BLASTX nr result

ID: Cephaelis21_contig00004717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00004717
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   243   3e-62
emb|CBI25341.3| unnamed protein product [Vitis vinifera]              241   1e-61
emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]   241   1e-61
ref|XP_002329205.1| hypothetical protein POPTRDRAFT_266879 [Popu...   216   3e-54
ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago t...   209   2e-52

>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
          Length = 1704

 Score =  243 bits (619), Expect = 3e-62
 Identities = 129/181 (71%), Positives = 143/181 (79%), Gaps = 2/181 (1%)
 Frame = -2

Query: 611  SYVRMKGGRKSHIAISHFRGQNNEIMGDGKRENKQTESD--FVQVLLLLIQHGANGLNLL 438
            +YVRMKGGRKSH+AISHFR Q     G+G+   +Q E +  FVQVLLLLIQHGANGLNLL
Sbjct: 1511 TYVRMKGGRKSHVAISHFRRQRTSAEGNGQTHAQQPEPEPEFVQVLLLLIQHGANGLNLL 1570

Query: 437  EAQHVILVEPLLNPAAEAQAIGRVHRIGQEKKTLVHRFIVKDTVEESIYKLNRSRNTGLF 258
            EAQHV+LVEPLLNPAAEAQAI RVHRIGQE +TLVHRFIVKDTVEESIYKLNRSRNT  F
Sbjct: 1571 EAQHVVLVEPLLNPAAEAQAISRVHRIGQENRTLVHRFIVKDTVEESIYKLNRSRNTNSF 1630

Query: 257  ISGNRKNQDQPVLTLKDVESLFRVVPSSAETEEQKLNRSLSRLPXXXXXXXXAERRLMES 78
            ISGN KNQDQP+LTLKD+E+LF  VPSS    E+K   SL  LP        AERRL E+
Sbjct: 1631 ISGNTKNQDQPLLTLKDLEALFTPVPSSVPQSEEKPTGSLMHLPPSVAAAIAAERRLKET 1690

Query: 77   K 75
            +
Sbjct: 1691 E 1691


>emb|CBI25341.3| unnamed protein product [Vitis vinifera]
          Length = 1717

 Score =  241 bits (614), Expect = 1e-61
 Identities = 128/179 (71%), Positives = 141/179 (78%), Gaps = 2/179 (1%)
 Frame = -2

Query: 611  SYVRMKGGRKSHIAISHFRGQNNEIMGDGKRENKQTESD--FVQVLLLLIQHGANGLNLL 438
            +YVRMKGGRKSH+AISHFR Q     G+G+   +Q E +  FVQVLLLLIQHGANGLNLL
Sbjct: 1536 TYVRMKGGRKSHVAISHFRRQRTSAEGNGQTHAQQPEPEPEFVQVLLLLIQHGANGLNLL 1595

Query: 437  EAQHVILVEPLLNPAAEAQAIGRVHRIGQEKKTLVHRFIVKDTVEESIYKLNRSRNTGLF 258
            EAQHV+LVEPLLNPAAEAQAI RVHRIGQE +TLVHRFIVKDTVEESIYKLNRSRNT  F
Sbjct: 1596 EAQHVVLVEPLLNPAAEAQAISRVHRIGQENRTLVHRFIVKDTVEESIYKLNRSRNTNSF 1655

Query: 257  ISGNRKNQDQPVLTLKDVESLFRVVPSSAETEEQKLNRSLSRLPXXXXXXXXAERRLME 81
            ISGN KNQDQP+LTLKD+E+LF  VPSS    E+K   SL  LP        AERRL +
Sbjct: 1656 ISGNTKNQDQPLLTLKDLEALFTPVPSSVPQSEEKPTGSLMHLPPSVAAAIAAERRLKQ 1714


>emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]
          Length = 2416

 Score =  241 bits (614), Expect = 1e-61
 Identities = 128/179 (71%), Positives = 141/179 (78%), Gaps = 2/179 (1%)
 Frame = -2

Query: 611  SYVRMKGGRKSHIAISHFRGQNNEIMGDGKRENKQTESD--FVQVLLLLIQHGANGLNLL 438
            +YVRMKGGRKSH+AISHFR Q     G+G+   +Q E +  FVQVLLLLIQHGANGLNLL
Sbjct: 2235 TYVRMKGGRKSHVAISHFRRQRTSAEGNGQTHAQQPEPEPEFVQVLLLLIQHGANGLNLL 2294

