BLASTX nr result

ID: Cephaelis21_contig00003458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00003458
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]       161   5e-38
gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]       155   3e-36
gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]       155   4e-36
gb|ABB55369.1| histone deacetylase 2a-like [Solanum tuberosum]        149   2e-34
sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1; A...   149   2e-34

>gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]
          Length = 282

 Score =  161 bits (408), Expect = 5e-38
 Identities = 72/100 (72%), Positives = 86/100 (86%)
 Frame = +2

Query: 80  MEFWAVEVKSGEPVKVEPGEDMVLHLSQVSLGECRKEKGNESVCLFLNVDGKKLVLATLF 259
           MEFW  EVKSG+P+ V+PG+DMVLHLSQ SLGE +K+KG+E VCL +NVDGKKL L TL 
Sbjct: 1   MEFWGAEVKSGQPLTVQPGDDMVLHLSQASLGEAKKDKGSEPVCLSVNVDGKKLALGTLN 60

Query: 260 SDKLPQQQLDLVFDKDFELSHNWKNGNVYFYGYKTRSPFD 379
            DKLPQQQ DLVFD+DFELSHNWKNG+VYF+GYK  +P++
Sbjct: 61  LDKLPQQQFDLVFDRDFELSHNWKNGSVYFFGYKAANPYE 100


>gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]
          Length = 294

 Score =  155 bits (392), Expect = 3e-36
 Identities = 72/100 (72%), Positives = 86/100 (86%)
 Frame = +2

Query: 80  MEFWAVEVKSGEPVKVEPGEDMVLHLSQVSLGECRKEKGNESVCLFLNVDGKKLVLATLF 259
           MEFW  EVKSGEP+ V+PG+ MVLHLSQ SLGE +K+K  +SVCL +N+DGKKLVL TL 
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKV-QSVCLSVNIDGKKLVLGTLN 59

Query: 260 SDKLPQQQLDLVFDKDFELSHNWKNGNVYFYGYKTRSPFD 379
           SDK+PQQQ DLVFD+DFELSHNWKNG+VYF+GYK  +PF+
Sbjct: 60  SDKVPQQQFDLVFDRDFELSHNWKNGSVYFFGYKATNPFE 99


>gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]
          Length = 295

 Score =  155 bits (391), Expect = 4e-36
 Identities = 71/100 (71%), Positives = 86/100 (86%)
 Frame = +2

Query: 80  MEFWAVEVKSGEPVKVEPGEDMVLHLSQVSLGECRKEKGNESVCLFLNVDGKKLVLATLF 259
           MEFW  EVKSGEP+ V+PG+ MVLHLSQ SLGE +K+K  +SVCL +N+DGKKLVL TL 
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKA-QSVCLSVNIDGKKLVLGTLS 59

Query: 260 SDKLPQQQLDLVFDKDFELSHNWKNGNVYFYGYKTRSPFD 379
           SDK+PQQQ DLVFD+DFELSHNWK+G+VYF+GYK  +PF+
Sbjct: 60  SDKVPQQQFDLVFDRDFELSHNWKSGSVYFFGYKATNPFE 99


>gb|ABB55369.1| histone deacetylase 2a-like [Solanum tuberosum]
          Length = 203

 Score =  149 bits (377), Expect = 2e-34
 Identities = 70/100 (70%), Positives = 86/100 (86%)
 Frame = +2

Query: 80  MEFWAVEVKSGEPVKVEPGEDMVLHLSQVSLGECRKEKGNESVCLFLNVDGKKLVLATLF 259
           MEFW  EVKSGEP+ V+PG+ MVLHLSQ SLGE +K+K +ESVCL +N+DGKKLVL TL 
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDK-SESVCLSVNIDGKKLVLGTLN 59

Query: 260 SDKLPQQQLDLVFDKDFELSHNWKNGNVYFYGYKTRSPFD 379
           S+K+PQQQ DLVFD+DFELSHN K+G+VYF+GYK  +PF+
Sbjct: 60  SEKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFE 99


>sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1; AltName: Full=Histone
           deacetylase 2a; Short=HD2a; AltName: Full=ScHD2a
           gi|33667906|gb|AAQ24532.1| histone deacetylase [Solanum
           chacoense]
          Length = 269

 Score =  149 bits (377), Expect = 2e-34
 Identities = 70/100 (70%), Positives = 86/100 (86%)
 Frame = +2

Query: 80  MEFWAVEVKSGEPVKVEPGEDMVLHLSQVSLGECRKEKGNESVCLFLNVDGKKLVLATLF 259
           MEFW  EVKSGEP+ V+PG+ MVLHLSQ SLGE +K+K +ESVCL +N+DGKKLVL TL 
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDK-SESVCLSVNIDGKKLVLGTLN 59

Query: 260 SDKLPQQQLDLVFDKDFELSHNWKNGNVYFYGYKTRSPFD 379
           S+K+PQQQ DLVFD+DFELSHN K+G+VYF+GYK  +PF+
Sbjct: 60  SEKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFE 99