BLASTX nr result

ID: Cephaelis21_contig00004720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00004720
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylat...    57   9e-17
ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP...    57   9e-17
ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding prote...    58   1e-16
ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding prote...    58   1e-16
ref|XP_002313332.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-16

>ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
            RBP47B'-like [Cucumis sativus]
          Length = 427

 Score = 57.4 bits (137), Expect(2) = 9e-17
 Identities = 34/66 (51%), Positives = 39/66 (59%), Gaps = 10/66 (15%)
 Frame = +3

Query: 966  FGSRER*PDAEHEHYIFVGDSALDVTNLV----------SVRAAKIFSDPNTAWPKKYDS 1115
            FG  ER PDA  EH IFVGD A DVT+ +          SVR AK+ +DPNT   K Y  
Sbjct: 100  FGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGF 159

Query: 1116 VKFADQ 1133
            VKFAD+
Sbjct: 160  VKFADE 165



 Score = 56.6 bits (135), Expect(2) = 9e-17
 Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 5/52 (9%)
 Frame = +1

Query: 835 VVWNKITG*PKGFGFIEFTSHAIYKRILQL*NGTQL-----NFRLKWEFLGV 975
           ++ NKITG P+G+GF+EF SHA  +RILQ  NGTQ+      FRL W   G+
Sbjct: 51  IIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGI 102


>ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
            sativus]
          Length = 422

 Score = 57.4 bits (137), Expect(2) = 9e-17
 Identities = 34/66 (51%), Positives = 39/66 (59%), Gaps = 10/66 (15%)
 Frame = +3

Query: 966  FGSRER*PDAEHEHYIFVGDSALDVTNLV----------SVRAAKIFSDPNTAWPKKYDS 1115
            FG  ER PDA  EH IFVGD A DVT+ +          SVR AK+ +DPNT   K Y  
Sbjct: 100  FGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGF 159

Query: 1116 VKFADQ 1133
            VKFAD+
Sbjct: 160  VKFADE 165



 Score = 56.6 bits (135), Expect(2) = 9e-17
 Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 5/52 (9%)
 Frame = +1

Query: 835 VVWNKITG*PKGFGFIEFTSHAIYKRILQL*NGTQL-----NFRLKWEFLGV 975
           ++ NKITG P+G+GF+EF SHA  +RILQ  NGTQ+      FRL W   G+
Sbjct: 51  IIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGI 102


>ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            1 [Glycine max]
          Length = 419

 Score = 58.2 bits (139), Expect(2) = 1e-16
 Identities = 34/66 (51%), Positives = 40/66 (60%), Gaps = 10/66 (15%)
 Frame = +3

Query: 966  FGSRER*PDAEHEHYIFVGDSALDVTNLV----------SVRAAKIFSDPNTAWPKKYDS 1115
            FG  ER PDA  EH IFVGD A DVT+ +          SVR AK+ +DPNTA  K Y  
Sbjct: 94   FGIGERRPDAAPEHSIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPNTARSKGYGF 153

Query: 1116 VKFADQ 1133
            VKF+D+
Sbjct: 154  VKFSDE 159



 Score = 55.5 bits (132), Expect(2) = 1e-16
 Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 5/52 (9%)
 Frame = +1

Query: 835 VVWNKITG*PKGFGFIEFTSHAIYKRILQL*NGTQL-----NFRLKWEFLGV 975
           ++ NK+TG P+G+GF+EF SHA  +R+LQ  NGTQ+      FRL W   G+
Sbjct: 45  IIRNKLTGQPEGYGFVEFVSHAAAERVLQTYNGTQMPATDQTFRLNWASFGI 96


>ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            2 [Glycine max]
          Length = 410

 Score = 58.2 bits (139), Expect(2) = 1e-16
 Identities = 34/66 (51%), Positives = 40/66 (60%), Gaps = 10/66 (15%)
 Frame = +3

Query: 966  FGSRER*PDAEHEHYIFVGDSALDVTNLV----------SVRAAKIFSDPNTAWPKKYDS 1115
            FG  ER PDA  EH IFVGD A DVT+ +          SVR AK+ +DPNTA  K Y  
Sbjct: 94   FGIGERRPDAAPEHSIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPNTARSKGYGF 153

Query: 1116 VKFADQ 1133
            VKF+D+
Sbjct: 154  VKFSDE 159



 Score = 55.5 bits (132), Expect(2) = 1e-16
 Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 5/52 (9%)
 Frame = +1

Query: 835 VVWNKITG*PKGFGFIEFTSHAIYKRILQL*NGTQL-----NFRLKWEFLGV 975
           ++ NK+TG P+G+GF+EF SHA  +R+LQ  NGTQ+      FRL W   G+
Sbjct: 45  IIRNKLTGQPEGYGFVEFVSHAAAERVLQTYNGTQMPATDQTFRLNWASFGI 96


>ref|XP_002313332.1| predicted protein [Populus trichocarpa] gi|222849740|gb|EEE87287.1|
            predicted protein [Populus trichocarpa]
          Length = 415

 Score = 57.4 bits (137), Expect(2) = 1e-16
 Identities = 34/66 (51%), Positives = 39/66 (59%), Gaps = 10/66 (15%)
 Frame = +3

Query: 966  FGSRER*PDAEHEHYIFVGDSALDVTNLV----------SVRAAKIFSDPNTAWPKKYDS 1115
            FG  ER PDA  EH IFVGD A DVT+ +          SVR AK+ +DPNT   K Y  
Sbjct: 100  FGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRVHYPSVRGAKVVTDPNTGRSKGYGF 159

Query: 1116 VKFADQ 1133
            VKFAD+
Sbjct: 160  VKFADE 165



 Score = 55.8 bits (133), Expect(2) = 1e-16
 Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 5/52 (9%)
 Frame = +1

Query: 835 VVWNKITG*PKGFGFIEFTSHAIYKRILQL*NGTQL-----NFRLKWEFLGV 975
           ++ NK+TG P+G+GF+EF SHA  +RILQ  NGTQ+      FRL W   G+
Sbjct: 51  IIRNKLTGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGI 102


Top