BLASTX nr result

ID: Cephaelis21_contig00003467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00003467
         (984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284989.1| PREDICTED: proteasome subunit beta type-4 is...   403   e-110
ref|XP_004149546.1| PREDICTED: proteasome subunit beta type-4-li...   399   e-109
ref|XP_003620482.1| Proteasome subunit beta type [Medicago trunc...   398   e-108
ref|XP_002324245.1| predicted protein [Populus trichocarpa] gi|2...   397   e-108
gb|AFK35266.1| unknown [Medicago truncatula]                          396   e-108

>ref|XP_002284989.1| PREDICTED: proteasome subunit beta type-4 isoform 1 [Vitis
           vinifera] gi|297746225|emb|CBI16281.3| unnamed protein
           product [Vitis vinifera]
          Length = 245

 Score =  403 bits (1036), Expect = e-110
 Identities = 194/229 (84%), Positives = 208/229 (90%)
 Frame = -3

Query: 901 EAAFQRTQSPIVTGSSVIAIKYKDGILVAADMGGSYGSTLRYKCVERIKPVGKHSLIGAS 722
           +A  QRT  P VTG+SVI +KYKDGIL+AADMGGSYGSTLRYK VER+KP+GKHSL+GAS
Sbjct: 17  QADSQRTLYPYVTGTSVIGVKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGAS 76

Query: 721 GEISDFQEILRVLDELILNDNMWDDGNSLGPKEVHNYLVRVMYNRRNKFNPLWNSLVLGG 542
           GEISDFQEIL  LDELIL DNMWDDGNSLGPKEVH+YL RVMYNRRNKFNPLWNSLVLGG
Sbjct: 77  GEISDFQEILHYLDELILYDNMWDDGNSLGPKEVHSYLTRVMYNRRNKFNPLWNSLVLGG 136

Query: 541 VKNGQKYLGTVNMIGVHYEDNHVATGFGNHLAIPILRDEWREDLTFEDGVKLLEKCMRVL 362
           VKNGQKYLGTV+MIGVH+EDNHVATGFGNHLA PILRDEW EDL+FEDGVKLLEKCMRVL
Sbjct: 137 VKNGQKYLGTVSMIGVHFEDNHVATGFGNHLARPILRDEWHEDLSFEDGVKLLEKCMRVL 196

Query: 361 LYRDRTAVNKIQIAKITEEDATIYQPYALKTFWNLSAFQNPAAGAVGSW 215
           LYRDR+AVNK+QIAKITEE  TI QPY+LKTFW  SAFQNP  GA GSW
Sbjct: 197 LYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWGFSAFQNPTVGAEGSW 245


>ref|XP_004149546.1| PREDICTED: proteasome subunit beta type-4-like [Cucumis sativus]
          Length = 245

 Score =  399 bits (1024), Expect = e-109
 Identities = 191/244 (78%), Positives = 215/244 (88%)
 Frame = -3

Query: 946 SSAPATAQNSLLGSPEAAFQRTQSPIVTGSSVIAIKYKDGILVAADMGGSYGSTLRYKCV 767
           S + +   N  L  PEA  QRTQ P VTG+SV+AIKYKDGIL+ +D+GGSYGSTLRYK V
Sbjct: 2   SPSDSNQANHGLLCPEAPIQRTQYPYVTGTSVVAIKYKDGILMVSDLGGSYGSTLRYKSV 61

Query: 766 ERIKPVGKHSLIGASGEISDFQEILRVLDELILNDNMWDDGNSLGPKEVHNYLVRVMYNR 587
           ERIK +GKHSL+GASGEISDFQ++LR LD+LIL DNMWDDGN+LGPKE+H+YL RVMYNR
Sbjct: 62  ERIKAIGKHSLLGASGEISDFQQLLRDLDQLILYDNMWDDGNALGPKEIHSYLTRVMYNR 121

Query: 586 RNKFNPLWNSLVLGGVKNGQKYLGTVNMIGVHYEDNHVATGFGNHLAIPILRDEWREDLT 407
           RNKF+P WN+LVLGGVKNGQKYLGTVNMIGV +EDNHV TGFGNHLA PILRDEWREDLT
Sbjct: 122 RNKFDPYWNALVLGGVKNGQKYLGTVNMIGVTFEDNHVTTGFGNHLARPILRDEWREDLT 181

Query: 406 FEDGVKLLEKCMRVLLYRDRTAVNKIQIAKITEEDATIYQPYALKTFWNLSAFQNPAAGA 227
           FE+GVKLLEKCMRVLLYRDR+AVNK+QIAKITEE  TI QPY+LKTFWN SAF+NP +GA
Sbjct: 182 FEEGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYSAFENPTSGA 241

Query: 226 VGSW 215
            GSW
Sbjct: 242 EGSW 245


>ref|XP_003620482.1| Proteasome subunit beta type [Medicago truncatula]
           gi|355495497|gb|AES76700.1| Proteasome subunit beta type
           [Medicago truncatula] gi|388498504|gb|AFK37318.1|
           unknown [Medicago truncatula]
          Length = 232

 Score =  398 bits (1023), Expect = e-108
 Identities = 190/225 (84%), Positives = 207/225 (92%)
 Frame = -3

Query: 889 QRTQSPIVTGSSVIAIKYKDGILVAADMGGSYGSTLRYKCVERIKPVGKHSLIGASGEIS 710
           QRT  P VTGSSV+AIKYKDGIL+AADMGGSYGSTLRYK VER+KP+GKHSL+GASGEIS
Sbjct: 8   QRTLYPYVTGSSVVAIKYKDGILMAADMGGSYGSTLRYKSVERLKPIGKHSLLGASGEIS 67

