BLASTX nr result
ID: Cephaelis21_contig00004720
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00004720 (1135 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 57 9e-17 ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP... 57 9e-17 ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding prote... 58 1e-16 ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding prote... 58 1e-16 ref|XP_002313332.1| predicted protein [Populus trichocarpa] gi|2... 57 1e-16 >ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein RBP47B'-like [Cucumis sativus] Length = 427 Score = 57.4 bits (137), Expect(2) = 9e-17 Identities = 34/66 (51%), Positives = 39/66 (59%), Gaps = 10/66 (15%) Frame = +3 Query: 966 FGSRER*PDAEHEHYIFVGDSALDVTNLV----------SVRAAKIFSDPNTAWPKKYDS 1115 FG ER PDA EH IFVGD A DVT+ + SVR AK+ +DPNT K Y Sbjct: 100 FGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGF 159 Query: 1116 VKFADQ 1133 VKFAD+ Sbjct: 160 VKFADE 165 Score = 56.6 bits (135), Expect(2) = 9e-17 Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 5/52 (9%) Frame = +1 Query: 835 VVWNKITG*PKGFGFIEFTSHAIYKRILQL*NGTQL-----NFRLKWEFLGV 975 ++ NKITG P+G+GF+EF SHA +RILQ NGTQ+ FRL W G+ Sbjct: 51 IIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGI 102 >ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis sativus] Length = 422 Score = 57.4 bits (137), Expect(2) = 9e-17 Identities = 34/66 (51%), Positives = 39/66 (59%), Gaps = 10/66 (15%) Frame = +3 Query: 966 FGSRER*PDAEHEHYIFVGDSALDVTNLV----------SVRAAKIFSDPNTAWPKKYDS 1115 FG ER PDA EH IFVGD A DVT+ + SVR AK+ +DPNT K Y Sbjct: 100 FGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGF 159 Query: 1116 VKFADQ 1133 VKFAD+ Sbjct: 160 VKFADE 165 Score = 56.6 bits (135), Expect(2) = 9e-17 Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 5/52 (9%) Frame = +1 Query: 835 VVWNKITG*PKGFGFIEFTSHAIYKRILQL*NGTQL-----NFRLKWEFLGV 975 ++ NKITG P+G+GF+EF SHA +RILQ NGTQ+ FRL W G+ Sbjct: 51 IIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGI 102 >ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform 1 [Glycine max] Length = 419 Score = 58.2 bits (139), Expect(2) = 1e-16 Identities = 34/66 (51%), Positives = 40/66 (60%), Gaps = 10/66 (15%) Frame = +3 Query: 966 FGSRER*PDAEHEHYIFVGDSALDVTNLV----------SVRAAKIFSDPNTAWPKKYDS 1115 FG ER PDA EH IFVGD A DVT+ + SVR AK+ +DPNTA K Y Sbjct: 94 FGIGERRPDAAPEHSIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPNTARSKGYGF 153 Query: 1116 VKFADQ 1133 VKF+D+ Sbjct: 154 VKFSDE 159 Score = 55.5 bits (132), Expect(2) = 1e-16 Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 5/52 (9%) Frame = +1 Query: 835 VVWNKITG*PKGFGFIEFTSHAIYKRILQL*NGTQL-----NFRLKWEFLGV 975 ++ NK+TG P+G+GF+EF SHA +R+LQ NGTQ+ FRL W G+ Sbjct: 45 IIRNKLTGQPEGYGFVEFVSHAAAERVLQTYNGTQMPATDQTFRLNWASFGI 96 >ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform 2 [Glycine max] Length = 410 Score = 58.2 bits (139), Expect(2) = 1e-16 Identities = 34/66 (51%), Positives = 40/66 (60%), Gaps = 10/66 (15%) Frame = +3 Query: 966 FGSRER*PDAEHEHYIFVGDSALDVTNLV----------SVRAAKIFSDPNTAWPKKYDS 1115 FG ER PDA EH IFVGD A DVT+ + SVR AK+ +DPNTA K Y Sbjct: 94 FGIGERRPDAAPEHSIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPNTARSKGYGF 153 Query: 1116 VKFADQ 1133 VKF+D+ Sbjct: 154 VKFSDE 159 Score = 55.5 bits (132), Expect(2) = 1e-16 Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 5/52 (9%) Frame = +1 Query: 835 VVWNKITG*PKGFGFIEFTSHAIYKRILQL*NGTQL-----NFRLKWEFLGV 975 ++ NK+TG P+G+GF+EF SHA +R+LQ NGTQ+ FRL W G+ Sbjct: 45 IIRNKLTGQPEGYGFVEFVSHAAAERVLQTYNGTQMPATDQTFRLNWASFGI 96 >ref|XP_002313332.1| predicted protein [Populus trichocarpa] gi|222849740|gb|EEE87287.1| predicted protein [Populus trichocarpa] Length = 415 Score = 57.4 bits (137), Expect(2) = 1e-16 Identities = 34/66 (51%), Positives = 39/66 (59%), Gaps = 10/66 (15%) Frame = +3 Query: 966 FGSRER*PDAEHEHYIFVGDSALDVTNLV----------SVRAAKIFSDPNTAWPKKYDS 1115 FG ER PDA EH IFVGD A DVT+ + SVR AK+ +DPNT K Y Sbjct: 100 FGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRVHYPSVRGAKVVTDPNTGRSKGYGF 159 Query: 1116 VKFADQ 1133 VKFAD+ Sbjct: 160 VKFADE 165 Score = 55.8 bits (133), Expect(2) = 1e-16 Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 5/52 (9%) Frame = +1 Query: 835 VVWNKITG*PKGFGFIEFTSHAIYKRILQL*NGTQL-----NFRLKWEFLGV 975 ++ NK+TG P+G+GF+EF SHA +RILQ NGTQ+ FRL W G+ Sbjct: 51 IIRNKLTGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGI 102