BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00003461
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326311.1| predicted protein [Populus trichocarpa] gi|2...   147   2e-33
ref|NP_001067421.1| Os11g0194800 [Oryza sativa Japonica Group] g...   146   7e-33
ref|XP_003578831.1| PREDICTED: DNA-directed RNA polymerases I, I...   145   1e-32
ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, I...   145   2e-32
ref|NP_001066312.1| Os12g0180400 [Oryza sativa Japonica Group] g...   145   2e-32

>ref|XP_002326311.1| predicted protein [Populus trichocarpa]
           gi|224071453|ref|XP_002303467.1| predicted protein
           [Populus trichocarpa] gi|118486243|gb|ABK94963.1|
           unknown [Populus trichocarpa]
           gi|222833504|gb|EEE71981.1| predicted protein [Populus
           trichocarpa] gi|222840899|gb|EEE78446.1| predicted
           protein [Populus trichocarpa]
          Length = 71

 Score =  147 bits (372), Expect = 2e-33
 Identities = 69/71 (97%), Positives = 70/71 (98%)
 Frame = +1

Query: 58  MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 237
           MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 238 NYNTLEKSEGT 270
           NYNTLEKSEG+
Sbjct: 61  NYNTLEKSEGS 71


>ref|NP_001067421.1| Os11g0194800 [Oryza sativa Japonica Group]
           gi|62733950|gb|AAX96059.1| dna-directed rna polymerase
           ii 8.2 kda polypeptide (ec 2.7.7.6)(rpb10) (rp10)
           (abc10) [Oryza sativa Japonica Group]
           gi|77549069|gb|ABA91866.1| DNA-directed RNA polymerase
           II 8.2 kDa polypeptide, putative, expressed [Oryza
           sativa Japonica Group] gi|113644643|dbj|BAF27784.1|
           Os11g0194800 [Oryza sativa Japonica Group]
           gi|215766304|dbj|BAG98532.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 74

 Score =  146 bits (368), Expect = 7e-33
 Identities = 68/71 (95%), Positives = 70/71 (98%)
 Frame = +1

Query: 58  MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 237
           MIIPVRCFTCGKVIGNKWD+YLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1   MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 238 NYNTLEKSEGT 270
           NYNTLEK+E T
Sbjct: 61  NYNTLEKTETT 71


>ref|XP_003578831.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC5-like [Brachypodium distachyon]
          Length = 71

 Score =  145 bits (366), Expect = 1e-32
 Identities = 68/71 (95%), Positives = 69/71 (97%)
 Frame = +1

Query: 58  MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 237
           MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1   MIIPVRCFTCGKVIGNKWDHYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 238 NYNTLEKSEGT 270
           NYNTLEK+E T
Sbjct: 61  NYNTLEKTEAT 71


>ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC5 [Vitis vinifera] gi|297739069|emb|CBI28558.3|
           unnamed protein product [Vitis vinifera]
          Length = 71

 Score =  145 bits (365), Expect = 2e-32
 Identities = 68/69 (98%), Positives = 68/69 (98%)
 Frame = +1

Query: 58  MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 237
           MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 238 NYNTLEKSE 264
           NYNTLEKSE
Sbjct: 61  NYNTLEKSE 69


>ref|NP_001066312.1| Os12g0180400 [Oryza sativa Japonica Group]
           gi|113648819|dbj|BAF29331.1| Os12g0180400 [Oryza sativa
           Japonica Group]
          Length = 72

 Score =  145 bits (365), Expect = 2e-32
 Identities = 67/69 (97%), Positives = 69/69 (100%)
 Frame = +1

Query: 58  MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 237
           MIIPVRCFTCGKVIGNKWD+YLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1   MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 238 NYNTLEKSE 264
           NYNTLEK+E
Sbjct: 61  NYNTLEKTE 69