sbjct: 178  YMAPAPPPYDPYGAYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENINE 237

Query: 868  XXXXXXFSVQPGFKQMKVLRQERHTVCFIEFEDVNTATNVHHTLQGAVIPSSGSVGMRIQ 1047
                  FSVQPGFKQMK+LRQERHTVCFIEFED+NTATNVHH+LQGAVIPSSGSVGMRIQ
Sbjct: 238  EELRGLFSVQPGFKQMKILRQERHTVCFIEFEDMNTATNVHHSLQGAVIPSSGSVGMRIQ 297

Query: 1048 YSKNPFG 1068
            YSKNPFG
Sbjct: 298  YSKNPFG 304


>emb|CBI25280.3| unnamed protein product [Vitis vinifera]
          Length = 299

 Score =  363 bits (931), Expect = 5e-98
 Identities = 191/301 (63%), Positives = 201/301 (66%)
 Frame = +1

Query: 148  MAGAGIHPYHQQWXXXXXXXXXXXXXXXXXXXXXXXXXXXMDTRSRLPNDEVRTIFISGL 327
            MAGAGIHPYHQQW                           ++  +R  +DEVRTIFISGL
Sbjct: 1    MAGAGIHPYHQQWPPAPAPQPSAPGAPPAPAHPPPIL---VENPNRPNSDEVRTIFISGL 57

Query: 328  PEDVKERELLNLLRWLPGYEASQVNFKGEHPMGFALFSTPQLAVAAKDALQDMVFDTESN 507
            PEDVKEREL NLLRWLPGYEASQVNFKGEHPMGFALFSTPQLAVAAKDALQ+MVFD ES 
Sbjct: 58   PEDVKERELQNLLRWLPGYEASQVNFKGEHPMGFALFSTPQLAVAAKDALQEMVFDAESK 117

Query: 508  SVLHIEMAKKNLFVKRGIVADSNAYDQSKRMRTGGDYTHTAYXXXXXXXXXXXXVWGPHG 687
            SVLH EMAKKNLFVKRGIVADS+AYDQSKR+RTGGDYTHT Y            VWGPHG
Sbjct: 118  SVLHTEMAKKNLFVKRGIVADSSAYDQSKRLRTGGDYTHTGYSSPSPFHPPPAPVWGPHG 177

Query: 688  XXXXXXXXXXXXXGYXXXXXXXXXXXXXXXXXXXXXXQNTKDNPPCNTLFXXXXXXXXXX 867
                          Y                      QNTKDNPPCNTLF          
Sbjct: 178  YMAPAPPPYDPYGAYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENINE 237

Query: 868  XXXXXXFSVQPGFKQMKVLRQERHTVCFIEFEDVNTATNVHHTLQGAVIPSSGSVGMRIQ 1047
                  FSVQPGFKQMK+LRQERHTVCFIEFED+NTATNVHH+LQGAVIPSSGSVGMRIQ
Sbjct: 238  EELRGLFSVQPGFKQMKILRQERHTVCFIEFEDMNTATNVHHSLQGAVIPSSGSVGMRIQ 297

Query: 1048 Y 1050
            Y
Sbjct: 298  Y 298


>ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
            sativus] gi|449515829|ref|XP_004164950.1| PREDICTED: U1
            small nuclear ribonucleoprotein A-like [Cucumis sativus]
          Length = 335

 Score =  359 bits (922), Expect = 6e-97
 Identities = 188/311 (60%), Positives = 199/311 (63%), Gaps = 4/311 (1%)
 Frame = +1

Query: 148  MAGAGIHPYHQQWXXXXXXXXXXXXXXXXXXXXXXXXXXX----MDTRSRLPNDEVRTIF 315
            MAG GIHPYHQQW                               +D   R  +DEVRTIF
Sbjct: 1    MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIF 60

Query: 316  ISGLPEDVKERELLNLLRWLPGYEASQVNFKGEHPMGFALFSTPQLAVAAKDALQDMVFD 495
            I+GLPEDVKEREL NLLRWLPGYEASQVNFKGE PMGFALFS  Q A+AAKDALQDMVFD
Sbjct: 61   ITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFD 120

Query: 496  TESNSVLHIEMAKKNLFVKRGIVADSNAYDQSKRMRTGGDYTHTAYXXXXXXXXXXXXVW 675
             ES SVLH EMAKKNLFVKRGIVAD++ YDQSKR+RTGGDY HT Y            +W
Sbjct: 121  AESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIW 180

Query: 676  GPHGXXXXXXXXXXXXXGYXXXXXXXXXXXXXXXXXXXXXXQNTKDNPPCNTLFXXXXXX 855
            GPHG             GY                      QNTKDNPPCNTLF      
Sbjct: 181  GPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGE 240

Query: 856  XXXXXXXXXXFSVQPGFKQMKVLRQERHTVCFIEFEDVNTATNVHHTLQGAVIPSSGSVG 1035
                      FSVQPGFKQMK+LRQERHTVCFIEFEDVN ATNVHH+LQGAVIPSSGSVG
Sbjct: 241  NVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG 300

Query: 1036 MRIQYSKNPFG 1068
            MRIQ+SKNPFG
Sbjct: 301  MRIQFSKNPFG 311


>ref|XP_002525006.1| RNA-binding protein with multiple splicing, putative [Ricinus
            communis] gi|223535714|gb|EEF37378.1| RNA-binding protein
            with multiple splicing, putative [Ricinus communis]
          Length = 337

 Score =  357 bits (917), Expect = 2e-96
 Identities = 192/313 (61%), Positives = 206/313 (65%), Gaps = 6/313 (1%)
 Frame = +1

