BLASTX nr result

ID: Cephaelis21_contig00004685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00004685
         (892 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36128.3| unnamed protein product [Vitis vinifera]              156   5e-36
ref|XP_002284468.1| PREDICTED: 30S ribosomal protein S17, chloro...   156   5e-36
ref|XP_004141765.1| PREDICTED: 30S ribosomal protein S17, chloro...   154   2e-35
ref|XP_002298222.1| predicted protein [Populus trichocarpa] gi|2...   150   5e-34
ref|XP_002887857.1| hypothetical protein ARALYDRAFT_477281 [Arab...   149   1e-33

>emb|CBI36128.3| unnamed protein product [Vitis vinifera]
          Length = 189

 Score =  156 bits (395), Expect = 5e-36
 Identities = 89/144 (61%), Positives = 99/144 (68%)
 Frame = -3

Query: 806 LSQFKSLTLATPFLHGSTPISFLSDPSSSPPARLSSFPAILPPIRAMKSMQGRVVCATSD 627
           +S  +SL L TPFLHGS+ +S LS PSS+  A     P  LPPIRAMKSMQGRVVCATSD
Sbjct: 45  MSLLQSLKLTTPFLHGSSNLSLLSKPSSTSLASPPPPPTFLPPIRAMKSMQGRVVCATSD 104

Query: 626 KTVAVEVTRLAQDPXXXXXXXXXXXYQAHDPLNQFKVGDFVQLEKSRPISKTKTFVAVAV 447
           KTVAVEV RLA  P           YQAHDP NQFKVGD VQLEKSRPISKTKTFVA+ V
Sbjct: 105 KTVAVEVVRLAPHPKYKRRVRKKKKYQAHDPDNQFKVGDVVQLEKSRPISKTKTFVAIPV 164

Query: 446 PPRNVPKAKLVVPPELGQLSQSEQ 375
           P RN  K++     EL    +S+Q
Sbjct: 165 PNRNRAKSQEAAAGELEIPLESQQ 188


>ref|XP_002284468.1| PREDICTED: 30S ribosomal protein S17, chloroplastic-like [Vitis
           vinifera]
          Length = 145

 Score =  156 bits (395), Expect = 5e-36
 Identities = 89/144 (61%), Positives = 99/144 (68%)
 Frame = -3

Query: 806 LSQFKSLTLATPFLHGSTPISFLSDPSSSPPARLSSFPAILPPIRAMKSMQGRVVCATSD 627
           +S  +SL L TPFLHGS+ +S LS PSS+  A     P  LPPIRAMKSMQGRVVCATSD
Sbjct: 1   MSLLQSLKLTTPFLHGSSNLSLLSKPSSTSLASPPPPPTFLPPIRAMKSMQGRVVCATSD 60

Query: 626 KTVAVEVTRLAQDPXXXXXXXXXXXYQAHDPLNQFKVGDFVQLEKSRPISKTKTFVAVAV 447
           KTVAVEV RLA  P           YQAHDP NQFKVGD VQLEKSRPISKTKTFVA+ V
Sbjct: 61  KTVAVEVVRLAPHPKYKRRVRKKKKYQAHDPDNQFKVGDVVQLEKSRPISKTKTFVAIPV 120

Query: 446 PPRNVPKAKLVVPPELGQLSQSEQ 375
           P RN  K++     EL    +S+Q
Sbjct: 121 PNRNRAKSQEAAAGELEIPLESQQ 144


>ref|XP_004141765.1| PREDICTED: 30S ribosomal protein S17, chloroplastic-like [Cucumis
           sativus] gi|449519627|ref|XP_004166836.1| PREDICTED: 30S
           ribosomal protein S17, chloroplastic-like [Cucumis
           sativus]
          Length = 164

 Score =  154 bits (390), Expect = 2e-35
 Identities = 91/164 (55%), Positives = 109/164 (66%), Gaps = 3/164 (1%)
 Frame = -3