Query: 437  EAQHVILVEPLLNPAAEAQAIGRVHRIGQEKKTLVHRFIVKDTVEESIYKLNRSRNTGLF 258
            EAQHV+LVEPLLNPAAEAQAI RVHRIGQE +TLVHRFIVKDTVEESIYKLNRSRNT  F
Sbjct: 2295 EAQHVVLVEPLLNPAAEAQAISRVHRIGQENRTLVHRFIVKDTVEESIYKLNRSRNTNSF 2354

Query: 257  ISGNRKNQDQPVLTLKDVESLFRVVPSSAETEEQKLNRSLSRLPXXXXXXXXAERRLME 81
            ISGN KNQDQP+LTLKD+E+LF  VPSS    E+K   SL  LP        AERRL +
Sbjct: 2355 ISGNTKNQDQPLLTLKDLEALFTPVPSSVPQSEEKPTGSLMHLPPSVAAAIAAERRLKQ 2413


>ref|XP_002329205.1| hypothetical protein POPTRDRAFT_266879 [Populus trichocarpa]
           gi|222870986|gb|EEF08117.1| hypothetical protein
           POPTRDRAFT_266879 [Populus trichocarpa]
          Length = 166

 Score =  216 bits (550), Expect = 3e-54
 Identities = 115/169 (68%), Positives = 130/169 (76%)
 Frame = -2

Query: 587 RKSHIAISHFRGQNNEIMGDGKRENKQTESDFVQVLLLLIQHGANGLNLLEAQHVILVEP 408
           RKSH+AIS FR QN+      +   +Q E+  +QVLLLLIQHGANGLNLLEAQHV+LVEP
Sbjct: 1   RKSHVAISEFRAQNSS---PKRTHRQQQETKSIQVLLLLIQHGANGLNLLEAQHVVLVEP 57

Query: 407 LLNPAAEAQAIGRVHRIGQEKKTLVHRFIVKDTVEESIYKLNRSRNTGLFISGNRKNQDQ 228
           LLNPAAEAQA+ RVHRIGQE++TLVHRFIVKDTVEESIYKLNRSR+T  FISGN KNQDQ
Sbjct: 58  LLNPAAEAQAVSRVHRIGQEQRTLVHRFIVKDTVEESIYKLNRSRSTSSFISGNTKNQDQ 117

Query: 227 PVLTLKDVESLFRVVPSSAETEEQKLNRSLSRLPXXXXXXXXAERRLME 81
           P+LTLKDVESLF  VPS+    + K   +L  LP        AERRL E
Sbjct: 118 PLLTLKDVESLFATVPSTVPESDGKPTENLRHLPPSVAAALAAERRLKE 166


>ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago truncatula]
            gi|355516770|gb|AES98393.1| ATP-dependent helicase,
            putative [Medicago truncatula]
          Length = 1764

 Score =  209 bits (533), Expect = 2e-52
 Identities = 117/182 (64%), Positives = 133/182 (73%), Gaps = 3/182 (1%)
 Frame = -2

Query: 611  SYVRMKGGRKSHIAISHFRGQNNEIMGDGKRENKQTESDFVQVLLLLIQHGANGLNLLEA 432
            ++VRMKGGRK+H AIS FRG  N     G +  +  E   +QVLLLLIQHGANGLNLLEA
Sbjct: 1587 TFVRMKGGRKAHTAISQFRGIQN-----GTKGCEGEEPISIQVLLLLIQHGANGLNLLEA 1641

Query: 431  QHVILVEPLLNPAAEAQAIGRVHRIGQEKKTLVHRFIVKDTVEESIYKLNRSRNTGLFIS 252
            QHV+LVEPLLNPAAEAQAI RVHRIGQ++KTL+HRF+VKDTVEESIYKLNRSR+  LFIS
Sbjct: 1642 QHVVLVEPLLNPAAEAQAISRVHRIGQKQKTLIHRFLVKDTVEESIYKLNRSRSNHLFIS 1701

Query: 251  GNRKNQDQPVLTLKDVESLFRVVPSSA---ETEEQKLNRSLSRLPXXXXXXXXAERRLME 81
            GN KNQDQPVLTLKDVESL    P +A   +      N +L  LP        AERR  E
Sbjct: 1702 GNTKNQDQPVLTLKDVESLLARAPITAPEIDENPNNTNTNLRDLPPSLAAAIAAERRYNE 1761

Query: 80   SK 75
             +
Sbjct: 1762 HR 1763


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