BLASTX nr result

ID: Cephaelis21_contig00003950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00003950
         (1212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283336.1| PREDICTED: F-box protein At3g12350 [Vitis vi...   361   2e-97
emb|CAN72848.1| hypothetical protein VITISV_013938 [Vitis vinifera]   361   2e-97
ref|XP_004142896.1| PREDICTED: F-box protein At3g12350-like [Cuc...   334   2e-89
ref|XP_002301146.1| predicted protein [Populus trichocarpa] gi|2...   278   3e-72
gb|ABK92530.1| unknown [Populus trichocarpa]                          278   3e-72

>ref|XP_002283336.1| PREDICTED: F-box protein At3g12350 [Vitis vinifera]
          Length = 469

 Score =  361 bits (927), Expect = 2e-97
 Identities = 181/307 (58%), Positives = 225/307 (73%), Gaps = 8/307 (2%)
 Frame = -3

Query: 898 MESNGITTFSFSDFPEDVQVCILSFLNQSELATFASTSKRFLSMCRHDPRLWFSMCDRRW 719
           + ++ +T+ SFSDFPEDVQ+CILSFL  SE+ATFA TSKRFLS+C  D +LWF++CDRRW
Sbjct: 4   LTTDAVTSVSFSDFPEDVQLCILSFLTPSEIATFACTSKRFLSLCTCDSKLWFTLCDRRW 63

Query: 718 GSITRINKWGNGKISYKHLYKTLHEYENLIGFWRRSG-TTLGSLKSPLVFFEWGPFYIMG 542
           GS T+I KWG+GKI+Y+ LY+TL E+ENLIGFWRRSG  TLG    PL+FFEW P +I+G
Sbjct: 64  GSKTQIKKWGSGKITYRLLYRTLIEWENLIGFWRRSGQVTLGVASPPLIFFEWCPSFIIG 123

Query: 541 SRVSPSKTGAYEVIKTPFLWISITSKGESMNYLDPDGNLELSESLVDSGELGILENEWTS 362
           SRVSPS+ G Y VIK PFL +SIT +GE+MN+LDPDG +E SE  V++ + G LEN+   
Sbjct: 124 SRVSPSRLGTYHVIKAPFLCMSITPEGETMNFLDPDGKIESSEDFVNAVQAGFLENDLIP 183

Query: 361 VNVSFMGKCHVVIEESLNFYGQSSSSSRDKGFMKVPSLGNVRGEE---CEDL----SGSP 203
           V+VSFMGK HVV+EE+L+F   +S   ++ GF +  S GNVR E+    ED+    SGSP
Sbjct: 184 VHVSFMGKNHVVVEENLSFTSLNSQEPKNTGFRRSSSSGNVRAEDIGVVEDMIGAESGSP 243

Query: 202 SSFPDGLMSEIYQHFANRTTPGGNGLSXXXXXXXXXXXXXXKMESEHFVKIVNCSPTPAR 23
            S PD  MSEIYQ+FANRT+PGG   S              K   EHFVKIVNCSPTP+R
Sbjct: 244 GSLPDRFMSEIYQYFANRTSPGGERASRRQRKREKARQGRRKWMPEHFVKIVNCSPTPSR 303

Query: 22  PVQGLWK 2
           P+QGLWK
Sbjct: 304 PLQGLWK 310


>emb|CAN72848.1| hypothetical protein VITISV_013938 [Vitis vinifera]
          Length = 469

 Score =  361 bits (927), Expect = 2e-97
 Identities = 181/307 (58%), Positives = 225/307 (73%), Gaps = 8/307 (2%)
 Frame = -3

Query: 898 MESNGITTFSFSDFPEDVQVCILSFLNQSELATFASTSKRFLSMCRHDPRLWFSMCDRRW 719
           + ++ +T+ SFSDFPEDVQ+CILSFL  SE+ATFA TSKRFLS+C  D +LWF++CDRRW
Sbjct: 4   LTTDAVTSVSFSDFPEDVQLCILSFLTPSEIATFACTSKRFLSLCTCDSKLWFTLCDRRW 63

Query: 718 GSITRINKWGNGKISYKHLYKTLHEYENLIGFWRRSG-TTLGSLKSPLVFFEWGPFYIMG 542
           GS T+I KWG+GKI+Y+ LY+TL E+ENLIGFWRRSG  TLG    PL+FFEW P +I+G
Sbjct: 64  GSKTQIKKWGSGKITYRLLYRTLIEWENLIGFWRRSGQVTLGVASPPLIFFEWCPSFIIG 123