Query: 709 DFQEILRVLDELILNDNMWDDGNSLGPKEVHNYLVRVMYNRRNKFNPLWNSLVLGGVKNG 530
           DFQEI+R LDELIL DNMWDDGNSLGPKEVHNYL RVMYNRRNKFNPLWNSLVLGGVK G
Sbjct: 68  DFQEIMRYLDELILIDNMWDDGNSLGPKEVHNYLTRVMYNRRNKFNPLWNSLVLGGVKKG 127

Query: 529 QKYLGTVNMIGVHYEDNHVATGFGNHLAIPILRDEWREDLTFEDGVKLLEKCMRVLLYRD 350
           QKYLGTV+MIGV+YEDNHVATG GNHLA PILRDEW E+LTFE+GVKLLEKCMRVLLYRD
Sbjct: 128 QKYLGTVSMIGVNYEDNHVATGLGNHLARPILRDEWNENLTFEEGVKLLEKCMRVLLYRD 187

Query: 349 RTAVNKIQIAKITEEDATIYQPYALKTFWNLSAFQNPAAGAVGSW 215
           R+AVNKIQI+KITEE AT+Y P++LKT+W  SAF+NP  GA GSW
Sbjct: 188 RSAVNKIQISKITEEGATVYPPFSLKTYWEFSAFKNPTVGAEGSW 232


>ref|XP_002324245.1| predicted protein [Populus trichocarpa] gi|222865679|gb|EEF02810.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  397 bits (1021), Expect = e-108
 Identities = 193/243 (79%), Positives = 213/243 (87%)
 Frame = -3

Query: 943 SAPATAQNSLLGSPEAAFQRTQSPIVTGSSVIAIKYKDGILVAADMGGSYGSTLRYKCVE 764
           S+  T QNSLL S E   QRTQ P VTGSSV+A+KYKDGIL+AADMGGSYGSTLRYK VE
Sbjct: 3   SSSETKQNSLLSS-EPGIQRTQYPYVTGSSVVALKYKDGILMAADMGGSYGSTLRYKSVE 61

Query: 763 RIKPVGKHSLIGASGEISDFQEILRVLDELILNDNMWDDGNSLGPKEVHNYLVRVMYNRR 584
           RIKPVGKHSLIGASGEISDFQEI+R LDE +LNDNMWDDGNSLGPKE+H+YL RVMYNRR
Sbjct: 62  RIKPVGKHSLIGASGEISDFQEIMRYLDEQVLNDNMWDDGNSLGPKEIHSYLTRVMYNRR 121

Query: 583 NKFNPLWNSLVLGGVKNGQKYLGTVNMIGVHYEDNHVATGFGNHLAIPILRDEWREDLTF 404
           NKF+PLWN+L+LGGVK GQK+LG V MIGV++E+NHVATGFGNH+A PILR EW E+LTF
Sbjct: 122 NKFDPLWNTLLLGGVKKGQKFLGMVTMIGVNFEENHVATGFGNHMAQPILRSEWHENLTF 181

Query: 403 EDGVKLLEKCMRVLLYRDRTAVNKIQIAKITEEDATIYQPYALKTFWNLSAFQNPAAGAV 224
           E+GV LLEKCMRVLLYRDR+AVNK QIAKITEE  TI QPYALKTFW   AF+NP AGA 
Sbjct: 182 EEGVALLEKCMRVLLYRDRSAVNKFQIAKITEEGVTISQPYALKTFWGFKAFENPTAGAE 241

Query: 223 GSW 215
           GSW
Sbjct: 242 GSW 244


>gb|AFK35266.1| unknown [Medicago truncatula]
          Length = 232

 Score =  396 bits (1017), Expect = e-108
 Identities = 188/228 (82%), Positives = 208/228 (91%)
 Frame = -3

Query: 898 AAFQRTQSPIVTGSSVIAIKYKDGILVAADMGGSYGSTLRYKCVERIKPVGKHSLIGASG 719
           A  QRT  P VTGSSV+AIKYKDGIL+A+DMGGSYGSTLRYK VER+KP+GKHSLIGASG
Sbjct: 5   AESQRTLYPYVTGSSVVAIKYKDGILMASDMGGSYGSTLRYKSVERVKPIGKHSLIGASG 64

Query: 718 EISDFQEILRVLDELILNDNMWDDGNSLGPKEVHNYLVRVMYNRRNKFNPLWNSLVLGGV 539
           EISDFQEI R LDELIL DNMWDDGNSLGPKEVHNYL RVMYNRRNKFNPLWNSLVLGGV
Sbjct: 65  EISDFQEIQRYLDELILTDNMWDDGNSLGPKEVHNYLTRVMYNRRNKFNPLWNSLVLGGV 124

Query: 538 KNGQKYLGTVNMIGVHYEDNHVATGFGNHLAIPILRDEWREDLTFEDGVKLLEKCMRVLL 359
           KNGQKYLGTVNMIG++YED+H+ATG GNHLA PILRDEW E+L+FE+GVKLLEKCMRVLL
Sbjct: 125 KNGQKYLGTVNMIGINYEDDHIATGLGNHLARPILRDEWHENLSFEEGVKLLEKCMRVLL 184

Query: 358 YRDRTAVNKIQIAKITEEDATIYQPYALKTFWNLSAFQNPAAGAVGSW 215
           YRDR+AVNKIQIAK+TEE AT++ P++LKT+W  SAF+NP  GA GSW
Sbjct: 185 YRDRSAVNKIQIAKMTEEGATMFPPFSLKTYWEFSAFKNPTVGAEGSW 232


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