BLASTX nr result

ID: Cephaelis21_contig00004583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00004583
         (1716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40282.1| unknown [Medicago truncatula]                          119   2e-24
ref|XP_003589418.1| Polyadenylate-binding protein [Medicago trun...   119   2e-24
ref|XP_004145899.1| PREDICTED: probable RNA-binding protein 18-l...   113   2e-22
ref|XP_002513659.1| conserved hypothetical protein [Ricinus comm...   113   2e-22
emb|CBI22666.3| unnamed protein product [Vitis vinifera]              112   3e-22

>gb|AFK40282.1| unknown [Medicago truncatula]
          Length = 157

 Score =  119 bits (298), Expect = 2e-24
 Identities = 52/68 (76%), Positives = 61/68 (89%)
 Frame = -1

Query: 231 MDLNHSFDDKCESRLYVGNLDLRITETALINMFNPFGKIVSEDFLWHTRGPKHGEPRGYA 52
           MDLN S DDKCE+RLYVGNLDLRITE  L+ MF+P+GKI+SEDFLWHTRGPK GEPRG+A
Sbjct: 1   MDLNGSVDDKCENRLYVGNLDLRITEATLLKMFSPYGKIMSEDFLWHTRGPKRGEPRGFA 60

Query: 51  IVQFNTKE 28
            +Q++TKE
Sbjct: 61  FIQYSTKE 68


>ref|XP_003589418.1| Polyadenylate-binding protein [Medicago truncatula]
           gi|357473041|ref|XP_003606805.1| Polyadenylate-binding
           protein [Medicago truncatula]
           gi|355478466|gb|AES59669.1| Polyadenylate-binding
           protein [Medicago truncatula]
           gi|355507860|gb|AES89002.1| Polyadenylate-binding
           protein [Medicago truncatula]
          Length = 157

 Score =  119 bits (298), Expect = 2e-24
 Identities = 52/68 (76%), Positives = 61/68 (89%)
 Frame = -1

Query: 231 MDLNHSFDDKCESRLYVGNLDLRITETALINMFNPFGKIVSEDFLWHTRGPKHGEPRGYA 52
           MDLN S DDKCE+RLYVGNLDLRITE  L+ MF+P+GKI+SEDFLWHTRGPK GEPRG+A
Sbjct: 1   MDLNGSVDDKCENRLYVGNLDLRITEATLLKMFSPYGKIMSEDFLWHTRGPKRGEPRGFA 60

Query: 51  IVQFNTKE 28
            +Q++TKE
Sbjct: 61  FIQYSTKE 68


>ref|XP_004145899.1| PREDICTED: probable RNA-binding protein 18-like [Cucumis sativus]
           gi|449497265|ref|XP_004160356.1| PREDICTED: probable
           RNA-binding protein 18-like [Cucumis sativus]
          Length = 171

 Score =  113 bits (282), Expect = 2e-22
 Identities = 48/68 (70%), Positives = 60/68 (88%)
 Frame = -1

Query: 231 MDLNHSFDDKCESRLYVGNLDLRITETALINMFNPFGKIVSEDFLWHTRGPKHGEPRGYA 52
           MD N   D+KCES+LY+GNLDLRITE ALI +F+PFGKI+SEDFLWHTRGPK GEPRG+A
Sbjct: 1   MDSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFA 60

Query: 51  IVQFNTKE 28
            +++++KE
Sbjct: 61  FIEYSSKE 68


>ref|XP_002513659.1| conserved hypothetical protein [Ricinus communis]
           gi|223547567|gb|EEF49062.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 170

 Score =  113 bits (282), Expect = 2e-22
 Identities = 52/67 (77%), Positives = 58/67 (86%)
 Frame = -1

Query: 228 DLNHSFDDKCESRLYVGNLDLRITETALINMFNPFGKIVSEDFLWHTRGPKHGEPRGYAI 49
           D N   D+K ES+LYVGNLDLRITE ALI MF+P+GKIVSEDFLWHTRGPK GEPRG+A 
Sbjct: 3   DSNGFIDEKAESKLYVGNLDLRITEAALIKMFSPYGKIVSEDFLWHTRGPKRGEPRGFAF 62

Query: 48  VQFNTKE 28
           VQF+TKE
Sbjct: 63  VQFSTKE 69


>emb|CBI22666.3| unnamed protein product [Vitis vinifera]
          Length = 188

 Score =  112 bits (280), Expect = 3e-22
 Identities = 49/71 (69%), Positives = 58/71 (81%)
 Frame = -1

Query: 240 CSFMDLNHSFDDKCESRLYVGNLDLRITETALINMFNPFGKIVSEDFLWHTRGPKHGEPR 61
           CS MD N   D KCE RL++GNLD R++E ALI MF+PFGKIV EDF+WHTRGPK GEPR
Sbjct: 16  CSIMDPNSLTDKKCECRLFIGNLDKRVSEVALIKMFSPFGKIVGEDFMWHTRGPKRGEPR 75

Query: 60  GYAIVQFNTKE 28
           G+A V+F+TKE
Sbjct: 76  GFAFVEFSTKE 86


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