BLASTX nr result

ID: Cephaelis21_contig00004541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00004541
         (2780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_565338.1| RNA helicase, ATP-dependent, SK12/DOB1 protein ...    60   2e-06
ref|XP_002883745.1| HUA enhancer 2 [Arabidopsis lyrata subsp. ly...    60   2e-06
gb|AAL11446.1| HUA enhancer 2 [Arabidopsis thaliana]                   60   2e-06
ref|XP_004169245.1| PREDICTED: superkiller viralicidic activity ...    60   4e-06
ref|XP_004152892.1| PREDICTED: superkiller viralicidic activity ...    60   4e-06

>ref|NP_565338.1| RNA helicase, ATP-dependent, SK12/DOB1 protein [Arabidopsis thaliana]
            gi|20197305|gb|AAC67203.2| expressed protein [Arabidopsis
            thaliana] gi|28973761|gb|AAO64196.1| putative DEAD/DEAH
            box RNA helicase (HUA ENHANCER2) [Arabidopsis thaliana]
            gi|330250934|gb|AEC06028.1| RNA helicase, ATP-dependent,
            SK12/DOB1 protein [Arabidopsis thaliana]
          Length = 995

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = -1

Query: 1040 QGASFAEVIQMTDIFEGSIIRLARRLDEFLNQV 942
            +GASFAE+IQMTDIFEGSIIR ARRLDEFLNQ+
Sbjct: 928  KGASFAEIIQMTDIFEGSIIRSARRLDEFLNQL 960


>ref|XP_002883745.1| HUA enhancer 2 [Arabidopsis lyrata subsp. lyrata]
            gi|297329585|gb|EFH60004.1| HUA enhancer 2 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 984

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = -1

Query: 1040 QGASFAEVIQMTDIFEGSIIRLARRLDEFLNQV 942
            +GASFAE+IQMTDIFEGSIIR ARRLDEFLNQ+
Sbjct: 917  KGASFAEIIQMTDIFEGSIIRSARRLDEFLNQL 949


>gb|AAL11446.1| HUA enhancer 2 [Arabidopsis thaliana]
          Length = 991

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = -1

Query: 1040 QGASFAEVIQMTDIFEGSIIRLARRLDEFLNQV 942
            +GASFAE+IQMTDIFEGSIIR ARRLDEFLNQ+
Sbjct: 924  KGASFAEIIQMTDIFEGSIIRSARRLDEFLNQL 956


>ref|XP_004169245.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Cucumis
            sativus]
          Length = 167

 Score = 59.7 bits (143), Expect = 4e-06
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = -1

Query: 1040 QGASFAEVIQMTDIFEGSIIRLARRLDEFLNQV 942
            +GASF+EVIQMTDIFEGSIIR ARRLDEFLNQ+
Sbjct: 100  KGASFSEVIQMTDIFEGSIIRSARRLDEFLNQL 132


>ref|XP_004152892.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Cucumis
            sativus]
          Length = 1014

 Score = 59.7 bits (143), Expect = 4e-06
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = -1

Query: 1040 QGASFAEVIQMTDIFEGSIIRLARRLDEFLNQV 942
            +GASF+EVIQMTDIFEGSIIR ARRLDEFLNQ+
Sbjct: 947  KGASFSEVIQMTDIFEGSIIRSARRLDEFLNQL 979


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