BLASTX nr result

ID: Cephaelis21_contig00004639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00004639
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171005.1| PREDICTED: LOW QUALITY PROTEIN: TPR repeat-c...    70   2e-10
ref|XP_004146029.1| PREDICTED: TPR repeat-containing thioredoxin...    70   2e-10
ref|XP_002283097.2| PREDICTED: TPR repeat-containing thioredoxin...    63   3e-08
ref|XP_002317465.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_004171005.1| PREDICTED: LOW QUALITY PROTEIN: TPR repeat-containing thioredoxin
           TTL1-like [Cucumis sativus]
          Length = 698

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 48/121 (39%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
 Frame = +1

Query: 58  MAHSGKPMSEIGLDSLNDRLRQSLSCIEXXXXXXXXXXXXRELDLGSPVSPXXXXXXXXX 237
           M+HSG P+S++  D L+DR R S+SC              RELDLGSPVSP         
Sbjct: 1   MSHSGNPISDLRFDHLSDRFRDSVSC-------EVNKPDFRELDLGSPVSP--------L 45

Query: 238 XXXXXXXXXXXXXXXXXXXXXISGRNGQGPVMKKSDS---NHSGEL--SAESSPTGGRGF 402
                                +SGRNG  PV K+SDS   NHSGEL  S+ESSPT     
Sbjct: 46  RTRHQTGGGPAASSSSSSSGSVSGRNGPNPVAKRSDSGPNNHSGELSGSSESSPTAAESL 105

Query: 403 K 405
           +
Sbjct: 106 R 106


>ref|XP_004146029.1| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Cucumis
           sativus]
          Length = 698

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 48/121 (39%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
 Frame = +1

Query: 58  MAHSGKPMSEIGLDSLNDRLRQSLSCIEXXXXXXXXXXXXRELDLGSPVSPXXXXXXXXX 237
           M+HSG P+S++  D L+DR R S+SC              RELDLGSPVSP         
Sbjct: 1   MSHSGNPISDLRFDHLSDRFRDSVSC-------EVNKPDFRELDLGSPVSP--------L 45

Query: 238 XXXXXXXXXXXXXXXXXXXXXISGRNGQGPVMKKSDS---NHSGEL--SAESSPTGGRGF 402
                                +SGRNG  PV K+SDS   NHSGEL  S+ESSPT     
Sbjct: 46  RTRHQTGGGPAASSSSSSSGSVSGRNGPNPVAKRSDSGPNNHSGELSGSSESSPTAAESL 105

Query: 403 K 405
           +
Sbjct: 106 R 106


>ref|XP_002283097.2| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Vitis
           vinifera]
          Length = 656

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 49/131 (37%), Positives = 63/131 (48%), Gaps = 14/131 (10%)
 Frame = +1

Query: 58  MAHSGKPMSEIGLDSLNDRLRQSLSCIEXXXXXXXXXXXXRELDLGSPVSPXXXXXXXXX 237
           M+HSGKPMSE+GL ++ DR R++L+C              +ELDLGSPVSP         
Sbjct: 1   MSHSGKPMSEVGLGAVADRFRETLNC-------DNNKPDFKELDLGSPVSP-----LRTR 48

Query: 238 XXXXXXXXXXXXXXXXXXXXXISGRNGQGPVMKKSD---SNHSGEL--SAESSPT----- 387
                                +S RN    + K++D   +NHSGEL  S+ESSPT     
Sbjct: 49  RSGPAGSGVTTTSSSSSSSGSVSCRNANNQLAKRADGAGNNHSGELSGSSESSPTAAESV 108

Query: 388 --GG--RGFKP 408
             GG  R FKP
Sbjct: 109 RSGGASRNFKP 119


>ref|XP_002317465.1| predicted protein [Populus trichocarpa] gi|222860530|gb|EEE98077.1|
           predicted protein [Populus trichocarpa]
          Length = 698

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 45/119 (37%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
 Frame = +1

Query: 58  MAHSGKPM---SEIGLDSLNDRLRQSLSCIEXXXXXXXXXXXXRELDLGSPVSPXXXXXX 228
           M+HS KP      + L+SL D+LR SLS  E            RELDLGSPVSP      
Sbjct: 2   MSHSPKPSIGGGNLDLNSLTDQLRDSLSSFEANKPDF------RELDLGSPVSPLRTRGG 55

Query: 229 XXXXXXXXXXXXXXXXXXXXXXXXISG--RNGQGPVMKKSDSNHSGEL--SAESSPTGG 393
                                    SG     Q P+ K ++SNHSGEL  S+ESSPT G
Sbjct: 56  LITTTTATATAATTTTTTTSSSSSSSGSASGAQNPLHKPNNSNHSGELSNSSESSPTAG 114


Top