Query: 541 SRVSPSKTGAYEVIKTPFLWISITSKGESMNYLDPDGNLELSESLVDSGELGILENEWTS 362
           SRVSPS+ G Y VIK PFL +SIT +GE+MN+LDPDG +E SE  V++ + G LEN+   
Sbjct: 124 SRVSPSRLGTYHVIKAPFLCMSITPEGETMNFLDPDGKIESSEDFVNAVQAGFLENDLIP 183

Query: 361 VNVSFMGKCHVVIEESLNFYGQSSSSSRDKGFMKVPSLGNVRGEE---CEDL----SGSP 203
           V+VSFMGK HVV+EE+L+F   +S   ++ GF +  S GNVR E+    ED+    SGSP
Sbjct: 184 VHVSFMGKNHVVVEENLSFTSLNSQEPKNTGFRRSSSSGNVRAEDIGVVEDMIGAESGSP 243

Query: 202 SSFPDGLMSEIYQHFANRTTPGGNGLSXXXXXXXXXXXXXXKMESEHFVKIVNCSPTPAR 23
            S PD  MSEIYQ+FANRT+PGG   S              K   EHFVKIVNCSPTP+R
Sbjct: 244 GSLPDRFMSEIYQYFANRTSPGGERASRRQRKREKARQGRRKWMPEHFVKIVNCSPTPSR 303

Query: 22  PVQGLWK 2
           P+QGLWK
Sbjct: 304 PLQGLWK 310


>ref|XP_004142896.1| PREDICTED: F-box protein At3g12350-like [Cucumis sativus]
           gi|449482721|ref|XP_004156384.1| PREDICTED: F-box
           protein At3g12350-like [Cucumis sativus]
          Length = 465

 Score =  334 bits (857), Expect = 2e-89
 Identities = 165/301 (54%), Positives = 216/301 (71%), Gaps = 9/301 (2%)
 Frame = -3

Query: 877 TFSFSDFPEDVQVCILSFLNQSELATFASTSKRFLSMCRHDPRLWFSMCDRRWGSITRIN 698
           +FSF+DFPEDVQ+CILSFL+ S++ATF+ TSKRF+S+CR+D +LWF+MCDR+WGS T+I 
Sbjct: 13  SFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTMCDRKWGSKTQIK 72

Query: 697 KWGNGKISYKHLYKTLHEYENLIGFWRRSGTTLGSLKS-PLVFFEWGPFYIMGSRVSPSK 521
            WG GKI+Y+ LYKTLH++ENLIGFWRRSG++  S+ S PLVFFEWGP ++ G RVSPSK
Sbjct: 73  NWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGPDFLAGCRVSPSK 132

Query: 520 TGAYEVIKTPFLWISITSKGESMNYLDPDGNLELSESLVDSGELGILENEWTSVNVSFMG 341
            G Y+V K+PFLW++++S+G++M++++ DG  E +    D GE    + +   +++SFMG
Sbjct: 133 NGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSDCDLIPIDLSFMG 192

Query: 340 KCHVVIEESLNFYGQSSSSSRDKGFMKVPSLGNVRGEE----CEDL----SGSPSSFPDG 185
           K H VIEE+L F   +S     KGF +  S  N+  E+      D+    SGSP S PD 
Sbjct: 193 KNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSRVESGSPGSLPDR 252

Query: 184 LMSEIYQHFANRTTPGGNGLSXXXXXXXXXXXXXXKMESEHFVKIVNCSPTPARPVQGLW 5
           LMSEIYQHFANRT+PGG+  S              K E EHFVKIVNCSPTP RP+QGLW
Sbjct: 253 LMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNCSPTPLRPLQGLW 312

Query: 4   K 2
           K
Sbjct: 313 K 313


>ref|XP_002301146.1| predicted protein [Populus trichocarpa] gi|222842872|gb|EEE80419.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  278 bits (710), Expect = 3e-72
 Identities = 155/298 (52%), Positives = 202/298 (67%), Gaps = 8/298 (2%)
 Frame = -3

Query: 871 SFSDFPEDVQVCILSFLNQSELATFASTSKRFLSMCRHDPRLWFSMCDRRWGSITRINKW 692
           SFSDFPEDVQ CILSFL+ +E+A FASTSKR+  +C+ D +LW S+CDRRWGS T+INKW
Sbjct: 8   SFSDFPEDVQFCILSFLSPTEIANFASTSKRYAPLCQSDSKLWHSLCDRRWGSKTQINKW 67

