BLASTX nr result

ID: Cephaelis21_contig00003448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00003448
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155361.1| PREDICTED: signal recognition particle recep...    60   2e-07
ref|XP_004135257.1| PREDICTED: signal recognition particle recep...    60   2e-07
gb|ADN33824.1| signal recognition particle receptor subunit beta...    60   2e-07
gb|AFK36205.1| unknown [Lotus japonicus]                               59   5e-07
ref|XP_002873217.1| signal recognition particle binding protein ...    59   5e-07

>ref|XP_004155361.1| PREDICTED: signal recognition particle receptor subunit beta-like
           [Cucumis sativus]
          Length = 266

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = +2

Query: 11  TVKSCKLRDGSSHQGTVTSMEPNEGTFILHSELLK 115
           T+   +LRDGSSHQGTVTSMEPNEGTF+LHSE+ K
Sbjct: 76  TILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAK 110


>ref|XP_004135257.1| PREDICTED: signal recognition particle receptor subunit beta-like
           [Cucumis sativus]
          Length = 266

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = +2

Query: 11  TVKSCKLRDGSSHQGTVTSMEPNEGTFILHSELLK 115
           T+   +LRDGSSHQGTVTSMEPNEGTF+LHSE+ K
Sbjct: 76  TILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAK 110


>gb|ADN33824.1| signal recognition particle receptor subunit beta [Cucumis melo
           subsp. melo]
          Length = 266

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = +2

Query: 11  TVKSCKLRDGSSHQGTVTSMEPNEGTFILHSELLK 115
           T+   +LRDGSSHQGTVTSMEPNEGTF+LHSE+ K
Sbjct: 76  TILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAK 110


>gb|AFK36205.1| unknown [Lotus japonicus]
          Length = 259

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = +2

Query: 11  TVKSCKLRDGSSHQGTVTSMEPNEGTFILHSELLK 115
           TV   +LRDGS+HQGTVTSMEPNEGTFILHSE  K
Sbjct: 69  TVLFYQLRDGSTHQGTVTSMEPNEGTFILHSETTK 103


>ref|XP_002873217.1| signal recognition particle binding protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319054|gb|EFH49476.1| signal
           recognition particle binding protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 260

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = +2

Query: 11  TVKSCKLRDGSSHQGTVTSMEPNEGTFILHSELLK 115
           TV   +LRDGSSHQGTVTSMEPNEGTF+LHSE  K
Sbjct: 70  TVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSENTK 104