BLASTX nr result

ID: Cephaelis21_contig00004370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00004370
         (2262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|2...   288   6e-75
ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|2...   280   9e-73
ref|XP_004146763.1| PREDICTED: RNA-binding protein Musashi homol...   276   2e-71
ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258...   272   2e-70
ref|XP_002889085.1| RNA recognition motif-containing protein [Ar...   270   2e-69

>ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|222857268|gb|EEE94815.1|
            predicted protein [Populus trichocarpa]
          Length = 286

 Score =  288 bits (736), Expect = 6e-75
 Identities = 141/259 (54%), Positives = 175/259 (67%), Gaps = 14/259 (5%)
 Frame = +2

Query: 314  DTTNTKIFVGGLAWETKSDMLRRYFEPFGDILEAVVITDKHTGRSKGYGFVTFRDPESAK 493
            DTT TK+FVGGLAWET+S+ +RRYFE FGDILEAVVITDK+TGRSKGYGFVTFR+P++A+
Sbjct: 28   DTTYTKVFVGGLAWETQSETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVTFREPDAAR 87

Query: 494  RACANPSPVIDGRRANCNLASLGRPVRLLPPGNMRSASPHIRGPQTPRGLYVGNPIYQLP 673
            RACA+P+P+IDGRRANCNLASLGRP   LP G  R A+P+I   QTPRG YVG+  YQ P
Sbjct: 88   RACADPTPIIDGRRANCNLASLGRPRPPLPYGRPRPAAPYITSVQTPRGTYVGSFGYQQP 147

Query: 674  ANFGYQPGLQFSPYRYPAYGPEFFYP--------------QMYGVPGTVSPNALVYSQMG 811
             ++GYQ GL ++PY Y AYGPE+ Y               Q+YGVPGTV+     Y Q+ 
Sbjct: 148  VSYGYQQGLMYNPYGYAAYGPEYVYQQGAYNPYATGHQYLQIYGVPGTVNSGMYPYGQLS 207

Query: 812  HSPPPNLGYTPVRGYMMPNPHTLQYGRPIISGMAPEIMSAMQTPNHPGIRVPSSVPAQII 991
             + P   GYT + GY +P    +Q+G P ++ +    M  +Q P H GI       +Q I
Sbjct: 208  QNVPGGHGYTSMPGYAVPGHQIVQFGGPSVNAITTSSMPTIQAPYHTGIAAAVPAQSQFI 267

Query: 992  VPTSPPQFTQSSGSDQMAG 1048
            VP   PQ+ Q SGSDQ  G
Sbjct: 268  VPAPSPQYMQGSGSDQTTG 286


>ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|222842347|gb|EEE79894.1|
            predicted protein [Populus trichocarpa]
          Length = 287

 Score =  280 bits (717), Expect = 9e-73
 Identities = 141/260 (54%), Positives = 172/260 (66%), Gaps = 15/260 (5%)
 Frame = +2

Query: 314  DTTNTKIFVGGLAWETKSDMLRRYFEPFGDILEAVVITDKHTGRSKGYGFVTFRDPESAK 493
            DTT TK+FVGGLAWET+S+ +RRYFE FGDILEAVVITDK+TGRSKGYGFVTFR+PE+A+
Sbjct: 28   DTTYTKVFVGGLAWETQSETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVTFREPEAAR 87

Query: 494  RACANPSPVIDGRRANCNLASLGRPVRLLP-PGNMRSASPHIRGPQTPRGLYVGNPIYQL 670
            RACA+P+P+IDGRRANCNLASLGRP    P  G +R A P+I   QTPRG Y G+  YQ 
Sbjct: 88   RACADPTPMIDGRRANCNLASLGRPRPPQPYVGRLRPAPPYIASVQTPRGTYAGSFGYQQ 147

Query: 671  PANFGYQPGLQFSPYRYPAYGPEFFYP--------------QMYGVPGTVSPNALVYSQM 808
            P ++GYQ GL + PY Y AYGPE+ Y               Q+YGVPGTV+     Y Q 
Sbjct: 148  PVSYGYQQGLMYHPYGYAAYGPEYVYQQGVYNPYAAGQQYLQIYGVPGTVNTGMYPYGQF 207

Query: 809  GHSPPPNLGYTPVRGYMMPNPHTLQYGRPIISGMAPEIMSAMQTPNHPGIRVPSSVPAQI 988
            G + P   GYT ++GY +P  H +Q+G P ++ M    +  +Q P   GI        Q 
Sbjct: 208  GQNVPGGHGYTTMQGYAVPGHHIMQFGGPGVNAMTTSPLPTIQAPYPTGIAAAVPAQQQF 267

Query: 989  IVPTSPPQFTQSSGSDQMAG 1048
            IVP   PQ+  SSGSDQ  G
Sbjct: 268  IVPAPSPQYMHSSGSDQTTG 287


>ref|XP_004146763.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cucumis
            sativus] gi|449531145|ref|XP_004172548.1| PREDICTED:
            RNA-binding protein Musashi homolog 2-like [Cucumis
            sativus]
          Length = 286

 Score =  276 bits (705), Expect = 2e-71
 Identities = 141/263 (53%), Positives = 173/263 (65%), Gaps = 18/263 (6%)
 Frame = +2

Query: 314  DTTNTKIFVGGLAWETKSDMLRRYFEPFGDILEAVVITDKHTGRSKGYGFVTFRDPESAK 493
            DTT TK+FVGGLAWET+S+ +RRYFE FG+ILEAVVITDK+TGRSKGYGFVTFRDPESA+
Sbjct: 28   DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAR 87