Query: 691 GNGKISYKHLYKTLHEYENLIGFWRRSGTT--LGSLKSP-LVFFEWGPFYIMGSRVSPSK 521
           GNG+ISYK LYKTL+++ENLIGFWRR G +    ++K P LVFFEWG  ++ G RVSPS+
Sbjct: 68  GNGQISYKLLYKTLNKWENLIGFWRRCGQSQQKETVKPPSLVFFEWGSSFLSGWRVSPSQ 127

Query: 520 TGAYEVIKTPFLWISITSKGESMNYLDPDGNLELSESLVDSGELGILENEWTSVNVSFMG 341
             AY VIK+PFLWISI+ +GE +NYLDP+G  +    L   GELG L+ +   VNV+F+G
Sbjct: 128 -NAYSVIKSPFLWISISPEGEIVNYLDPEG--QNKNKLF--GELGYLDMDVVPVNVNFIG 182

Query: 340 KCHVVIEESLNFYGQSSSSSRDKGFMKVPSLGNVRGEE-CEDL----SGSPSSFPDGLMS 176
             H  +EE++NF  + S SS           GN++GE+  ED+    SGS  S P+    
Sbjct: 183 DSHFSVEENVNFAYRRSLSS-----------GNLKGEDNGEDIVSVESGSTGSLPETF-- 229

Query: 175 EIYQHFANRTTPGGNGLSXXXXXXXXXXXXXXKMESEHFVKIVNCSPTPARPVQGLWK 2
           EIYQ++ANR +PG +                 + E+EHF+KIV+ SPT  RP+QGLWK
Sbjct: 230 EIYQYYANRMSPGADRAIRRQRRREKEKQGKKRWETEHFLKIVDSSPTLDRPLQGLWK 287


>gb|ABK92530.1| unknown [Populus trichocarpa]
          Length = 298

 Score =  278 bits (710), Expect = 3e-72
 Identities = 155/298 (52%), Positives = 202/298 (67%), Gaps = 8/298 (2%)
 Frame = -3

Query: 871 SFSDFPEDVQVCILSFLNQSELATFASTSKRFLSMCRHDPRLWFSMCDRRWGSITRINKW 692
           SFSDFPEDVQ CILSFL+ +E+A FASTSKR+  +C+ D +LW S+CDRRWGS T+INKW
Sbjct: 8   SFSDFPEDVQFCILSFLSPTEIANFASTSKRYAPLCQSDSKLWHSLCDRRWGSKTQINKW 67

Query: 691 GNGKISYKHLYKTLHEYENLIGFWRRSGTT--LGSLKSP-LVFFEWGPFYIMGSRVSPSK 521
           GNG+ISYK LYKTL+++ENLIGFWRR G +    ++K P LVFFEWG  ++ G RVSPS+
Sbjct: 68  GNGQISYKLLYKTLNKWENLIGFWRRCGQSQQKETVKPPSLVFFEWGSSFLSGWRVSPSQ 127

Query: 520 TGAYEVIKTPFLWISITSKGESMNYLDPDGNLELSESLVDSGELGILENEWTSVNVSFMG 341
             AY VIK+PFLWISI+ +GE +NYLDP+G  +    L   GELG L+ +   VNV+F+G
Sbjct: 128 -NAYSVIKSPFLWISISPEGEIVNYLDPEG--QNKNKLF--GELGYLDMDVVPVNVNFIG 182

Query: 340 KCHVVIEESLNFYGQSSSSSRDKGFMKVPSLGNVRGEE-CEDL----SGSPSSFPDGLMS 176
             H  +EE++NF  + S SS           GN++GE+  ED+    SGS  S P+    
Sbjct: 183 DSHFSVEENVNFAYRRSLSS-----------GNLKGEDNGEDIVSVESGSTGSLPETF-- 229

Query: 175 EIYQHFANRTTPGGNGLSXXXXXXXXXXXXXXKMESEHFVKIVNCSPTPARPVQGLWK 2
           EIYQ++ANR +PG +                 + E+EHF+KIV+ SPT  RP+QGLWK
Sbjct: 230 EIYQYYANRMSPGADRAIRRQRRREKEKQGKKRWETEHFLKIVDSSPTLDRPLQGLWK 287


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