Query: 148  MAGAGIHPYH-QQWXXXXXXXXXXXXXXXXXXXXXXXXXXX----MDTRSRLP-NDEVRT 309
            MAGAGIHPYH QQW                               +D  +R P +DEVRT
Sbjct: 1    MAGAGIHPYHHQQWPPAAAPPPPPAAAGGAAPPPPSAVHHPPTVLVDNSNRGPTHDEVRT 60

Query: 310  IFISGLPEDVKERELLNLLRWLPGYEASQVNFKGEHPMGFALFSTPQLAVAAKDALQDMV 489
            IFI+GLPEDVKEREL NLLRWLPGYEASQVN+KGE PMGFALFST Q A+AAK+ALQDM+
Sbjct: 61   IFITGLPEDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTSQFAIAAKEALQDML 120

Query: 490  FDTESNSVLHIEMAKKNLFVKRGIVADSNAYDQSKRMRTGGDYTHTAYXXXXXXXXXXXX 669
            FD ES S+LH EMAKKNLFVKRGIVADSNAYDQSKR+RTGGDY+HTAY            
Sbjct: 121  FDAESKSILHTEMAKKNLFVKRGIVADSNAYDQSKRLRTGGDYSHTAYTTPSPFHPPPAP 180

Query: 670  VWGPHGXXXXXXXXXXXXXGYXXXXXXXXXXXXXXXXXXXXXXQNTKDNPPCNTLFXXXX 849
            VWGPHG             GY                      QNTKDNPPCNTLF    
Sbjct: 181  VWGPHGYMAPAPPPYDPYAGYPVPQVPMPAPAPMPAPSSYLPVQNTKDNPPCNTLFIGNL 240

Query: 850  XXXXXXXXXXXXFSVQPGFKQMKVLRQERHTVCFIEFEDVNTATNVHHTLQGAVIPSSGS 1029
                        FSVQPGFKQMKVLRQERHTVCFIEFEDVN+A+NVH +LQGAVIPSSGS
Sbjct: 241  GENINEDELRGLFSVQPGFKQMKVLRQERHTVCFIEFEDVNSASNVHRSLQGAVIPSSGS 300

Query: 1030 VGMRIQYSKNPFG 1068
            VGMRIQYSKNPFG
Sbjct: 301  VGMRIQYSKNPFG 313


>ref|NP_683582.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
            gi|13605613|gb|AAK32800.1|AF361632_1 At3g21211
            [Arabidopsis thaliana] gi|23505943|gb|AAN28831.1|
            At3g21211/At3g21211 [Arabidopsis thaliana]
            gi|26451397|dbj|BAC42798.1| unknown protein [Arabidopsis
            thaliana] gi|110740646|dbj|BAE98426.1| hypothetical
            protein [Arabidopsis thaliana]
            gi|222423570|dbj|BAH19754.1| AT3G21215 [Arabidopsis
            thaliana] gi|332642956|gb|AEE76477.1| RNA recognition
            motif-containing protein [Arabidopsis thaliana]
          Length = 339

 Score =  345 bits (884), Expect = 1e-92
 Identities = 185/314 (58%), Positives = 198/314 (63%), Gaps = 7/314 (2%)
 Frame = +1

Query: 148  MAGAGIHPYHQQWXXXXXXXXXXXXXXXXXXXXXXXXXXX------MDTRSRLPNDEVRT 309
            MAGAGIHPYHQQW                                 +D  +R P DE+RT
Sbjct: 1    MAGAGIHPYHQQWPPAGAPPPPAAVSSAAPPHPPPIHHHPPPPPVLVDNHNRPPYDELRT 60

Query: 310  IFISGLPEDVKERELLNLLRWLPGYEASQVNFKGEHPMGFALFSTPQLAVAAKDALQDMV 489
            IFI+GLP+DVKERELLNLLRWLPGYEASQVNFKGE PMGFALFST Q A+AAKD LQ MV
Sbjct: 61   IFIAGLPDDVKERELLNLLRWLPGYEASQVNFKGEKPMGFALFSTAQFAMAAKDTLQHMV 120

Query: 490  FDTESNSVLHIEMAKKNLFVKRGIVADSNAYDQSKRMRTGGDYTHTAYXXXXXXXXXXXX 669
            FD ES SV+H EMAKKNLFVKRGIV DSNAYDQSKR+RTGGD TH+ Y            
Sbjct: 121  FDAESKSVIHTEMAKKNLFVKRGIVGDSNAYDQSKRLRTGGDCTHSVY-SPSPFHPPPPP 179

Query: 670  VWG-PHGXXXXXXXXXXXXXGYXXXXXXXXXXXXXXXXXXXXXXQNTKDNPPCNTLFXXX 846
            VWG PHG             GY                      QN KDNPPCNTLF   
Sbjct: 180  VWGPPHGYMAPAPPPYDPYAGYHAPPVPMPTPPPIAAPSSYVPVQNIKDNPPCNTLFIGN 239

Query: 847  XXXXXXXXXXXXXFSVQPGFKQMKVLRQERHTVCFIEFEDVNTATNVHHTLQGAVIPSSG 1026
                          S QPGFKQMK+LRQERHTVCFIEFEDVN+ATNVHH LQGAVIPSSG
Sbjct: 240  LGENINEEELRSLLSAQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNLQGAVIPSSG 299

Query: 1027 SVGMRIQYSKNPFG 1068
            S+GMRIQYSKNP+G
Sbjct: 300  SIGMRIQYSKNPYG 313


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