Query: 851 ISPTMAVSSPLLRLPLSQFKSLTLATPFLHGSTPISFLSDPSSSPPARLSSFPAILPPIR 672
           +S T+  SS L   P+   K L++++ FLHGSTP+SFLS PSSS     S  P  LP IR
Sbjct: 1   MSITLTSSSLLQIPPVQSLKKLSISSSFLHGSTPLSFLSKPSSSSSPFPSQTPNFLPSIR 60

Query: 671 AMKSMQGRVVCATSDKTVAVEVTRLAQDPXXXXXXXXXXXYQAHDPLNQFKVGDFVQLEK 492
           AM+S+QGRVVCAT+DKTVAVEV RLA  P           YQAHDP NQF+VGDFV+LEK
Sbjct: 61  AMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFQVGDFVELEK 120

Query: 491 SRPISKTKTFVAVAVPPRNVPKAKLVVPPELGQLS---QSEQHQ 369
            RPISK KTF+A+ VP RN  K K V   E G+L    +S+Q Q
Sbjct: 121 CRPISKMKTFLAIPVPARN-SKKKAVEGGEGGELGIPLESQQEQ 163


>ref|XP_002298222.1| predicted protein [Populus trichocarpa] gi|222845480|gb|EEE83027.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  150 bits (378), Expect = 5e-34
 Identities = 82/128 (64%), Positives = 92/128 (71%)
 Frame = -3

Query: 803 SQFKSLTLATPFLHGSTPISFLSDPSSSPPARLSSFPAILPPIRAMKSMQGRVVCATSDK 624
           S   SLTL+TPFLHG+T +S LS P+SS   R +     LPPIRAMKS+QG+VVCATSDK
Sbjct: 9   SSLNSLTLSTPFLHGTTQLSHLSKPTSSLTLRPAKPFTFLPPIRAMKSLQGKVVCATSDK 68

Query: 623 TVAVEVTRLAQDPXXXXXXXXXXXYQAHDPLNQFKVGDFVQLEKSRPISKTKTFVAVAVP 444
           TVAVEVTRLA  P           YQAHDP NQFKVGD VQLEKSRPISKTK+F+AV VP
Sbjct: 69  TVAVEVTRLAPHPKYKRRVRKKKKYQAHDPENQFKVGDLVQLEKSRPISKTKSFLAVPVP 128

Query: 443 PRNVPKAK 420
            R   + K
Sbjct: 129 ARKKKEKK 136


>ref|XP_002887857.1| hypothetical protein ARALYDRAFT_477281 [Arabidopsis lyrata subsp.
           lyrata] gi|297333698|gb|EFH64116.1| hypothetical protein
           ARALYDRAFT_477281 [Arabidopsis lyrata subsp. lyrata]
          Length = 148

 Score =  149 bits (375), Expect = 1e-33
 Identities = 85/143 (59%), Positives = 100/143 (69%)
 Frame = -3

Query: 803 SQFKSLTLATPFLHGSTPISFLSDPSSSPPARLSSFPAILPPIRAMKSMQGRVVCATSDK 624
           S  ++L L++PF HGSTP+S LS P+S P  R+   PA+ P IRAMK+MQGRVVCATSDK
Sbjct: 7   SSLQALKLSSPFAHGSTPLSSLSKPNSFPNHRM---PALAPVIRAMKTMQGRVVCATSDK 63

Query: 623 TVAVEVTRLAQDPXXXXXXXXXXXYQAHDPLNQFKVGDFVQLEKSRPISKTKTFVAVAVP 444
           TVAVEVTRLA  P           YQAHDP NQFKVGD V+LEKSRPISKTK+FVA+ V 
Sbjct: 64  TVAVEVTRLAPHPKYKRRVRMKKKYQAHDPDNQFKVGDVVRLEKSRPISKTKSFVALPVV 123

Query: 443 PRNVPKAKLVVPPELGQLSQSEQ 375
           PR   KA+      LG   +S+Q
Sbjct: 124 PRAARKAEAGAGDLLGIPLESQQ 146


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