BLASTX nr result

ID: Cephaelis21_contig00003865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00003865
         (847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528634.1| 60S ribosomal protein L24, putative [Ricinus...   167   2e-39
ref|XP_002283947.2| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma...   163   4e-38
emb|CBI30217.3| unnamed protein product [Vitis vinifera]              163   4e-38
ref|XP_004143295.1| PREDICTED: 60S ribosomal protein L24-like [C...   162   9e-38
ref|NP_001235068.1| uncharacterized protein LOC100499720 [Glycin...   162   9e-38

>ref|XP_002528634.1| 60S ribosomal protein L24, putative [Ricinus communis]
           gi|223531923|gb|EEF33737.1| 60S ribosomal protein L24,
           putative [Ricinus communis]
          Length = 186

 Score =  167 bits (424), Expect = 2e-39
 Identities = 88/113 (77%), Positives = 90/113 (79%)
 Frame = -1

Query: 847 SKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTRKPYSRSIVGATLEVIQK 668
           SKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTT+KPYSRSIVGATLEVIQK
Sbjct: 58  SKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQK 117

Query: 667 RRTEKAEVRDAAREAALREIXXXXXXXXXXXXXXXXXXXXKTQKAGGKGNVSR 509
           RRTEK EVRDAAREAALREI                    KTQKAGGK NV +
Sbjct: 118 RRTEKPEVRDAAREAALREIKERIKKTKDAKKAKKAEVMAKTQKAGGKANVPK 170


>ref|XP_002283947.2| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L24 [Vitis
           vinifera]
          Length = 198

 Score =  163 bits (413), Expect = 4e-38
 Identities = 86/113 (76%), Positives = 88/113 (77%)
 Frame = -1

Query: 847 SKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTRKPYSRSIVGATLEVIQK 668
           SKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRR T+KPYSRSIVGATLEVIQK
Sbjct: 69  SKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQK 128

Query: 667 RRTEKAEVRDAAREAALREIXXXXXXXXXXXXXXXXXXXXKTQKAGGKGNVSR 509
           RRTEKAEVRDAAREAALREI                    K QK  GKGNV +
Sbjct: 129 RRTEKAEVRDAAREAALREIKERIKKTKDEKKAKKAEVMAKVQKTQGKGNVPK 181


>emb|CBI30217.3| unnamed protein product [Vitis vinifera]
          Length = 165

 Score =  163 bits (413), Expect = 4e-38
 Identities = 86/113 (76%), Positives = 88/113 (77%)
 Frame = -1

Query: 847 SKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTRKPYSRSIVGATLEVIQK 668
           SKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRR T+KPYSRSIVGATLEVIQK
Sbjct: 36  SKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQK 95

Query: 667 RRTEKAEVRDAAREAALREIXXXXXXXXXXXXXXXXXXXXKTQKAGGKGNVSR 509
           RRTEKAEVRDAAREAALREI                    K QK  GKGNV +
Sbjct: 96  RRTEKAEVRDAAREAALREIKERIKKTKDEKKAKKAEVMAKVQKTQGKGNVPK 148


>ref|XP_004143295.1| PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus]
           gi|449523211|ref|XP_004168617.1| PREDICTED: 60S
           ribosomal protein L24-like [Cucumis sativus]
          Length = 164

 Score =  162 bits (410), Expect = 9e-38
 Identities = 85/113 (75%), Positives = 88/113 (77%)
 Frame = -1

Query: 847 SKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTRKPYSRSIVGATLEVIQK 668
           SKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRR T+KPYSRSIVGATLEVIQK
Sbjct: 36  SKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQK 95

Query: 667 RRTEKAEVRDAAREAALREIXXXXXXXXXXXXXXXXXXXXKTQKAGGKGNVSR 509
           +R+EK EVRDAAREAALREI                    KTQK  GKGNV R
Sbjct: 96  KRSEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVMAKTQKTQGKGNVGR 148


>ref|NP_001235068.1| uncharacterized protein LOC100499720 [Glycine max]
           gi|255626059|gb|ACU13374.1| unknown [Glycine max]
          Length = 164

 Score =  162 bits (410), Expect = 9e-38
 Identities = 84/113 (74%), Positives = 89/113 (78%)
 Frame = -1

Query: 847 SKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTRKPYSRSIVGATLEVIQK 668
           SKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAV+KRRR  +KPYSRSIVGATLEVIQK
Sbjct: 36  SKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVRKRRRAAKKPYSRSIVGATLEVIQK 95

Query: 667 RRTEKAEVRDAAREAALREIXXXXXXXXXXXXXXXXXXXXKTQKAGGKGNVSR 509
           +R EK EVRDAAREAALREI                    K+QKAGGKGNVS+
Sbjct: 96  KRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVASKSQKAGGKGNVSK 148


Top