Query: 494  RACANPSPVIDGRRANCNLASLGRPVRLLPP-----GNMRSASPHIRGPQTPRGLYVGNP 658
            RACA+P+P+IDGRRANCNLASLGRP    PP     G +R  + ++ G Q  RG Y+GN 
Sbjct: 88   RACADPTPIIDGRRANCNLASLGRP---RPPLSYGTGRLRQPAVYVGGMQPNRGTYIGNF 144

Query: 659  IYQLPANFGYQPGLQFSPYRYPAYGPEFFYP-------------QMYGVPGTVSPNALVY 799
             YQ P ++ YQ GL + PY Y  YGPE+ YP             Q+YGVPG+ SP    Y
Sbjct: 145  GYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIYHY 204

Query: 800  SQMGHSPPPNLGYTPVRGYMMPNPHTLQYGRPIISGMAPEIMSAMQTPNHPGIRVPSSVP 979
             Q+G + P   GY  V GY MP+P  LQ+  P ++ +    M  +Q P   GI  P +  
Sbjct: 205  GQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQ 264

Query: 980  AQIIVPTSPPQFTQSSGSDQMAG 1048
             Q +V  SP QF Q SGSDQ +G
Sbjct: 265  PQFVV-HSPSQFVQGSGSDQTSG 286


>ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera]
          Length = 346

 Score =  272 bits (696), Expect = 2e-70
 Identities = 135/258 (52%), Positives = 168/258 (65%), Gaps = 13/258 (5%)
 Frame = +2

Query: 314  DTTNTKIFVGGLAWETKSDMLRRYFEPFGDILEAVVITDKHTGRSKGYGFVTFRDPESAK 493
            DTT TK+FVGGLAWET+S+ +RRYFE FG+ILEAVVITDK+TGRSKGYGFVTFRDPESA+
Sbjct: 28   DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAR 87

Query: 494  RACANPSPVIDGRRANCNLASLGRPVRLLPPGNMRSASPHIRGPQTPRGLYVGNPIYQLP 673
            RAC +P+P+IDGRRANCNLASLGRP   +  G +R  +P++      RG YVGN  YQ P
Sbjct: 88   RACLDPAPIIDGRRANCNLASLGRPRPSMSYGRLRPVTPYLGSVPATRGSYVGNFGYQQP 147

Query: 674  ANFGYQPGLQFSPYRYPAYGPEFFYP-------------QMYGVPGTVSPNALVYSQMGH 814
             ++ YQ G  +  Y Y AYGPE+ YP             Q+YGVPGTV+     Y Q+G 
Sbjct: 148  VSYSYQQGFMYPSYGYAAYGPEYVYPQGVYNPYPGQQYLQIYGVPGTVNTAIYPYGQLGQ 207

Query: 815  SPPPNLGYTPVRGYMMPNPHTLQYGRPIISGMAPEIMSAMQTPNHPGIRVPSSVPAQIIV 994
            + P + GYT V+GY MP    +Q+G   ++ ++   +  +Q P   GI  P     Q IV
Sbjct: 208  TLPSSHGYTTVQGYAMPGHQFMQFGGSSVNAISTSPIPTIQAPYPTGIAAPVPAQPQFIV 267

Query: 995  PTSPPQFTQSSGSDQMAG 1048
            P   PQF Q SG DQ  G
Sbjct: 268  PAHSPQFIQGSGPDQTTG 285


>ref|XP_002889085.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
            lyrata] gi|297334926|gb|EFH65344.1| RNA recognition
            motif-containing protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 283

 Score =  270 bits (689), Expect = 2e-69
 Identities = 150/284 (52%), Positives = 179/284 (63%), Gaps = 22/284 (7%)
 Frame = +2

Query: 254  MANQMVPGXXXXXXXXXXXXDTTNTKIFVGGLAWETKSDMLRRYFEPFGDILEAVVITDK 433
            MA Q VPG            DTT TK+FVGGLAWET+S+ LRR+FE FG+ILEAVVI DK
Sbjct: 1    MAYQSVPGSGFHYLNSPFG-DTTFTKVFVGGLAWETQSETLRRHFEQFGEILEAVVIADK 59

Query: 434  HTGRSKGYGFVTFRDPESAKRACANPSPVIDGRRANCNLASLGRPVRLLP-------PGN 592
            +TGRSKGYGFVTFRDPE+A+RACA+P+P+IDGRRANCNLASLGRP   LP       PG 
Sbjct: 60   NTGRSKGYGFVTFRDPEAARRACADPTPIIDGRRANCNLASLGRPRPPLPYALIPNMPGR 119

Query: 593  MRSASPHIRGPQTPRGLYVGNPIYQLPANFGYQPGLQFSPYRYPAYGPEFFYP------- 751
            +R ASP+I   Q PRG  +GN  YQ P  + YQ G+ + PY   AYGPE+ Y        
Sbjct: 120  LRPASPYIGNVQGPRGSLIGNYPYQQPLPYNYQQGVVY-PYGVTAYGPEYMYSQSQGLYG 178

Query: 752  --------QMYGVPGTVSPNALVYSQMGHSPPPNLGYTPVRGYMMPNPHTLQYGRPIISG 907
                    Q+YGVPG V+     Y Q+  + P   GY  V+GY +P  H LQ G P +S 
Sbjct: 179  PYMGQQYLQVYGVPGAVNSPIYQYGQLSQTIPSGHGYPAVQGYSVPGSHVLQLGGPTVSA 238

Query: 908  MAPEIMSAMQTPNHPGIRVPSSVPAQIIVPTSPPQFTQSSGSDQ 1039
            M    MSA+Q P   GI  P+ V + IIV +  PQF QSSGSDQ
Sbjct: 239  MTTSSMSALQGPYPSGITGPAPVQSHIIVHS--PQFMQSSGSDQ 280


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